RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 NRG2O14511 850 aaPredicted RBP13.03□□□□□ -0.32
CHD1-204ENST00000505982 TMUB1Q9BVT8 246 aa13.02□□□□□ -0.33
CHD1-204ENST00000505982 ZPR1O75312 459 aa13.01□□□□□ -0.33
CHD1-204ENST00000505982 PTGDRQ13258 359 aa13.01□□□□□ -0.33
CHD1-204ENST00000505982 KCNV2Q8TDN2 545 aa13.01□□□□□ -0.33
CHD1-204ENST00000505982 DNAJB2P25686 324 aa13□□□□□ -0.33
CHD1-204ENST00000505982 RBM46Q8TBY0 533 aaKnown RBP13□□□□□ -0.33
CHD1-204ENST00000505982 PCDHB3Q9Y5E6 796 aa13□□□□□ -0.33
CHD1-204ENST00000505982 LCE2BO14633 110 aa12.96□□□□□ -0.33
CHD1-204ENST00000505982 NUTM2FA1L443 756 aa12.95□□□□□ -0.34
CHD1-204ENST00000505982 PDZRN3Q9UPQ7 1066 aa12.95□□□□□ -0.34
CHD1-204ENST00000505982 ADGRG1Q9Y653 693 aa12.95□□□□□ -0.34
CHD1-204ENST00000505982 TMEM134Q9H6X4 195 aa12.94□□□□□ -0.34
CHD1-204ENST00000505982 BLOC1S3Q6QNY0 202 aa12.93□□□□□ -0.34
CHD1-204ENST00000505982 KMT5BQ4FZB7 885 aa12.92□□□□□ -0.34
CHD1-204ENST00000505982 RCCD1A6NED2 376 aa12.91□□□□□ -0.34
CHD1-204ENST00000505982 P3H3Q8IVL6 736 aa12.91□□□□□ -0.34
CHD1-204ENST00000505982 ACTN4O43707 911 aaKnown RBP12.89□□□□□ -0.35
CHD1-204ENST00000505982 FCHSD2O94868 740 aa12.88□□□□□ -0.35
CHD1-204ENST00000505982 RNF223E7ERA6 249 aa12.87□□□□□ -0.35
CHD1-204ENST00000505982 SLC19A1P41440 591 aa12.86□□□□□ -0.35
CHD1-204ENST00000505982 FAM161AQ3B820 660 aa12.86□□□□□ -0.35
CHD1-204ENST00000505982 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.85□□□□□ -0.35
CHD1-204ENST00000505982 CFHP08603 1231 aa12.85□□□□□ -0.35
CHD1-204ENST00000505982 TLL1O43897 1013 aa12.83□□□□□ -0.36
CHD1-204ENST00000505982 OATP04181 439 aa12.83□□□□□ -0.36
CHD1-204ENST00000505982 SEMA3EO15041 775 aa12.82□□□□□ -0.36
CHD1-204ENST00000505982 ANKLE1Q8NAG6 615 aa12.82□□□□□ -0.36
CHD1-204ENST00000505982 NR1I2O75469 434 aa12.81□□□□□ -0.36
CHD1-204ENST00000505982 SLC10A3P09131 477 aa12.8□□□□□ -0.36
CHD1-204ENST00000505982 RSPH4AQ5TD94 716 aa12.8□□□□□ -0.36
CHD1-204ENST00000505982 S1PR4O95977 384 aa12.79□□□□□ -0.36
CHD1-204ENST00000505982 SPRYD7Q5W111 196 aa12.79□□□□□ -0.36
CHD1-204ENST00000505982 ZNF787Q6DD87 383 aa12.79□□□□□ -0.36
CHD1-204ENST00000505982 PXYLP1Q8TE99 480 aa12.79□□□□□ -0.36
CHD1-204ENST00000505982 ZNF598Q86UK7 904 aaKnown RBP12.78□□□□□ -0.36
CHD1-204ENST00000505982 PPEF1O14829 653 aaPredicted RBP12.77□□□□□ -0.37
CHD1-204ENST00000505982 ADH1BP00325 375 aa12.77□□□□□ -0.37
CHD1-204ENST00000505982 HIC1Q14526 733 aa12.77□□□□□ -0.37
CHD1-204ENST00000505982 EMID1Q96A84 441 aaPredicted RBP12.77□□□□□ -0.37
CHD1-204ENST00000505982 TRIM67Q6ZTA4 783 aa12.76□□□□□ -0.37
CHD1-204ENST00000505982 PKDCCQ504Y2 493 aa12.74□□□□□ -0.37
CHD1-204ENST00000505982 SMYD5Q6GMV2 418 aa12.74□□□□□ -0.37
CHD1-204ENST00000505982 SLC6A16Q9GZN6 736 aa12.74□□□□□ -0.37
CHD1-204ENST00000505982 PRR20EP86478 221 aa12.73□□□□□ -0.37
CHD1-204ENST00000505982 PRR20CP86479 221 aa12.73□□□□□ -0.37
CHD1-204ENST00000505982 PRR20DP86480 221 aa12.73□□□□□ -0.37
CHD1-204ENST00000505982 PRR20BP86481 221 aa12.73□□□□□ -0.37
CHD1-204ENST00000505982 PRR20AP86496 221 aa12.73□□□□□ -0.37
CHD1-204ENST00000505982 METTL3Q86U44 580 aaKnown RBP12.73□□□□□ -0.37
CHD1-204ENST00000505982 SCUBE3Q8IX30 993 aa12.73□□□□□ -0.37
CHD1-204ENST00000505982 LIAT1Q6ZQX7 453 aa12.72□□□□□ -0.37
CHD1-204ENST00000505982 DGAT1O75907 488 aa12.71□□□□□ -0.37
CHD1-204ENST00000505982 ZNF697Q5TEC3 545 aa12.71□□□□□ -0.37
CHD1-204ENST00000505982 RBM26Q5T8P6 1007 aaKnown RBP12.69□□□□□ -0.38
CHD1-204ENST00000505982 TESPA1A2RU30 521 aaPredicted RBP12.68□□□□□ -0.38
CHD1-204ENST00000505982 PUS10Q3MIT2 529 aaKnown RBP12.68□□□□□ -0.38
CHD1-204ENST00000505982 SPSB2Q99619 263 aa12.68□□□□□ -0.38
CHD1-204ENST00000505982 GNPATO15228 680 aa12.67□□□□□ -0.38
CHD1-204ENST00000505982 DAXXQ9UER7 740 aaPredicted RBP12.66□□□□□ -0.38
CHD1-204ENST00000505982 GDF9O60383 454 aa12.65□□□□□ -0.38
CHD1-204ENST00000505982 MYT1Q01538 1121 aa12.65□□□□□ -0.38
CHD1-204ENST00000505982 RDH13Q8NBN7 331 aa12.64□□□□□ -0.39
CHD1-204ENST00000505982 TNFRSF10AO00220 468 aa12.63□□□□□ -0.39
CHD1-204ENST00000505982 PLA2G2CQ5R387 149 aa12.63□□□□□ -0.39
CHD1-204ENST00000505982 FAM187AA6NFU0 413 aa12.62□□□□□ -0.39
CHD1-204ENST00000505982 FECHP22830 423 aa12.62□□□□□ -0.39
CHD1-204ENST00000505982 ZNF775Q96BV0 537 aaPredicted RBP12.61□□□□□ -0.39
CHD1-204ENST00000505982 DDX11L8A8MPP1 907 aa12.6□□□□□ -0.39
CHD1-204ENST00000505982 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
CHD1-204ENST00000505982 MORN1Q5T089 497 aa12.59□□□□□ -0.39
CHD1-204ENST00000505982 SULF1Q8IWU6 871 aa12.59□□□□□ -0.39
CHD1-204ENST00000505982 TULP1O00294 542 aaPredicted RBP12.58□□□□□ -0.4
CHD1-204ENST00000505982 FUT2Q10981 343 aa12.58□□□□□ -0.4
CHD1-204ENST00000505982 LMOD2Q6P5Q4 547 aa12.58□□□□□ -0.4
CHD1-204ENST00000505982 GPR37O15354 613 aa12.57□□□□□ -0.4
CHD1-204ENST00000505982 RPIAP49247 311 aa12.57□□□□□ -0.4
CHD1-204ENST00000505982 FMNL1O95466 1100 aaPredicted RBP12.56□□□□□ -0.4
CHD1-204ENST00000505982 CD2BP2O95400 341 aaKnown RBP12.55□□□□□ -0.4
CHD1-204ENST00000505982 GCGRP47871 477 aa12.55□□□□□ -0.4
CHD1-204ENST00000505982 FOXC1Q12948 553 aa12.55□□□□□ -0.4
CHD1-204ENST00000505982 THAP11Q96EK4 314 aa12.55□□□□□ -0.4
CHD1-204ENST00000505982 SLC27A5Q9Y2P5 690 aa12.54□□□□□ -0.4
CHD1-204ENST00000505982 NLRP7Q8WX94 980 aa12.53□□□□□ -0.4
CHD1-204ENST00000505982 PKD2L1Q9P0L9 805 aa12.53□□□□□ -0.4
CHD1-204ENST00000505982 FCF1Q9Y324 198 aaKnown RBP12.53□□□□□ -0.4
CHD1-204ENST00000505982 SALL2Q9Y467 1007 aaPredicted RBP12.53□□□□□ -0.4
CHD1-204ENST00000505982 GRIPAP1Q4V328 841 aa12.51□□□□□ -0.41
CHD1-204ENST00000505982 POTECB2RU33 542 aa12.5□□□□□ -0.41
CHD1-204ENST00000505982 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHD1-204ENST00000505982 FAM160A2Q8N612 972 aaPredicted RBP12.5□□□□□ -0.41
CHD1-204ENST00000505982 AAASQ9NRG9 546 aa12.5□□□□□ -0.41
CHD1-204ENST00000505982 GPIHBP1Q8IV16 184 aa12.49□□□□□ -0.41
CHD1-204ENST00000505982 PHOX2BQ99453 314 aa12.49□□□□□ -0.41
CHD1-204ENST00000505982 BRICD5Q6PL45 260 aa12.48□□□□□ -0.41
CHD1-204ENST00000505982 ST8SIA5O15466 376 aa12.47□□□□□ -0.41
CHD1-204ENST00000505982 ZBTB24O43167 697 aaPredicted RBP12.47□□□□□ -0.41
CHD1-204ENST00000505982 CYP4X1Q8N118 509 aa12.46□□□□□ -0.41
CHD1-204ENST00000505982 MSS51Q4VC12 460 aa12.45□□□□□ -0.42
CHD1-204ENST00000505982 TOR4AQ9NXH8 423 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms