RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 TOM1L2Q6ZVM7 507 aa6.42□□□□□ -1.38
MATR3-211ENST00000505625 SPINK5Q9NQ38 1064 aaPredicted RBP6.42□□□□□ -1.38
MATR3-211ENST00000505625 H3BQV1 296 aa6.42□□□□□ -1.38
MATR3-211ENST00000505625 IFFO2Q5TF58 517 aa6.42□□□□□ -1.38
MATR3-211ENST00000505625 UQCRHP07919 91 aa6.41□□□□□ -1.38
MATR3-211ENST00000505625 CCAR2Q8N163 923 aaKnown RBP6.41□□□□□ -1.38
MATR3-211ENST00000505625 NAP1L1P55209 391 aaKnown RBP6.41□□□□□ -1.38
MATR3-211ENST00000505625 TRAK1Q9UPV9 953 aa6.41□□□□□ -1.38
MATR3-211ENST00000505625 RRP12Q5JTH9 1297 aaKnown RBP6.41□□□□□ -1.38
MATR3-211ENST00000505625 SKIDA1Q1XH10 827 aa6.41□□□□□ -1.38
MATR3-211ENST00000505625 BBXQ8WY36 941 aaPredicted RBP6.41□□□□□ -1.38
MATR3-211ENST00000505625 C9orf78Q9NZ63 289 aaPredicted RBP6.41□□□□□ -1.38
MATR3-211ENST00000505625 NACADO15069 1562 aa6.4□□□□□ -1.38
MATR3-211ENST00000505625 HNRNPMP52272 730 aaKnown RBP eCLIP6.4□□□□□ -1.38
MATR3-211ENST00000505625 CCNB3Q8WWL7 1395 aa6.4□□□□□ -1.38
MATR3-211ENST00000505625 TSR1Q2NL82 804 aaKnown RBP6.4□□□□□ -1.39
MATR3-211ENST00000505625 UQCRHLA0A096LP55 91 aa6.4□□□□□ -1.39
MATR3-211ENST00000505625 CCDC146Q8IYE0 955 aa6.4□□□□□ -1.39
MATR3-211ENST00000505625 RAPGEF4Q8WZA2 1011 aa6.4□□□□□ -1.39
MATR3-211ENST00000505625 CHMP4BQ9H444 224 aaKnown RBP6.4□□□□□ -1.39
MATR3-211ENST00000505625 UBAP1LF5GYI3 381 aa6.39□□□□□ -1.39
MATR3-211ENST00000505625 GLIPR1L2Q4G1C9 344 aa6.39□□□□□ -1.39
MATR3-211ENST00000505625 HOMER1Q86YM7 354 aa6.39□□□□□ -1.39
MATR3-211ENST00000505625 ZNF622Q969S3 477 aaKnown RBP eCLIP6.39□□□□□ -1.392e-13■□□□□ 9.5
MATR3-211ENST00000505625 ELL2O00472 640 aaPredicted RBP6.39□□□□□ -1.39
MATR3-211ENST00000505625 ATXN8OSP0DMR3 200 aa6.39□□□□□ -1.39
MATR3-211ENST00000505625 HSCBQ8IWL3 235 aa6.39□□□□□ -1.39
MATR3-211ENST00000505625 RSF1Q96T23 1441 aaPredicted RBP6.39□□□□□ -1.39
MATR3-211ENST00000505625 NEXNQ0ZGT2 675 aa6.39□□□□□ -1.39
MATR3-211ENST00000505625 TRIM29Q14134 588 aa6.39□□□□□ -1.39
MATR3-211ENST00000505625 MINK1Q8N4C8 1332 aaPredicted RBP6.38□□□□□ -1.39
MATR3-211ENST00000505625 NEUROD6Q96NK8 337 aa6.38□□□□□ -1.39
MATR3-211ENST00000505625 BCL2L13Q9BXK5 485 aa6.38□□□□□ -1.39
MATR3-211ENST00000505625 RIC3Q7Z5B4 369 aa6.38□□□□□ -1.39
MATR3-211ENST00000505625 NAP1L5Q96NT1 182 aaPredicted RBP6.38□□□□□ -1.39
MATR3-211ENST00000505625 MYCP01106 439 aaPredicted RBP6.38□□□□□ -1.39
MATR3-211ENST00000505625 CCDC34Q96HJ3 373 aa6.38□□□□□ -1.39
MATR3-211ENST00000505625 TPM3P06753 285 aa6.38□□□□□ -1.39
MATR3-211ENST00000505625 FAM184AQ8NB25 1140 aa6.38□□□□□ -1.39
MATR3-211ENST00000505625 STK25O00506 426 aa6.38□□□□□ -1.39
MATR3-211ENST00000505625 NUTM1Q86Y26 1132 aa6.38□□□□□ -1.39
MATR3-211ENST00000505625 ZHX3Q9H4I2 956 aa6.38□□□□□ -1.39
MATR3-211ENST00000505625 ZNF710Q8N1W2 664 aa6.37□□□□□ -1.39
MATR3-211ENST00000505625 GPR162Q16538 588 aa6.37□□□□□ -1.39
MATR3-211ENST00000505625 COG3Q96JB2 828 aa6.37□□□□□ -1.39
MATR3-211ENST00000505625 TRMT1LQ7Z2T5 733 aaKnown RBP6.37□□□□□ -1.39
MATR3-211ENST00000505625 NOP2P46087 812 aaKnown RBP6.37□□□□□ -1.39
MATR3-211ENST00000505625 PIBF1Q8WXW3 757 aa6.37□□□□□ -1.39
MATR3-211ENST00000505625 RRP7AQ9Y3A4 280 aaKnown RBP6.37□□□□□ -1.39
MATR3-211ENST00000505625 ZPR1O75312 459 aa6.36□□□□□ -1.39
MATR3-211ENST00000505625 LIG1P18858 919 aa6.36□□□□□ -1.39
MATR3-211ENST00000505625 C8orf37Q96NL8 207 aa6.36□□□□□ -1.39
MATR3-211ENST00000505625 WASHC4Q2M389 1173 aa6.36□□□□□ -1.39
MATR3-211ENST00000505625 GOLGA6L1Q8N7Z2 621 aa6.36□□□□□ -1.39
MATR3-211ENST00000505625 RBM26Q5T8P6 1007 aaKnown RBP6.36□□□□□ -1.39
MATR3-211ENST00000505625 PMFBP1Q8TBY8 1022 aa6.36□□□□□ -1.39
MATR3-211ENST00000505625 AIDAQ96BJ3 306 aa6.36□□□□□ -1.39
MATR3-211ENST00000505625 CNNM1Q9NRU3 951 aa6.36□□□□□ -1.39
MATR3-211ENST00000505625 ABTB2Q8N961 1025 aa6.35□□□□□ -1.39
MATR3-211ENST00000505625 ADRA2BP18089 450 aa6.35□□□□□ -1.39
MATR3-211ENST00000505625 TERF2IPQ9NYB0 399 aa6.35□□□□□ -1.39
MATR3-211ENST00000505625 EAPPQ56P03 285 aaPredicted RBP6.35□□□□□ -1.39
MATR3-211ENST00000505625 HSP90AB4PQ58FF6 505 aa6.35□□□□□ -1.39
MATR3-211ENST00000505625 ANKRD62A6NC57 917 aa6.35□□□□□ -1.39
MATR3-211ENST00000505625 KRT18P05783 430 aaKnown RBP6.35□□□□□ -1.39
MATR3-211ENST00000505625 ANKIB1Q9P2G1 1089 aa6.35□□□□□ -1.39
MATR3-211ENST00000505625 HTATSF1O43719 755 aaKnown RBP6.34□□□□□ -1.39
MATR3-211ENST00000505625 MRPS9P82933 396 aaKnown RBP6.34□□□□□ -1.39
MATR3-211ENST00000505625 SLC4A8Q2Y0W8 1093 aa6.34□□□□□ -1.39
MATR3-211ENST00000505625 MS4A1P11836 297 aa6.34□□□□□ -1.39
MATR3-211ENST00000505625 CALD1Q05682 793 aaKnown RBP6.34□□□□□ -1.39
MATR3-211ENST00000505625 SMC4Q9NTJ3 1288 aa6.34□□□□□ -1.39
MATR3-211ENST00000505625 ROCK2O75116 1388 aaKnown RBP6.34□□□□□ -1.39
MATR3-211ENST00000505625 ZNF76P36508 570 aa6.34□□□□□ -1.39
MATR3-211ENST00000505625 USP5P45974 858 aa6.34□□□□□ -1.39
MATR3-211ENST00000505625 WIZO95785 1651 aa6.34□□□□□ -1.39
MATR3-211ENST00000505625 CDK5RAP3Q96JB5 506 aa6.34□□□□□ -1.39
MATR3-211ENST00000505625 KIF16BQ96L93 1317 aa6.34□□□□□ -1.4
MATR3-211ENST00000505625 TRDNQ13061 729 aa6.34□□□□□ -1.4
MATR3-211ENST00000505625 ZNF354CQ86Y25 554 aa6.34□□□□□ -1.4
MATR3-211ENST00000505625 CCDC47Q96A33 483 aaKnown RBP6.34□□□□□ -1.4
MATR3-211ENST00000505625 CABP4P57796 275 aa6.33□□□□□ -1.4
MATR3-211ENST00000505625 POLD1P28340 1107 aa6.33□□□□□ -1.4
MATR3-211ENST00000505625 HOMER2Q9NSB8 354 aa6.33□□□□□ -1.4
MATR3-211ENST00000505625 TMOD2Q9NZR1 351 aa6.33□□□□□ -1.4
MATR3-211ENST00000505625 GJA3Q9Y6H8 435 aa6.33□□□□□ -1.4
MATR3-211ENST00000505625 MYL6BP14649 208 aa6.33□□□□□ -1.4
MATR3-211ENST00000505625 RTN4Q9NQC3 1192 aaKnown RBP6.33□□□□□ -1.4
MATR3-211ENST00000505625 PLS1Q14651 629 aa6.33□□□□□ -1.4
MATR3-211ENST00000505625 SYCP1Q15431 976 aa6.33□□□□□ -1.4
MATR3-211ENST00000505625 LRSAM1Q6UWE0 723 aa6.32□□□□□ -1.4
MATR3-211ENST00000505625 BIRC2Q13490 618 aa6.32□□□□□ -1.4
MATR3-211ENST00000505625 SPOUT1Q5T280 376 aaKnown RBP6.32□□□□□ -1.4
MATR3-211ENST00000505625 RPGRQ92834 1020 aaKnown RBP6.32□□□□□ -1.4
MATR3-211ENST00000505625 GZF1Q9H116 711 aaPredicted RBP6.32□□□□□ -1.4
MATR3-211ENST00000505625 PDCL3Q9H2J4 239 aa6.32□□□□□ -1.4
MATR3-211ENST00000505625 IPO8O15397 1037 aaKnown RBP6.32□□□□□ -1.4
MATR3-211ENST00000505625 CARMIL2Q6F5E8 1435 aa6.32□□□□□ -1.4
MATR3-211ENST00000505625 TRIM21P19474 475 aaKnown RBP6.31□□□□□ -1.4
MATR3-211ENST00000505625 TNNT3P45378 269 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms