RNA–Protein interactions for RNA: ENST00000504230.2

LINC00958-201, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,558 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-201ENST00000504230 RIMS1Q86UR5 1692 aaKnown RBP15.98■□□□□ 0.15
LINC00958-201ENST00000504230 STAG3Q9UJ98 1225 aa15.98■□□□□ 0.15
LINC00958-201ENST00000504230 E9PCH4 1651 aa15.98■□□□□ 0.15
LINC00958-201ENST00000504230 CCER1Q8TC90 406 aaPredicted RBP15.97■□□□□ 0.15
LINC00958-201ENST00000504230 EVX2Q03828 476 aa15.96■□□□□ 0.14
LINC00958-201ENST00000504230 C3P01024 1663 aa15.94■□□□□ 0.14
LINC00958-201ENST00000504230 C19orf67A6NJJ6 358 aa15.93■□□□□ 0.14
LINC00958-201ENST00000504230 CEBPAP49715 358 aaPredicted RBP15.93■□□□□ 0.14
LINC00958-201ENST00000504230 CLSPNQ9HAW4 1339 aa15.93■□□□□ 0.14
LINC00958-201ENST00000504230 PTPRTO14522 1441 aa15.93■□□□□ 0.14
LINC00958-201ENST00000504230 PTPRMP28827 1452 aa15.93■□□□□ 0.14
LINC00958-201ENST00000504230 ERVK-7P63135 1459 aa15.93■□□□□ 0.14
LINC00958-201ENST00000504230 KDM4FA0A1W2PPD8 638 aa15.92■□□□□ 0.14
LINC00958-201ENST00000504230 FBXO31Q5XUX0 539 aaPredicted RBP15.92■□□□□ 0.14
LINC00958-201ENST00000504230 ANKRD30BQ9BXX2 1392 aa15.92■□□□□ 0.14
LINC00958-201ENST00000504230 NOS1P29475 1434 aa15.92■□□□□ 0.14
LINC00958-201ENST00000504230 PREX1Q8TCU6 1659 aa15.92■□□□□ 0.14
LINC00958-201ENST00000504230 SPHKAPQ2M3C7 1700 aa15.91■□□□□ 0.14
LINC00958-201ENST00000504230 TRPM2O94759 1503 aa15.91■□□□□ 0.14
LINC00958-201ENST00000504230 SPATA31D1Q6ZQQ2 1576 aa15.9■□□□□ 0.14
LINC00958-201ENST00000504230 CFAP65Q6ZU64 1925 aaKnown RBP15.9■□□□□ 0.14
LINC00958-201ENST00000504230 CCDC144AA2RUR9 1427 aa15.9■□□□□ 0.14
LINC00958-201ENST00000504230 PLA2R1Q13018 1463 aa15.89■□□□□ 0.13
LINC00958-201ENST00000504230 TNRQ92752 1358 aa15.89■□□□□ 0.13
LINC00958-201ENST00000504230 SLC52A1Q9NWF4 448 aa15.89■□□□□ 0.13
LINC00958-201ENST00000504230 SYNMO15061 1565 aa15.87■□□□□ 0.13
LINC00958-201ENST00000504230 FARP1Q9Y4F1 1045 aaPredicted RBP15.84■□□□□ 0.13
LINC00958-201ENST00000504230 NLRP1Q9C000 1473 aa15.84■□□□□ 0.13
LINC00958-201ENST00000504230 IDI1Q13907 227 aa15.83■□□□□ 0.13
LINC00958-201ENST00000504230 SIN3AQ96ST3 1273 aa15.83■□□□□ 0.13
LINC00958-201ENST00000504230 UGGT1Q9NYU2 1555 aa15.83■□□□□ 0.13
LINC00958-201ENST00000504230 CLTCL1P53675 1640 aa15.83■□□□□ 0.12
LINC00958-201ENST00000504230 NEUROD1Q13562 356 aa15.83■□□□□ 0.12
LINC00958-201ENST00000504230 PIK3C2BO00750 1634 aa15.82■□□□□ 0.12
LINC00958-201ENST00000504230 CHGAP10645 457 aaKnown RBP15.81■□□□□ 0.12
LINC00958-201ENST00000504230 SETD1BQ9UPS6 1966 aaKnown RBP15.81■□□□□ 0.12
LINC00958-201ENST00000504230 MYO3AQ8NEV4 1616 aa15.79■□□□□ 0.12
LINC00958-201ENST00000504230 PROM2Q8N271 834 aa15.79■□□□□ 0.12
LINC00958-201ENST00000504230 CREBZFQ9NS37 354 aa15.79■□□□□ 0.12
LINC00958-201ENST00000504230 KIF1BO60333 1816 aa15.78■□□□□ 0.12
LINC00958-201ENST00000504230 UHRF1BP1Q6BDS2 1440 aa15.78■□□□□ 0.12
LINC00958-201ENST00000504230 A2ML1A8K2U0 1454 aa15.77■□□□□ 0.12
LINC00958-201ENST00000504230 TONSLQ96HA7 1378 aa15.76■□□□□ 0.11
LINC00958-201ENST00000504230 ADGRB3O60242 1522 aa15.76■□□□□ 0.11
LINC00958-201ENST00000504230 ZNF326Q5BKZ1 582 aaKnown RBP15.76■□□□□ 0.11
LINC00958-201ENST00000504230 NEURL4Q96JN8 1562 aa15.76■□□□□ 0.11
LINC00958-201ENST00000504230 CEP170BQ9Y4F5 1589 aaPredicted RBP15.75■□□□□ 0.11
LINC00958-201ENST00000504230 SPATA31E1Q6ZUB1 1445 aa15.75■□□□□ 0.11
LINC00958-201ENST00000504230 RGL3Q3MIN7 710 aa15.75■□□□□ 0.11
LINC00958-201ENST00000504230 THEMISQ8N1K5 641 aaPredicted RBP15.75■□□□□ 0.11
LINC00958-201ENST00000504230 TIMELESSQ9UNS1 1208 aa15.75■□□□□ 0.11
LINC00958-201ENST00000504230 KDM5AP29375 1690 aaKnown RBP15.75■□□□□ 0.11
LINC00958-201ENST00000504230 TMEM131LA2VDJ0 1609 aa15.75■□□□□ 0.11
LINC00958-201ENST00000504230 ZNF142P52746 1687 aaPredicted RBP15.74■□□□□ 0.11
LINC00958-201ENST00000504230 RPGRIP1LQ68CZ1 1315 aa15.74■□□□□ 0.11
LINC00958-201ENST00000504230 UBR1Q8IWV7 1749 aa15.73■□□□□ 0.11
LINC00958-201ENST00000504230 HDGFP51858 240 aaKnown RBP15.71■□□□□ 0.11
LINC00958-201ENST00000504230 L3MBTL2Q969R5 705 aa15.7■□□□□ 0.1
LINC00958-201ENST00000504230 CD44P16070 742 aaKnown RBP15.7■□□□□ 0.1
LINC00958-201ENST00000504230 DCAF11Q8TEB1 546 aa15.7■□□□□ 0.1
LINC00958-201ENST00000504230 STAC3Q96MF2 364 aa15.7■□□□□ 0.1
LINC00958-201ENST00000504230 TMEM2Q9UHN6 1383 aa15.7■□□□□ 0.1
LINC00958-201ENST00000504230 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.69■□□□□ 0.1
LINC00958-201ENST00000504230 MYO5BQ9ULV0 1848 aa15.69■□□□□ 0.1
LINC00958-201ENST00000504230 ZEB1P37275 1124 aaPredicted RBP15.68■□□□□ 0.1
LINC00958-201ENST00000504230 RIMS2Q9UQ26 1411 aa15.67■□□□□ 0.1
LINC00958-201ENST00000504230 EID1Q9Y6B2 187 aa15.67■□□□□ 0.1
LINC00958-201ENST00000504230 VGFO15240 615 aaPredicted RBP15.66■□□□□ 0.1
LINC00958-201ENST00000504230 PPP1R15AO75807 674 aaPredicted RBP15.66■□□□□ 0.1
LINC00958-201ENST00000504230 KDM2AQ9Y2K7 1162 aa15.66■□□□□ 0.1
LINC00958-201ENST00000504230 SLIT1O75093 1534 aa15.66■□□□□ 0.1
LINC00958-201ENST00000504230 NEXMIFQ5QGS0 1516 aa15.66■□□□□ 0.1
LINC00958-201ENST00000504230 ARHGAP23Q9P227 1491 aa15.66■□□□□ 0.1
LINC00958-201ENST00000504230 LMTK3Q96Q04 1460 aa15.65■□□□□ 0.1
LINC00958-201ENST00000504230 ZFYVE9O95405 1425 aa15.65■□□□□ 0.1
LINC00958-201ENST00000504230 PPLO60437 1756 aa15.64■□□□□ 0.09
LINC00958-201ENST00000504230 GABBR2O75899 941 aa15.64■□□□□ 0.09
LINC00958-201ENST00000504230 TXNDC2Q86VQ3 553 aa15.64■□□□□ 0.09
LINC00958-201ENST00000504230 ANKLE2Q86XL3 938 aa15.64■□□□□ 0.09
LINC00958-201ENST00000504230 MYOM2P54296 1465 aa15.64■□□□□ 0.09
LINC00958-201ENST00000504230 IFT172Q9UG01 1749 aa15.63■□□□□ 0.09
LINC00958-201ENST00000504230 NUTM2DQ5VT03 806 aaPredicted RBP15.63■□□□□ 0.09
LINC00958-201ENST00000504230 LTKP29376 864 aa15.61■□□□□ 0.09
LINC00958-201ENST00000504230 HSPA2P54652 639 aa15.61■□□□□ 0.09
LINC00958-201ENST00000504230 SCAF11Q99590 1463 aaKnown RBP15.6■□□□□ 0.09
LINC00958-201ENST00000504230 ADGRF5Q8IZF2 1346 aa15.6■□□□□ 0.09
LINC00958-201ENST00000504230 BCANQ96GW7 911 aa15.59■□□□□ 0.09
LINC00958-201ENST00000504230 NRXN1Q9ULB1 1477 aa15.58■□□□□ 0.09
LINC00958-201ENST00000504230 PLEKHG1Q9ULL1 1385 aa15.58■□□□□ 0.09
LINC00958-201ENST00000504230 PRAG1Q86YV5 1406 aa15.58■□□□□ 0.08
LINC00958-201ENST00000504230 PIK3C2GO75747 1445 aa15.57■□□□□ 0.08
LINC00958-201ENST00000504230 NCKAP5LQ9HCH0 1330 aa15.56■□□□□ 0.08
LINC00958-201ENST00000504230 POLR1AO95602 1720 aaPredicted RBP15.56■□□□□ 0.08
LINC00958-201ENST00000504230 NBPF8Q3BBV2 869 aa15.55■□□□□ 0.08
LINC00958-201ENST00000504230 NPHP4O75161 1426 aaPredicted RBP15.54■□□□□ 0.08
LINC00958-201ENST00000504230 MNX1P50219 401 aaPredicted RBP15.54■□□□□ 0.08
LINC00958-201ENST00000504230 MED14O60244 1454 aa15.54■□□□□ 0.08
LINC00958-201ENST00000504230 SETBP1Q9Y6X0 1596 aa15.54■□□□□ 0.08
LINC00958-201ENST00000504230 C14orf93Q9H972 538 aaKnown RBP15.53■□□□□ 0.08
LINC00958-201ENST00000504230 CFAP70Q5T0N1 1121 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms