RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 THSD4Q6ZMP0 1018 aa7.15□□□□□ -1.26
ATXN3-208ENST00000504047 TMEM134Q9H6X4 195 aa7.15□□□□□ -1.26
ATXN3-208ENST00000504047 SLC24A3Q9HC58 644 aa7.15□□□□□ -1.26
ATXN3-208ENST00000504047 SWT1Q5T5J6 900 aaKnown RBP7.14□□□□□ -1.27
ATXN3-208ENST00000504047 RSPH4AQ5TD94 716 aa7.14□□□□□ -1.27
ATXN3-208ENST00000504047 BCAMP50895 628 aa7.13□□□□□ -1.27
ATXN3-208ENST00000504047 HCSTQ9UBK5 93 aa7.13□□□□□ -1.27
ATXN3-208ENST00000504047 DAXXQ9UER7 740 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-208ENST00000504047 TSR3Q9UJK0 312 aaKnown RBP7.13□□□□□ -1.27
ATXN3-208ENST00000504047 CLCN1P35523 988 aa7.12□□□□□ -1.27
ATXN3-208ENST00000504047 PTPN5P54829 565 aa7.12□□□□□ -1.27
ATXN3-208ENST00000504047 PPP4CP60510 307 aa7.12□□□□□ -1.27
ATXN3-208ENST00000504047 SULF1Q8IWU6 871 aa7.12□□□□□ -1.27
ATXN3-208ENST00000504047 PHOX2BQ99453 314 aa7.12□□□□□ -1.27
ATXN3-208ENST00000504047 NYAP1Q6ZVC0 841 aa7.11□□□□□ -1.27
ATXN3-208ENST00000504047 GPCPD1Q9NPB8 672 aa7.11□□□□□ -1.27
ATXN3-208ENST00000504047 HPS5Q9UPZ3 1129 aa7.11□□□□□ -1.27
ATXN3-208ENST00000504047 TRIM66O15016 1216 aa7.1□□□□□ -1.27
ATXN3-208ENST00000504047 MDM2Q00987 491 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-208ENST00000504047 TTLL12Q14166 644 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-208ENST00000504047 AMHR2Q16671 573 aa7.1□□□□□ -1.27
ATXN3-208ENST00000504047 NLRP7Q8WX94 980 aa7.09□□□□□ -1.27
ATXN3-208ENST00000504047 PRR14Q9BWN1 585 aa7.09□□□□□ -1.27
ATXN3-208ENST00000504047 DDX11L8A8MPP1 907 aa7.08□□□□□ -1.28
ATXN3-208ENST00000504047 RDH13Q8NBN7 331 aa7.08□□□□□ -1.28
ATXN3-208ENST00000504047 PDE4DQ08499 809 aa7.07□□□□□ -1.28
ATXN3-208ENST00000504047 WBP1LQ9NX94 342 aa7.07□□□□□ -1.28
ATXN3-208ENST00000504047 KMT5BQ4FZB7 885 aa7.06□□□□□ -1.28
ATXN3-208ENST00000504047 GIGYF2Q6Y7W6 1299 aaKnown RBP7.05□□□□□ -1.28
ATXN3-208ENST00000504047 CFHP08603 1231 aa7.04□□□□□ -1.28
ATXN3-208ENST00000504047 PRKCSHP14314 528 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-208ENST00000504047 SSTR3P32745 418 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-208ENST00000504047 TMUB1Q9BVT8 246 aa7.04□□□□□ -1.28
ATXN3-208ENST00000504047 FAM217BQ9NTX9 383 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-208ENST00000504047 SLC10A3P09131 477 aa7.03□□□□□ -1.28
ATXN3-208ENST00000504047 PARP9Q8IXQ6 854 aa7.03□□□□□ -1.28
ATXN3-208ENST00000504047 CD46P15529 392 aa7.02□□□□□ -1.29
ATXN3-208ENST00000504047 GCGRP47871 477 aa7.01□□□□□ -1.29
ATXN3-208ENST00000504047 APLP1P51693 650 aa7.01□□□□□ -1.29
ATXN3-208ENST00000504047 REPIN1Q9BWE0 567 aaKnown RBP7.01□□□□□ -1.29
ATXN3-208ENST00000504047 ACTN4O43707 911 aaKnown RBP7□□□□□ -1.29
ATXN3-208ENST00000504047 GRIPAP1Q4V328 841 aa7□□□□□ -1.29
ATXN3-208ENST00000504047 PCDHB3Q9Y5E6 796 aa7□□□□□ -1.29
ATXN3-208ENST00000504047 NEUROD2Q15784 382 aa6.99□□□□□ -1.29
ATXN3-208ENST00000504047 NUTM1Q86Y26 1132 aa6.99□□□□□ -1.29
ATXN3-208ENST00000504047 KDM4AO75164 1064 aa6.98□□□□□ -1.29
ATXN3-208ENST00000504047 USP46P62068 366 aa6.98□□□□□ -1.29
ATXN3-208ENST00000504047 DIXDC1Q155Q3 683 aa6.98□□□□□ -1.29
ATXN3-208ENST00000504047 BEGAINQ9BUH8 593 aa6.98□□□□□ -1.29
ATXN3-208ENST00000504047 ATP6V1AP38606 617 aa6.97□□□□□ -1.29
ATXN3-208ENST00000504047 KDM4CQ9H3R0 1056 aa6.97□□□□□ -1.29
ATXN3-208ENST00000504047 IL21Q9HBE4 155 aa6.97□□□□□ -1.29
ATXN3-208ENST00000504047 MS4A1P11836 297 aa6.96□□□□□ -1.3
ATXN3-208ENST00000504047 FUT2Q10981 343 aa6.96□□□□□ -1.3
ATXN3-208ENST00000504047 MTRQ99707 1265 aa6.96□□□□□ -1.3
ATXN3-208ENST00000504047 GPBP1L1Q9HC44 474 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-208ENST00000504047 NR1I2O75469 434 aa6.95□□□□□ -1.3
ATXN3-208ENST00000504047 ITGBL1O95965 494 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-208ENST00000504047 COPS2P61201 443 aa6.95□□□□□ -1.3
ATXN3-208ENST00000504047 KCNC4Q03721 635 aa6.95□□□□□ -1.3
ATXN3-208ENST00000504047 DDRGK1Q96HY6 314 aa6.95□□□□□ -1.3
ATXN3-208ENST00000504047 PLA2G2EQ9NZK7 142 aa6.95□□□□□ -1.3
ATXN3-208ENST00000504047 BRPF1P55201 1214 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-208ENST00000504047 BLOC1S3Q6QNY0 202 aa6.94□□□□□ -1.3
ATXN3-208ENST00000504047 PUS10Q3MIT2 529 aaKnown RBP6.93□□□□□ -1.3
ATXN3-208ENST00000504047 TJAP1Q5JTD0 557 aa6.93□□□□□ -1.3
ATXN3-208ENST00000504047 HOXA2O43364 376 aa6.92□□□□□ -1.3
ATXN3-208ENST00000504047 ZPR1O75312 459 aa6.92□□□□□ -1.3
ATXN3-208ENST00000504047 Q3C1V9 767 aa6.92□□□□□ -1.3
ATXN3-208ENST00000504047 MORN1Q5T089 497 aa6.92□□□□□ -1.3
ATXN3-208ENST00000504047 SPIRE2Q8WWL2 714 aa6.92□□□□□ -1.3
ATXN3-208ENST00000504047 TBC1D2Q9BYX2 928 aa6.92□□□□□ -1.3
ATXN3-208ENST00000504047 RSPH6AQ9H0K4 717 aa6.92□□□□□ -1.3
ATXN3-208ENST00000504047 IFFO2Q5TF58 517 aa6.91□□□□□ -1.3
ATXN3-208ENST00000504047 SCUBE3Q8IX30 993 aa6.9□□□□□ -1.3
ATXN3-208ENST00000504047 FAM117AQ9C073 453 aa6.9□□□□□ -1.3
ATXN3-208ENST00000504047 SLC27A5Q9Y2P5 690 aa6.9□□□□□ -1.3
ATXN3-208ENST00000504047 FMNL1O95466 1100 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-208ENST00000504047 GJA5P36382 358 aa6.89□□□□□ -1.31
ATXN3-208ENST00000504047 ZNF516Q92618 1163 aa6.89□□□□□ -1.31
ATXN3-208ENST00000504047 SALL2Q9Y467 1007 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-208ENST00000504047 FDX1P10109 184 aa6.88□□□□□ -1.31
ATXN3-208ENST00000504047 SPSB2Q99619 263 aa6.88□□□□□ -1.31
ATXN3-208ENST00000504047 ATP1B4Q9UN42 357 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-208ENST00000504047 MOXD2PA6NHM9 499 aa6.87□□□□□ -1.31
ATXN3-208ENST00000504047 ADH1BP00325 375 aa6.87□□□□□ -1.31
ATXN3-208ENST00000504047 GGCXP38435 758 aa6.87□□□□□ -1.31
ATXN3-208ENST00000504047 MYSM1Q5VVJ2 828 aa6.87□□□□□ -1.31
ATXN3-208ENST00000504047 RIC3Q7Z5B4 369 aa6.87□□□□□ -1.31
ATXN3-208ENST00000504047 IL27Q8NEV9 243 aa6.87□□□□□ -1.31
ATXN3-208ENST00000504047 NDUFV2P19404 249 aa6.86□□□□□ -1.31
ATXN3-208ENST00000504047 RSBN1LQ6PCB5 846 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-208ENST00000504047 C6orf229H3BNL8 230 aa6.85□□□□□ -1.31
ATXN3-208ENST00000504047 SPTLC1O15269 473 aa6.85□□□□□ -1.31
ATXN3-208ENST00000504047 TLL1O43897 1013 aa6.85□□□□□ -1.31
ATXN3-208ENST00000504047 CLK2P49760 499 aaKnown RBP6.85□□□□□ -1.31
ATXN3-208ENST00000504047 GUCA2AQ02747 115 aa6.85□□□□□ -1.31
ATXN3-208ENST00000504047 SKIV2LQ15477 1246 aaKnown RBP6.85□□□□□ -1.31
ATXN3-208ENST00000504047 SH3D19Q5HYK7 790 aa6.85□□□□□ -1.31
ATXN3-208ENST00000504047 BRICD5Q6PL45 260 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms