RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 PRR20CP86479 221 aa10.13□□□□□ -0.79
SMN2-205ENST00000505346 PRR20DP86480 221 aa10.13□□□□□ -0.79
SMN2-205ENST00000505346 PRR20BP86481 221 aa10.13□□□□□ -0.79
SMN2-205ENST00000505346 PRR20AP86496 221 aa10.13□□□□□ -0.79
SMN2-205ENST00000505346 ANKLE1Q8NAG6 615 aa10.13□□□□□ -0.79
SMN2-205ENST00000505346 SPRYD3Q8NCJ5 442 aa10.13□□□□□ -0.79
SMN2-205ENST00000505346 EYA1Q99502 592 aa10.13□□□□□ -0.79
SMN2-205ENST00000505346 FAM187AA6NFU0 413 aa10.1□□□□□ -0.79
SMN2-205ENST00000505346 ZNF697Q5TEC3 545 aa10.1□□□□□ -0.79
SMN2-205ENST00000505346 EMID1Q96A84 441 aaPredicted RBP10.1□□□□□ -0.79
SMN2-205ENST00000505346 POTECB2RU33 542 aa10.09□□□□□ -0.79
SMN2-205ENST00000505346 PPEF1O14829 653 aaPredicted RBP10.08□□□□□ -0.8
SMN2-205ENST00000505346 KMT5BQ4FZB7 885 aa10.08□□□□□ -0.8
SMN2-205ENST00000505346 TLL1O43897 1013 aa10.07□□□□□ -0.8
SMN2-205ENST00000505346 AMER1Q5JTC6 1135 aaPredicted RBP10.07□□□□□ -0.8
SMN2-205ENST00000505346 LIAT1Q6ZQX7 453 aa10.07□□□□□ -0.8
SMN2-205ENST00000505346 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.07□□□□□ -0.8
SMN2-205ENST00000505346 S1PR4O95977 384 aa10.06□□□□□ -0.8
SMN2-205ENST00000505346 DNAJB2P25686 324 aa10.06□□□□□ -0.8
SMN2-205ENST00000505346 TNFRSF10AO00220 468 aa10.05□□□□□ -0.8
SMN2-205ENST00000505346 ACTN4O43707 911 aaKnown RBP10.04□□□□□ -0.8
SMN2-205ENST00000505346 GDF9O60383 454 aa10.04□□□□□ -0.8
SMN2-205ENST00000505346 TREML4Q6UXN2 200 aa10.04□□□□□ -0.8
SMN2-205ENST00000505346 RBM46Q8TBY0 533 aaKnown RBP10.04□□□□□ -0.8
SMN2-205ENST00000505346 NR1I2O75469 434 aa10.02□□□□□ -0.81
SMN2-205ENST00000505346 TMEM134Q9H6X4 195 aa10.02□□□□□ -0.81
SMN2-205ENST00000505346 ADH1BP00325 375 aa10.01□□□□□ -0.81
SMN2-205ENST00000505346 AAASQ9NRG9 546 aa10.01□□□□□ -0.81
SMN2-205ENST00000505346 ST8SIA5O15466 376 aa10□□□□□ -0.81
SMN2-205ENST00000505346 CFHP08603 1231 aa10□□□□□ -0.81
SMN2-205ENST00000505346 SLC6A16Q9GZN6 736 aa10□□□□□ -0.81
SMN2-205ENST00000505346 FOXC1Q12948 553 aa9.97□□□□□ -0.81
SMN2-205ENST00000505346 LMOD2Q6P5Q4 547 aa9.97□□□□□ -0.81
SMN2-205ENST00000505346 RCCD1A6NED2 376 aa9.96□□□□□ -0.82
SMN2-205ENST00000505346 CFAP44Q96MT7 982 aa9.96□□□□□ -0.82
SMN2-205ENST00000505346 ADGRG1Q9Y653 693 aa9.96□□□□□ -0.82
SMN2-205ENST00000505346 PTGDRQ13258 359 aa9.95□□□□□ -0.82
SMN2-205ENST00000505346 LCE2AQ5TA79 106 aaPredicted RBP9.94□□□□□ -0.82
SMN2-205ENST00000505346 RSPH4AQ5TD94 716 aa9.94□□□□□ -0.82
SMN2-205ENST00000505346 PAXIP1Q6ZW49 1069 aaPredicted RBP9.94□□□□□ -0.82
SMN2-205ENST00000505346 SCUBE3Q8IX30 993 aa9.94□□□□□ -0.82
SMN2-205ENST00000505346 PLA2G2CQ5R387 149 aa9.93□□□□□ -0.82
SMN2-205ENST00000505346 PKD2L1Q9P0L9 805 aa9.92□□□□□ -0.82
SMN2-205ENST00000505346 C11orf95C9JLR9 678 aaPredicted RBP9.91□□□□□ -0.82
SMN2-205ENST00000505346 WFS1O76024 890 aa9.91□□□□□ -0.82
SMN2-205ENST00000505346 CD2BP2O95400 341 aaKnown RBP9.91□□□□□ -0.82
SMN2-205ENST00000505346 SLC10A3P09131 477 aa9.91□□□□□ -0.82
SMN2-205ENST00000505346 MLLT3P42568 568 aaPredicted RBP9.91□□□□□ -0.82
SMN2-205ENST00000505346 CRIPAKQ8N1N5 446 aa9.91□□□□□ -0.82
SMN2-205ENST00000505346 SPSB2Q99619 263 aa9.91□□□□□ -0.82
SMN2-205ENST00000505346 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.9□□□□□ -0.82
SMN2-205ENST00000505346 NUTM2FA1L443 756 aa9.9□□□□□ -0.82
SMN2-205ENST00000505346 AXIN1O15169 862 aa9.9□□□□□ -0.82
SMN2-205ENST00000505346 FAM161AQ3B820 660 aa9.9□□□□□ -0.82
SMN2-205ENST00000505346 RTN4Q9NQC3 1192 aaKnown RBP9.9□□□□□ -0.82
SMN2-205ENST00000505346 RPIAP49247 311 aa9.89□□□□□ -0.83
SMN2-205ENST00000505346 CYP4X1Q8N118 509 aa9.89□□□□□ -0.83
SMN2-205ENST00000505346 ARHGEF1Q92888 912 aaKnown RBP9.88□□□□□ -0.83
SMN2-205ENST00000505346 DACH1Q9UI36 760 aa9.88□□□□□ -0.83
SMN2-205ENST00000505346 AVPP01185 164 aa9.87□□□□□ -0.83
SMN2-205ENST00000505346 CTC1Q2NKJ3 1217 aa9.87□□□□□ -0.83
SMN2-205ENST00000505346 PUS10Q3MIT2 529 aaKnown RBP9.87□□□□□ -0.83
SMN2-205ENST00000505346 OATP04181 439 aa9.86□□□□□ -0.83
SMN2-205ENST00000505346 TOR4AQ9NXH8 423 aa9.86□□□□□ -0.83
SMN2-205ENST00000505346 GMPR2Q9P2T1 348 aaKnown RBP9.86□□□□□ -0.83
SMN2-205ENST00000505346 STK17AQ9UEE5 414 aa9.86□□□□□ -0.83
SMN2-205ENST00000505346 INSM1Q01101 510 aaPredicted RBP9.84□□□□□ -0.83
SMN2-205ENST00000505346 FCHSD2O94868 740 aa9.83□□□□□ -0.84
SMN2-205ENST00000505346 FCF1Q9Y324 198 aaKnown RBP9.83□□□□□ -0.84
SMN2-205ENST00000505346 TTC24A2A3L6 582 aaPredicted RBP9.81□□□□□ -0.84
SMN2-205ENST00000505346 SMCPP49901 116 aaPredicted RBP9.81□□□□□ -0.84
SMN2-205ENST00000505346 PXYLP1Q8TE99 480 aa9.81□□□□□ -0.84
SMN2-205ENST00000505346 ZBTB24O43167 697 aaPredicted RBP9.8□□□□□ -0.84
SMN2-205ENST00000505346 WIPF1O43516 503 aa9.79□□□□□ -0.84
SMN2-205ENST00000505346 NFX1Q12986 1120 aaKnown RBP9.79□□□□□ -0.84
SMN2-205ENST00000505346 FMNL1O95466 1100 aaPredicted RBP9.78□□□□□ -0.84
SMN2-205ENST00000505346 RDH13Q8NBN7 331 aa9.77□□□□□ -0.85
SMN2-205ENST00000505346 ATP6V1AP38606 617 aa9.76□□□□□ -0.85
SMN2-205ENST00000505346 MORN1Q5T089 497 aa9.76□□□□□ -0.85
SMN2-205ENST00000505346 METTL3Q86U44 580 aaKnown RBP9.75□□□□□ -0.85
SMN2-205ENST00000505346 KCNV2Q8TDN2 545 aa9.75□□□□□ -0.85
SMN2-205ENST00000505346 THAP11Q96EK4 314 aa9.75□□□□□ -0.85
SMN2-205ENST00000505346 FUT2Q10981 343 aa9.74□□□□□ -0.85
SMN2-205ENST00000505346 FAM160A2Q8N612 972 aaPredicted RBP9.74□□□□□ -0.85
SMN2-205ENST00000505346 SNIP1Q8TAD8 396 aaKnown RBP9.73□□□□□ -0.85
SMN2-205ENST00000505346 SENP2Q9HC62 589 aa9.73□□□□□ -0.85
SMN2-205ENST00000505346 DAXXQ9UER7 740 aaPredicted RBP9.73□□□□□ -0.85
SMN2-205ENST00000505346 HIC1Q14526 733 aa9.72□□□□□ -0.85
SMN2-205ENST00000505346 ATP13A2Q9NQ11 1180 aa9.72□□□□□ -0.85
SMN2-205ENST00000505346 SLC27A5Q9Y2P5 690 aa9.72□□□□□ -0.85
SMN2-205ENST00000505346 SALL2Q9Y467 1007 aaPredicted RBP9.72□□□□□ -0.85
SMN2-205ENST00000505346 DDX11L8A8MPP1 907 aa9.71□□□□□ -0.86
SMN2-205ENST00000505346 TERTO14746 1132 aaKnown RBP9.71□□□□□ -0.86
SMN2-205ENST00000505346 WNT7AO00755 349 aa9.7□□□□□ -0.86
SMN2-205ENST00000505346 SNRPBP14678 240 aaKnown RBP9.69□□□□□ -0.86
SMN2-205ENST00000505346 SMPD1P17405 629 aa9.69□□□□□ -0.86
SMN2-205ENST00000505346 BRICD5Q6PL45 260 aa9.69□□□□□ -0.86
SMN2-205ENST00000505346 FECHP22830 423 aa9.68□□□□□ -0.86
SMN2-205ENST00000505346 SULF1Q8IWU6 871 aa9.68□□□□□ -0.86
SMN2-205ENST00000505346 TRIM47Q96LD4 638 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms