RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 NLRP7Q8WX94 980 aa10.35□□□□□ -0.75
LINC00616-202ENST00000505874 NECTIN2Q92692 538 aa10.34□□□□□ -0.75
LINC00616-202ENST00000505874 IFFO2Q5TF58 517 aa10.33□□□□□ -0.76
LINC00616-202ENST00000505874 LMOD2Q6P5Q4 547 aa10.33□□□□□ -0.76
LINC00616-202ENST00000505874 KCNC4Q03721 635 aa10.32□□□□□ -0.76
LINC00616-202ENST00000505874 MTRQ99707 1265 aa10.32□□□□□ -0.76
LINC00616-202ENST00000505874 TJAP1Q5JTD0 557 aa10.3□□□□□ -0.76
LINC00616-202ENST00000505874 PHOX2BQ99453 314 aa10.3□□□□□ -0.76
LINC00616-202ENST00000505874 A0A0G2JS52 829 aa10.29□□□□□ -0.76
LINC00616-202ENST00000505874 MAP2K5Q13163 448 aa10.29□□□□□ -0.76
LINC00616-202ENST00000505874 CFHP08603 1231 aa10.28□□□□□ -0.76
LINC00616-202ENST00000505874 SLC10A3P09131 477 aa10.28□□□□□ -0.76
LINC00616-202ENST00000505874 COPS2P61201 443 aa10.28□□□□□ -0.76
LINC00616-202ENST00000505874 IL21Q9HBE4 155 aa10.27□□□□□ -0.77
LINC00616-202ENST00000505874 SLC24A1O60721 1099 aa10.26□□□□□ -0.77
LINC00616-202ENST00000505874 ZNF516Q92618 1163 aa10.26□□□□□ -0.77
LINC00616-202ENST00000505874 PRR14Q9BWN1 585 aa10.26□□□□□ -0.77
LINC00616-202ENST00000505874 DAXXQ9UER7 740 aaPredicted RBP10.26□□□□□ -0.77
LINC00616-202ENST00000505874 IRF6O14896 467 aa10.25□□□□□ -0.77
LINC00616-202ENST00000505874 KMT5BQ4FZB7 885 aa10.25□□□□□ -0.77
LINC00616-202ENST00000505874 PCDHB3Q9Y5E6 796 aa10.25□□□□□ -0.77
LINC00616-202ENST00000505874 DDX11L8A8MPP1 907 aa10.24□□□□□ -0.77
LINC00616-202ENST00000505874 RDH13Q8NBN7 331 aa10.24□□□□□ -0.77
LINC00616-202ENST00000505874 MINK1Q8N4C8 1332 aaPredicted RBP10.24□□□□□ -0.77
LINC00616-202ENST00000505874 RSPH4AQ5TD94 716 aa10.23□□□□□ -0.77
LINC00616-202ENST00000505874 CCDC102AQ96A19 550 aa10.23□□□□□ -0.77
LINC00616-202ENST00000505874 ACTN4O43707 911 aaKnown RBP10.22□□□□□ -0.77
LINC00616-202ENST00000505874 BLOC1S3Q6QNY0 202 aa10.22□□□□□ -0.77
LINC00616-202ENST00000505874 NKX2-3Q8TAU0 364 aa10.21□□□□□ -0.77
LINC00616-202ENST00000505874 ZC3H15Q8WU90 426 aaKnown RBP10.21□□□□□ -0.77
LINC00616-202ENST00000505874 KRI1Q8N9T8 703 aaKnown RBP10.2□□□□□ -0.78
LINC00616-202ENST00000505874 MDM2Q00987 491 aaPredicted RBP10.19□□□□□ -0.78
LINC00616-202ENST00000505874 ZPR1O75312 459 aa10.18□□□□□ -0.78
LINC00616-202ENST00000505874 SULF1Q8IWU6 871 aa10.18□□□□□ -0.78
LINC00616-202ENST00000505874 ZMYND10O75800 440 aa10.17□□□□□ -0.78
LINC00616-202ENST00000505874 BARGINQ6ZT62 677 aa10.17□□□□□ -0.78
LINC00616-202ENST00000505874 TLL1O43897 1013 aa10.16□□□□□ -0.78
LINC00616-202ENST00000505874 PUS10Q3MIT2 529 aaKnown RBP10.16□□□□□ -0.78
LINC00616-202ENST00000505874 RGS20O76081 388 aa10.15□□□□□ -0.78
LINC00616-202ENST00000505874 PPP1R18Q6NYC8 613 aa10.14□□□□□ -0.79
LINC00616-202ENST00000505874 NR1I2O75469 434 aa10.13□□□□□ -0.79
LINC00616-202ENST00000505874 GCGRP47871 477 aa10.13□□□□□ -0.79
LINC00616-202ENST00000505874 FUT2Q10981 343 aa10.13□□□□□ -0.79
LINC00616-202ENST00000505874 CLCN1P35523 988 aa10.11□□□□□ -0.79
LINC00616-202ENST00000505874 GPCPD1Q9NPB8 672 aa10.11□□□□□ -0.79
LINC00616-202ENST00000505874 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.11□□□□□ -0.79
LINC00616-202ENST00000505874 SCUBE3Q8IX30 993 aa10.1□□□□□ -0.79
LINC00616-202ENST00000505874 CD46P15529 392 aa10.09□□□□□ -0.79
LINC00616-202ENST00000505874 GGCXP38435 758 aa10.09□□□□□ -0.79
LINC00616-202ENST00000505874 ATP6V1AP38606 617 aa10.09□□□□□ -0.79
LINC00616-202ENST00000505874 MORN1Q5T089 497 aa10.08□□□□□ -0.8
LINC00616-202ENST00000505874 BCANQ96GW7 911 aa10.08□□□□□ -0.8
LINC00616-202ENST00000505874 TTLL12Q14166 644 aaPredicted RBP10.07□□□□□ -0.8
LINC00616-202ENST00000505874 TMUB1Q9BVT8 246 aa10.07□□□□□ -0.8
LINC00616-202ENST00000505874 REPIN1Q9BWE0 567 aaKnown RBP10.07□□□□□ -0.8
LINC00616-202ENST00000505874 FAM217BQ9NTX9 383 aaPredicted RBP10.07□□□□□ -0.8
LINC00616-202ENST00000505874 S1PR4O95977 384 aa10.06□□□□□ -0.8
LINC00616-202ENST00000505874 ADH1BP00325 375 aa10.06□□□□□ -0.8
LINC00616-202ENST00000505874 PRKD2Q9BZL6 878 aa10.05□□□□□ -0.8
LINC00616-202ENST00000505874 SLC27A5Q9Y2P5 690 aa10.05□□□□□ -0.8
LINC00616-202ENST00000505874 KDM4AO75164 1064 aa10.04□□□□□ -0.8
LINC00616-202ENST00000505874 SPSB2Q99619 263 aa10.04□□□□□ -0.8
LINC00616-202ENST00000505874 RNF223E7ERA6 249 aa10.03□□□□□ -0.8
LINC00616-202ENST00000505874 PPEF1O14829 653 aaPredicted RBP10.03□□□□□ -0.8
LINC00616-202ENST00000505874 AMHR2Q16671 573 aa10.03□□□□□ -0.8
LINC00616-202ENST00000505874 GRIPAP1Q4V328 841 aa10.03□□□□□ -0.8
LINC00616-202ENST00000505874 TRIM66O15016 1216 aa10.02□□□□□ -0.81
LINC00616-202ENST00000505874 AK7Q96M32 723 aa10.02□□□□□ -0.81
LINC00616-202ENST00000505874 SLC6A16Q9GZN6 736 aa10.02□□□□□ -0.81
LINC00616-202ENST00000505874 SSTR3P32745 418 aaPredicted RBP10.01□□□□□ -0.81
LINC00616-202ENST00000505874 HLA-CQ95604 372 aa10.01□□□□□ -0.81
LINC00616-202ENST00000505874 THAP11Q96EK4 314 aa10.01□□□□□ -0.81
LINC00616-202ENST00000505874 IRX2Q9BZI1 471 aaPredicted RBP10.01□□□□□ -0.81
LINC00616-202ENST00000505874 FMNL1O95466 1100 aaPredicted RBP10□□□□□ -0.81
LINC00616-202ENST00000505874 GIGYF2Q6Y7W6 1299 aaKnown RBP10□□□□□ -0.81
LINC00616-202ENST00000505874 SLC24A3Q9HC58 644 aa10□□□□□ -0.81
LINC00616-202ENST00000505874 RNF19BQ6ZMZ0 732 aa9.99□□□□□ -0.81
LINC00616-202ENST00000505874 USP46P62068 366 aa9.98□□□□□ -0.81
LINC00616-202ENST00000505874 BRICD5Q6PL45 260 aa9.98□□□□□ -0.81
LINC00616-202ENST00000505874 NUTM1Q86Y26 1132 aa9.98□□□□□ -0.81
LINC00616-202ENST00000505874 PARP9Q8IXQ6 854 aa9.98□□□□□ -0.81
LINC00616-202ENST00000505874 ANKLE1Q8NAG6 615 aa9.98□□□□□ -0.81
LINC00616-202ENST00000505874 HOXA2O43364 376 aa9.97□□□□□ -0.81
LINC00616-202ENST00000505874 GUCA2AQ02747 115 aa9.97□□□□□ -0.81
LINC00616-202ENST00000505874 V9GY48 417 aaPredicted RBP9.97□□□□□ -0.81
LINC00616-202ENST00000505874 Q3C1V9 767 aa9.96□□□□□ -0.82
LINC00616-202ENST00000505874 FAM160A2Q8N612 972 aaPredicted RBP9.96□□□□□ -0.82
LINC00616-202ENST00000505874 PRDM9Q9NQV7 894 aa9.96□□□□□ -0.82
LINC00616-202ENST00000505874 SALL2Q9Y467 1007 aaPredicted RBP9.96□□□□□ -0.82
LINC00616-202ENST00000505874 SLC19A1P41440 591 aa9.94□□□□□ -0.82
LINC00616-202ENST00000505874 EMID1Q96A84 441 aaPredicted RBP9.94□□□□□ -0.82
LINC00616-202ENST00000505874 BEGAINQ9BUH8 593 aa9.94□□□□□ -0.82
LINC00616-202ENST00000505874 PDE4DQ08499 809 aa9.93□□□□□ -0.82
LINC00616-202ENST00000505874 PLA2G2CQ5R387 149 aa9.93□□□□□ -0.82
LINC00616-202ENST00000505874 MS4A1P11836 297 aa9.92□□□□□ -0.82
LINC00616-202ENST00000505874 SPIRE2Q8WWL2 714 aa9.92□□□□□ -0.82
LINC00616-202ENST00000505874 MSS51Q4VC12 460 aa9.91□□□□□ -0.82
LINC00616-202ENST00000505874 LIAT1Q6ZQX7 453 aa9.91□□□□□ -0.82
LINC00616-202ENST00000505874 SYMPKQ92797 1274 aaKnown RBP9.91□□□□□ -0.82
LINC00616-202ENST00000505874 FCF1Q9Y324 198 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms