RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 OATP04181 439 aa10.71□□□□□ -0.69
SUB1-204ENST00000504016 PPP1R18Q6NYC8 613 aa10.71□□□□□ -0.69
SUB1-204ENST00000504016 PCDHB3Q9Y5E6 796 aa10.71□□□□□ -0.69
SUB1-204ENST00000504016 KDM2AQ9Y2K7 1162 aa10.7□□□□□ -0.7
SUB1-204ENST00000504016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.69□□□□□ -0.7
SUB1-204ENST00000504016 NKX2-3Q8TAU0 364 aa10.69□□□□□ -0.7
SUB1-204ENST00000504016 PXYLP1Q8TE99 480 aa10.68□□□□□ -0.7
SUB1-204ENST00000504016 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.68□□□□□ -0.7
SUB1-204ENST00000504016 ZPR1O75312 459 aa10.67□□□□□ -0.7
SUB1-204ENST00000504016 KMT5BQ4FZB7 885 aa10.67□□□□□ -0.7
SUB1-204ENST00000504016 GNPATO15228 680 aa10.66□□□□□ -0.7
SUB1-204ENST00000504016 PRKD2Q9BZL6 878 aa10.66□□□□□ -0.7
SUB1-204ENST00000504016 CFHP08603 1231 aa10.65□□□□□ -0.7
SUB1-204ENST00000504016 FECHP22830 423 aa10.65□□□□□ -0.7
SUB1-204ENST00000504016 GGCXP38435 758 aa10.65□□□□□ -0.7
SUB1-204ENST00000504016 BLOC1S3Q6QNY0 202 aa10.65□□□□□ -0.7
SUB1-204ENST00000504016 METTL3Q86U44 580 aaKnown RBP10.64□□□□□ -0.71
SUB1-204ENST00000504016 ACTN4O43707 911 aaKnown RBP10.62□□□□□ -0.71
SUB1-204ENST00000504016 SLC10A3P09131 477 aa10.62□□□□□ -0.71
SUB1-204ENST00000504016 RSPH4AQ5TD94 716 aa10.62□□□□□ -0.71
SUB1-204ENST00000504016 VSIG10Q8N0Z9 540 aa10.62□□□□□ -0.71
SUB1-204ENST00000504016 GPR37O15354 613 aa10.61□□□□□ -0.71
SUB1-204ENST00000504016 Q6ZNB5 142 aa10.6□□□□□ -0.71
SUB1-204ENST00000504016 GPIHBP1Q8IV16 184 aa10.6□□□□□ -0.71
SUB1-204ENST00000504016 V9GY48 417 aaPredicted RBP10.6□□□□□ -0.71
SUB1-204ENST00000504016 TMUB1Q9BVT8 246 aa10.59□□□□□ -0.71
SUB1-204ENST00000504016 LAPTM4AQ15012 233 aa10.58□□□□□ -0.72
SUB1-204ENST00000504016 TLL1O43897 1013 aa10.57□□□□□ -0.72
SUB1-204ENST00000504016 GFRA3O60609 400 aa10.57□□□□□ -0.72
SUB1-204ENST00000504016 DAXXQ9UER7 740 aaPredicted RBP10.57□□□□□ -0.72
SUB1-204ENST00000504016 TULP1O00294 542 aaPredicted RBP10.56□□□□□ -0.72
SUB1-204ENST00000504016 NR1I2O75469 434 aa10.56□□□□□ -0.72
SUB1-204ENST00000504016 RDH13Q8NBN7 331 aa10.55□□□□□ -0.72
SUB1-204ENST00000504016 NLRP7Q8WX94 980 aa10.55□□□□□ -0.72
SUB1-204ENST00000504016 DDX11L8A8MPP1 907 aa10.54□□□□□ -0.72
SUB1-204ENST00000504016 RNF223E7ERA6 249 aa10.53□□□□□ -0.72
SUB1-204ENST00000504016 PUS10Q3MIT2 529 aaKnown RBP10.52□□□□□ -0.73
SUB1-204ENST00000504016 S1PR4O95977 384 aa10.51□□□□□ -0.73
SUB1-204ENST00000504016 ADH1BP00325 375 aa10.51□□□□□ -0.73
SUB1-204ENST00000504016 SCUBE3Q8IX30 993 aa10.51□□□□□ -0.73
SUB1-204ENST00000504016 PHOX2BQ99453 314 aa10.5□□□□□ -0.73
SUB1-204ENST00000504016 NRG2O14511 850 aaPredicted RBP10.49□□□□□ -0.73
SUB1-204ENST00000504016 PPEF1O14829 653 aaPredicted RBP10.49□□□□□ -0.73
SUB1-204ENST00000504016 SULF1Q8IWU6 871 aa10.49□□□□□ -0.73
SUB1-204ENST00000504016 ANKLE1Q8NAG6 615 aa10.49□□□□□ -0.73
SUB1-204ENST00000504016 SLC19A1P41440 591 aa10.48□□□□□ -0.73
SUB1-204ENST00000504016 PDZRN3Q9UPQ7 1066 aa10.48□□□□□ -0.73
SUB1-204ENST00000504016 SLC6A16Q9GZN6 736 aa10.47□□□□□ -0.73
SUB1-204ENST00000504016 FUT2Q10981 343 aa10.46□□□□□ -0.73
SUB1-204ENST00000504016 SPSB2Q99619 263 aa10.46□□□□□ -0.73
SUB1-204ENST00000504016 ATP6V1AP38606 617 aa10.45□□□□□ -0.74
SUB1-204ENST00000504016 GCGRP47871 477 aa10.45□□□□□ -0.74
SUB1-204ENST00000504016 MAP2K5Q13163 448 aa10.45□□□□□ -0.74
SUB1-204ENST00000504016 TRAF7Q6Q0C0 670 aa10.45□□□□□ -0.74
SUB1-204ENST00000504016 MORN1Q5T089 497 aa10.44□□□□□ -0.74
SUB1-204ENST00000504016 EMID1Q96A84 441 aaPredicted RBP10.43□□□□□ -0.74
SUB1-204ENST00000504016 IRF6O14896 467 aa10.42□□□□□ -0.74
SUB1-204ENST00000504016 SPRYD7Q5W111 196 aa10.42□□□□□ -0.74
SUB1-204ENST00000504016 LIAT1Q6ZQX7 453 aa10.41□□□□□ -0.74
SUB1-204ENST00000504016 MINK1Q8N4C8 1332 aaPredicted RBP10.4□□□□□ -0.74
SUB1-204ENST00000504016 ZNF598Q86UK7 904 aaKnown RBP10.4□□□□□ -0.74
SUB1-204ENST00000504016 SLC27A5Q9Y2P5 690 aa10.4□□□□□ -0.74
SUB1-204ENST00000504016 FMNL1O95466 1100 aaPredicted RBP10.39□□□□□ -0.75
SUB1-204ENST00000504016 GRIPAP1Q4V328 841 aa10.39□□□□□ -0.75
SUB1-204ENST00000504016 LCE2BO14633 110 aa10.38□□□□□ -0.75
SUB1-204ENST00000504016 MDM2Q00987 491 aaPredicted RBP10.37□□□□□ -0.75
SUB1-204ENST00000504016 PLA2G2CQ5R387 149 aa10.37□□□□□ -0.75
SUB1-204ENST00000504016 ZNF697Q5TEC3 545 aa10.37□□□□□ -0.75
SUB1-204ENST00000504016 THAP11Q96EK4 314 aa10.37□□□□□ -0.75
SUB1-204ENST00000504016 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
SUB1-204ENST00000504016 TRIM67Q6ZTA4 783 aa10.36□□□□□ -0.75
SUB1-204ENST00000504016 CD46P15529 392 aa10.35□□□□□ -0.75
SUB1-204ENST00000504016 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.35□□□□□ -0.75
SUB1-204ENST00000504016 CCDC102AQ96A19 550 aa10.35□□□□□ -0.75
SUB1-204ENST00000504016 SALL2Q9Y467 1007 aaPredicted RBP10.35□□□□□ -0.75
SUB1-204ENST00000504016 BRICD5Q6PL45 260 aa10.34□□□□□ -0.75
SUB1-204ENST00000504016 FAM160A2Q8N612 972 aaPredicted RBP10.34□□□□□ -0.75
SUB1-204ENST00000504016 FCF1Q9Y324 198 aaKnown RBP10.33□□□□□ -0.76
SUB1-204ENST00000504016 KDM4AO75164 1064 aa10.32□□□□□ -0.76
SUB1-204ENST00000504016 PRR20EP86478 221 aa10.32□□□□□ -0.76
SUB1-204ENST00000504016 PRR20CP86479 221 aa10.32□□□□□ -0.76
SUB1-204ENST00000504016 PRR20DP86480 221 aa10.32□□□□□ -0.76
SUB1-204ENST00000504016 PRR20BP86481 221 aa10.32□□□□□ -0.76
SUB1-204ENST00000504016 PRR20AP86496 221 aa10.32□□□□□ -0.76
SUB1-204ENST00000504016 KRI1Q8N9T8 703 aaKnown RBP10.32□□□□□ -0.76
SUB1-204ENST00000504016 TNFRSF10AO00220 468 aa10.31□□□□□ -0.76
SUB1-204ENST00000504016 Q3C1V9 767 aa10.31□□□□□ -0.76
SUB1-204ENST00000504016 PKDCCQ504Y2 493 aa10.31□□□□□ -0.76
SUB1-204ENST00000504016 RNF19BQ6ZMZ0 732 aa10.31□□□□□ -0.76
SUB1-204ENST00000504016 LMOD2Q6P5Q4 547 aa10.3□□□□□ -0.76
SUB1-204ENST00000504016 PRDM9Q9NQV7 894 aa10.3□□□□□ -0.76
SUB1-204ENST00000504016 GDF9O60383 454 aa10.29□□□□□ -0.76
SUB1-204ENST00000504016 CLCN1P35523 988 aa10.29□□□□□ -0.76
SUB1-204ENST00000504016 RPIAP49247 311 aa10.29□□□□□ -0.76
SUB1-204ENST00000504016 GPCPD1Q9NPB8 672 aa10.29□□□□□ -0.76
SUB1-204ENST00000504016 CD2BP2O95400 341 aaKnown RBP10.28□□□□□ -0.76
SUB1-204ENST00000504016 USP46P62068 366 aa10.28□□□□□ -0.76
SUB1-204ENST00000504016 FOXC1Q12948 553 aa10.28□□□□□ -0.76
SUB1-204ENST00000504016 MSS51Q4VC12 460 aa10.28□□□□□ -0.76
SUB1-204ENST00000504016 DGAT1O75907 488 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms