RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 KCNA6P17658 529 aa20.37■□□□□ 0.85
DDX41-204ENST00000504807 SLIT1O75093 1534 aa20.37■□□□□ 0.85
DDX41-204ENST00000504807 ANKRD50Q9ULJ7 1429 aa20.36■□□□□ 0.85
DDX41-204ENST00000504807 SPATA31A6Q5VVP1 1343 aa20.34■□□□□ 0.85
DDX41-204ENST00000504807 SLC26A8Q96RN1 970 aa20.34■□□□□ 0.85
DDX41-204ENST00000504807 MSH6P52701 1360 aa20.34■□□□□ 0.85
DDX41-204ENST00000504807 NOS1P29475 1434 aa20.33■□□□□ 0.84
DDX41-204ENST00000504807 KANK1Q14678 1352 aa20.33■□□□□ 0.84
DDX41-204ENST00000504807 UNC13BO14795 1591 aa20.31■□□□□ 0.84
DDX41-204ENST00000504807 IDI1Q13907 227 aa20.3■□□□□ 0.84
DDX41-204ENST00000504807 TMEM2Q9UHN6 1383 aa20.3■□□□□ 0.84
DDX41-204ENST00000504807 COL16A1Q07092 1604 aaPredicted RBP20.29■□□□□ 0.84
DDX41-204ENST00000504807 STAG3Q9UJ98 1225 aa20.29■□□□□ 0.84
DDX41-204ENST00000504807 CDK12Q9NYV4 1490 aaPredicted RBP20.27■□□□□ 0.84
DDX41-204ENST00000504807 ROCK1Q13464 1354 aa20.27■□□□□ 0.84
DDX41-204ENST00000504807 TET3O43151 1660 aa20.26■□□□□ 0.83
DDX41-204ENST00000504807 NUTM2BA6NNL0 878 aaPredicted RBP20.26■□□□□ 0.83
DDX41-204ENST00000504807 NUTM2EB1AL46 878 aaPredicted RBP20.26■□□□□ 0.83
DDX41-204ENST00000504807 NUTM2AQ8IVF1 878 aaPredicted RBP20.26■□□□□ 0.83
DDX41-204ENST00000504807 ITGAEP38570 1179 aa20.25■□□□□ 0.83
DDX41-204ENST00000504807 NKTRP30414 1462 aaKnown RBP20.24■□□□□ 0.83
DDX41-204ENST00000504807 ADGRB3O60242 1522 aa20.24■□□□□ 0.83
DDX41-204ENST00000504807 KDM5AP29375 1690 aaKnown RBP20.24■□□□□ 0.83
DDX41-204ENST00000504807 E9PCH4 1651 aa20.23■□□□□ 0.83
DDX41-204ENST00000504807 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
DDX41-204ENST00000504807 BCANQ96GW7 911 aa20.23■□□□□ 0.83
DDX41-204ENST00000504807 AFF2P51816 1311 aa20.23■□□□□ 0.83
DDX41-204ENST00000504807 GCC2Q8IWJ2 1684 aa20.22■□□□□ 0.83
DDX41-204ENST00000504807 RPRD2Q5VT52 1461 aaKnown RBP20.21■□□□□ 0.83
DDX41-204ENST00000504807 IQGAP3Q86VI3 1631 aa20.2■□□□□ 0.82
DDX41-204ENST00000504807 RGS12O14924 1447 aa20.2■□□□□ 0.82
DDX41-204ENST00000504807 MYO5BQ9ULV0 1848 aa20.19■□□□□ 0.82
DDX41-204ENST00000504807 ZRANB1Q9UGI0 708 aa20.19■□□□□ 0.82
DDX41-204ENST00000504807 RRBP1Q9P2E9 1410 aaKnown RBP20.19■□□□□ 0.82
DDX41-204ENST00000504807 NWD1Q149M9 1564 aa20.18■□□□□ 0.82
DDX41-204ENST00000504807 C14orf37Q86TY3 774 aa20.18■□□□□ 0.82
DDX41-204ENST00000504807 TMEM131LA2VDJ0 1609 aa20.17■□□□□ 0.82
DDX41-204ENST00000504807 ZFYVE9O95405 1425 aa20.17■□□□□ 0.82
DDX41-204ENST00000504807 QTRT2Q9H974 415 aaKnown RBP20.15■□□□□ 0.82
DDX41-204ENST00000504807 SHPRHQ149N8 1683 aa20.15■□□□□ 0.82
DDX41-204ENST00000504807 RBM6P78332 1123 aaKnown RBP20.14■□□□□ 0.81
DDX41-204ENST00000504807 SETBP1Q9Y6X0 1596 aa20.13■□□□□ 0.81
DDX41-204ENST00000504807 NUP155O75694 1391 aa20.13■□□□□ 0.81
DDX41-204ENST00000504807 SLC52A1Q9NWF4 448 aa20.13■□□□□ 0.81
DDX41-204ENST00000504807 AHDC1Q5TGY3 1603 aaPredicted RBP20.13■□□□□ 0.81
DDX41-204ENST00000504807 FOXD1Q16676 465 aa20.12■□□□□ 0.81
DDX41-204ENST00000504807 C8orf37Q96NL8 207 aa20.12■□□□□ 0.81
DDX41-204ENST00000504807 RIMS2Q9UQ26 1411 aa20.1■□□□□ 0.81
DDX41-204ENST00000504807 ATAD2Q6PL18 1390 aa20.09■□□□□ 0.81
DDX41-204ENST00000504807 ATF3P18847 181 aa20.09■□□□□ 0.81
DDX41-204ENST00000504807 CADPS2Q86UW7 1296 aa20.09■□□□□ 0.81
DDX41-204ENST00000504807 NAIPQ13075 1403 aa20.09■□□□□ 0.81
DDX41-204ENST00000504807 BRINP3Q76B58 766 aa20.07■□□□□ 0.8
DDX41-204ENST00000504807 DIP2AQ14689 1571 aa20.06■□□□□ 0.8
DDX41-204ENST00000504807 C19orf44Q9H6X5 657 aa20.05■□□□□ 0.8
DDX41-204ENST00000504807 PLEKHG1Q9ULL1 1385 aa20.05■□□□□ 0.8
DDX41-204ENST00000504807 ADAMTS13Q76LX8 1427 aa20.03■□□□□ 0.8
DDX41-204ENST00000504807 NCOA3Q9Y6Q9 1424 aa20.03■□□□□ 0.8
DDX41-204ENST00000504807 PPP1R15AO75807 674 aaPredicted RBP20.03■□□□□ 0.8
DDX41-204ENST00000504807 CHGAP10645 457 aaKnown RBP20.03■□□□□ 0.8
DDX41-204ENST00000504807 NGLY1Q96IV0 654 aa20.03■□□□□ 0.8
DDX41-204ENST00000504807 SPHKAPQ2M3C7 1700 aa20.02■□□□□ 0.8
DDX41-204ENST00000504807 CLTCL1P53675 1640 aa20■□□□□ 0.79
DDX41-204ENST00000504807 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.99■□□□□ 0.79
DDX41-204ENST00000504807 ADAMTS2O95450 1211 aa19.99■□□□□ 0.79
DDX41-204ENST00000504807 SETD5Q9C0A6 1442 aa19.99■□□□□ 0.79
DDX41-204ENST00000504807 CHD2O14647 1828 aaKnown RBP19.99■□□□□ 0.79
DDX41-204ENST00000504807 HFM1A2PYH4 1435 aa19.98■□□□□ 0.79
DDX41-204ENST00000504807 NRXN3Q9Y4C0 1643 aa19.98■□□□□ 0.79
DDX41-204ENST00000504807 LRRC59Q96AG4 307 aaKnown RBP19.97■□□□□ 0.79
DDX41-204ENST00000504807 TBX22Q9Y458 520 aa19.97■□□□□ 0.79
DDX41-204ENST00000504807 EP400Q96L91 3159 aa19.97■□□□□ 0.79
DDX41-204ENST00000504807 DDX17Q92841 729 aaKnown RBP19.96■□□□□ 0.79
DDX41-204ENST00000504807 ASXL1Q8IXJ9 1541 aa19.96■□□□□ 0.79
DDX41-204ENST00000504807 PTPRUQ92729 1446 aa19.95■□□□□ 0.78
DDX41-204ENST00000504807 TRPM2O94759 1503 aa19.95■□□□□ 0.78
DDX41-204ENST00000504807 PNPLA6Q8IY17 1366 aa19.94■□□□□ 0.78
DDX41-204ENST00000504807 USP21Q9UK80 565 aa19.93■□□□□ 0.78
DDX41-204ENST00000504807 NEXMIFQ5QGS0 1516 aa19.92■□□□□ 0.78
DDX41-204ENST00000504807 HDGFP51858 240 aaKnown RBP19.91■□□□□ 0.78
DDX41-204ENST00000504807 CCDC125Q86Z20 511 aa19.91■□□□□ 0.78
DDX41-204ENST00000504807 TRPC5Q9UL62 973 aaPredicted RBP19.91■□□□□ 0.78
DDX41-204ENST00000504807 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.9■□□□□ 0.78
DDX41-204ENST00000504807 AMOTL2Q9Y2J4 779 aa19.88■□□□□ 0.77
DDX41-204ENST00000504807 MST1RQ04912 1400 aa19.86■□□□□ 0.77
DDX41-204ENST00000504807 METP08581 1390 aa19.86■□□□□ 0.77
DDX41-204ENST00000504807 XRN1Q8IZH2 1706 aaKnown RBP19.86■□□□□ 0.77
DDX41-204ENST00000504807 NHSL1Q5SYE7 1610 aa19.85■□□□□ 0.77
DDX41-204ENST00000504807 DCCP43146 1447 aa19.85■□□□□ 0.77
DDX41-204ENST00000504807 PIK3R4Q99570 1358 aa19.84■□□□□ 0.77
DDX41-204ENST00000504807 ZNF326Q5BKZ1 582 aaKnown RBP19.83■□□□□ 0.77
DDX41-204ENST00000504807 ATRNO75882 1429 aa19.83■□□□□ 0.76
DDX41-204ENST00000504807 DEFB132Q7Z7B7 95 aa19.82■□□□□ 0.76
DDX41-204ENST00000504807 FNBP4Q8N3X1 1017 aaPredicted RBP19.81■□□□□ 0.76
DDX41-204ENST00000504807 SLC4A1APQ9BWU0 796 aaKnown RBP19.81■□□□□ 0.76
DDX41-204ENST00000504807 KIF1BO60333 1816 aa19.81■□□□□ 0.76
DDX41-204ENST00000504807 BLMP54132 1417 aaPredicted RBP19.77■□□□□ 0.76
DDX41-204ENST00000504807 LRP5O75197 1615 aa19.77■□□□□ 0.76
DDX41-204ENST00000504807 PPLO60437 1756 aa19.75■□□□□ 0.75
DDX41-204ENST00000504807 PSDA5PKW4 1024 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms