RNA–Protein interactions for RNA: ENST00000503498.1

EFCAB12-202, Transcript of EF-hand calcium binding domain 12, humanhuman

TSL 2

Gene EFCAB12, Length 5,607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB12-202ENST00000503498 NUCB2P80303 420 aa13.27□□□□□ -0.28
EFCAB12-202ENST00000503498 PDCL3Q9H2J4 239 aa13.27□□□□□ -0.28
EFCAB12-202ENST00000503498 LRRCC1Q9C099 1032 aa13.27□□□□□ -0.28
EFCAB12-202ENST00000503498 TTLL5Q6EMB2 1281 aa13.27□□□□□ -0.29
EFCAB12-202ENST00000503498 PDILTQ8N807 584 aa13.27□□□□□ -0.29
EFCAB12-202ENST00000503498 VPS53Q5VIR6 699 aa13.26□□□□□ -0.29
EFCAB12-202ENST00000503498 MICALCLQ6ZW33 695 aa13.26□□□□□ -0.29
EFCAB12-202ENST00000503498 STK31Q9BXU1 1019 aa13.26□□□□□ -0.29
EFCAB12-202ENST00000503498 CCDC180Q9P1Z9 1646 aa13.26□□□□□ -0.29
EFCAB12-202ENST00000503498 CENPQQ7L2Z9 268 aaPredicted RBP13.26□□□□□ -0.29
EFCAB12-202ENST00000503498 MCTP1Q6DN14 999 aa13.26□□□□□ -0.29
EFCAB12-202ENST00000503498 KIAA1328Q86T90 577 aa13.25□□□□□ -0.29
EFCAB12-202ENST00000503498 SUDS3Q9H7L9 328 aaPredicted RBP13.25□□□□□ -0.29
EFCAB12-202ENST00000503498 SMARCE1Q969G3 411 aa13.24□□□□□ -0.29
EFCAB12-202ENST00000503498 ZHX1Q9UKY1 873 aaPredicted RBP13.24□□□□□ -0.29
EFCAB12-202ENST00000503498 CCDC102AQ96A19 550 aa13.24□□□□□ -0.29
EFCAB12-202ENST00000503498 TIGD1Q96MW7 591 aa13.24□□□□□ -0.29
EFCAB12-202ENST00000503498 PLEKHG5O94827 1062 aa13.24□□□□□ -0.29
EFCAB12-202ENST00000503498 CCDC175P0C221 793 aa13.24□□□□□ -0.29
EFCAB12-202ENST00000503498 CBX1P83916 185 aa13.24□□□□□ -0.29
EFCAB12-202ENST00000503498 OLFM4Q6UX06 510 aa13.24□□□□□ -0.29
EFCAB12-202ENST00000503498 PAXIP1Q6ZW49 1069 aaPredicted RBP13.24□□□□□ -0.29
EFCAB12-202ENST00000503498 CHMP3Q9Y3E7 222 aa13.24□□□□□ -0.29
EFCAB12-202ENST00000503498 TAX1BP1Q86VP1 789 aa13.24□□□□□ -0.29
EFCAB12-202ENST00000503498 CPSF2Q9P2I0 782 aaKnown RBP13.24□□□□□ -0.29
EFCAB12-202ENST00000503498 AKAP17AQ02040 695 aaKnown RBP13.23□□□□□ -0.29
EFCAB12-202ENST00000503498 CCDC73Q6ZRK6 1079 aa13.23□□□□□ -0.29
EFCAB12-202ENST00000503498 PPM1EQ8WY54 764 aa13.23□□□□□ -0.29
EFCAB12-202ENST00000503498 FAM114A1Q8IWE2 563 aa13.23□□□□□ -0.29
EFCAB12-202ENST00000503498 KRI1Q8N9T8 703 aaKnown RBP13.23□□□□□ -0.29
EFCAB12-202ENST00000503498 RBM28Q9NW13 759 aaKnown RBP13.23□□□□□ -0.29
EFCAB12-202ENST00000503498 EEA1Q15075 1411 aa13.23□□□□□ -0.29
EFCAB12-202ENST00000503498 TSPY4P0CV99 314 aa13.22□□□□□ -0.29
EFCAB12-202ENST00000503498 TSPY10P0CW01 314 aa13.22□□□□□ -0.29
EFCAB12-202ENST00000503498 TRIM5Q9C035 493 aa13.22□□□□□ -0.29
EFCAB12-202ENST00000503498 TSPY26PQ9H489 355 aa13.22□□□□□ -0.29
EFCAB12-202ENST00000503498 DAAM2Q86T65 1068 aa13.22□□□□□ -0.29
EFCAB12-202ENST00000503498 TRIM29Q14134 588 aa13.22□□□□□ -0.29
EFCAB12-202ENST00000503498 DNAAF4Q8WXU2 420 aa13.22□□□□□ -0.29
EFCAB12-202ENST00000503498 FBLN2P98095 1184 aa13.22□□□□□ -0.29
EFCAB12-202ENST00000503498 HDAC5Q9UQL6 1122 aa13.22□□□□□ -0.29
EFCAB12-202ENST00000503498 GBP2P32456 591 aaPredicted RBP13.21□□□□□ -0.29
EFCAB12-202ENST00000503498 MNAT1P51948 309 aa13.21□□□□□ -0.29
EFCAB12-202ENST00000503498 SARNPP82979 210 aaKnown RBP13.21□□□□□ -0.29
EFCAB12-202ENST00000503498 TMX4Q9H1E5 349 aaPredicted RBP13.21□□□□□ -0.29
EFCAB12-202ENST00000503498 IQCEQ6IPM2 695 aa13.21□□□□□ -0.29
EFCAB12-202ENST00000503498 OFD1O75665 1012 aa13.21□□□□□ -0.29
EFCAB12-202ENST00000503498 LMOD3Q0VAK6 560 aa13.21□□□□□ -0.29
EFCAB12-202ENST00000503498 CFAP45Q9UL16 551 aa13.21□□□□□ -0.3
EFCAB12-202ENST00000503498 FAM193AP78312 1265 aa13.21□□□□□ -0.3
EFCAB12-202ENST00000503498 MAP2K1Q02750 393 aaPredicted RBP13.21□□□□□ -0.3
EFCAB12-202ENST00000503498 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.3
EFCAB12-202ENST00000503498 TMCO3Q6UWJ1 677 aa13.2□□□□□ -0.3
EFCAB12-202ENST00000503498 FBXW7Q969H0 707 aa13.19□□□□□ -0.3
EFCAB12-202ENST00000503498 SWAP70Q9UH65 585 aa13.19□□□□□ -0.3
EFCAB12-202ENST00000503498 CGNL1Q0VF96 1302 aa13.19□□□□□ -0.3
EFCAB12-202ENST00000503498 GBP3Q9H0R5 595 aa13.19□□□□□ -0.3
EFCAB12-202ENST00000503498 TRAK2O60296 914 aa13.19□□□□□ -0.3
EFCAB12-202ENST00000503498 CCDC91Q7Z6B0 441 aa13.19□□□□□ -0.3
EFCAB12-202ENST00000503498 TOMM22Q9NS69 142 aa13.19□□□□□ -0.3
EFCAB12-202ENST00000503498 FYB1O15117 783 aa13.19□□□□□ -0.3
EFCAB12-202ENST00000503498 ZFYVE27Q5T4F4 411 aa13.19□□□□□ -0.3
EFCAB12-202ENST00000503498 CPLX2Q6PUV4 134 aaKnown RBP13.19□□□□□ -0.3
EFCAB12-202ENST00000503498 PPP1R15AO75807 674 aaPredicted RBP13.18□□□□□ -0.3
EFCAB12-202ENST00000503498 CCDC181Q5TID7 509 aa13.18□□□□□ -0.3
EFCAB12-202ENST00000503498 RNF214Q8ND24 703 aa13.18□□□□□ -0.3
EFCAB12-202ENST00000503498 RTF1Q92541 710 aaKnown RBP13.18□□□□□ -0.3
EFCAB12-202ENST00000503498 POLR3GO15318 223 aaPredicted RBP13.17□□□□□ -0.3
EFCAB12-202ENST00000503498 SMC2O95347 1197 aa13.17□□□□□ -0.3
EFCAB12-202ENST00000503498 STAMBPO95630 424 aa13.17□□□□□ -0.3
EFCAB12-202ENST00000503498 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
EFCAB12-202ENST00000503498 SYNE3Q6ZMZ3 975 aa13.17□□□□□ -0.3
EFCAB12-202ENST00000503498 MBD3O95983 291 aa13.17□□□□□ -0.3
EFCAB12-202ENST00000503498 RNF187Q5TA31 235 aaPredicted RBP13.17□□□□□ -0.3
EFCAB12-202ENST00000503498 EPS15P42566 896 aa13.16□□□□□ -0.3
EFCAB12-202ENST00000503498 KTN1Q86UP2 1357 aaKnown RBP13.16□□□□□ -0.3
EFCAB12-202ENST00000503498 CTR9Q6PD62 1173 aa13.16□□□□□ -0.3
EFCAB12-202ENST00000503498 TXLNBQ8N3L3 684 aa13.16□□□□□ -0.3
EFCAB12-202ENST00000503498 LUZP1Q86V48 1076 aa13.16□□□□□ -0.3
EFCAB12-202ENST00000503498 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.15□□□□□ -0.3
EFCAB12-202ENST00000503498 ESPNB1AK53 854 aa13.15□□□□□ -0.3
EFCAB12-202ENST00000503498 REC8O95072 547 aa13.15□□□□□ -0.3
EFCAB12-202ENST00000503498 FILIP1LQ4L180 1135 aa13.15□□□□□ -0.3
EFCAB12-202ENST00000503498 GTF2F1P35269 517 aaKnown RBP eCLIP13.15□□□□□ -0.3
EFCAB12-202ENST00000503498 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
EFCAB12-202ENST00000503498 PAF1Q8N7H5 531 aa13.15□□□□□ -0.3
EFCAB12-202ENST00000503498 SMC4Q9NTJ3 1288 aa13.15□□□□□ -0.3
EFCAB12-202ENST00000503498 PDE3BQ13370 1112 aa13.14□□□□□ -0.31
EFCAB12-202ENST00000503498 TMF1P82094 1093 aa13.14□□□□□ -0.31
EFCAB12-202ENST00000503498 CRACR2AQ9BSW2 395 aa13.14□□□□□ -0.31
EFCAB12-202ENST00000503498 DZIP1Q86YF9 867 aaKnown RBP13.14□□□□□ -0.31
EFCAB12-202ENST00000503498 SMC3Q9UQE7 1217 aa13.14□□□□□ -0.31
EFCAB12-202ENST00000503498 NOL10Q9BSC4 688 aaKnown RBP13.13□□□□□ -0.31
EFCAB12-202ENST00000503498 UBXN4Q92575 508 aa13.13□□□□□ -0.31
EFCAB12-202ENST00000503498 VPS37CA5D8V6 355 aaPredicted RBP13.12□□□□□ -0.31
EFCAB12-202ENST00000503498 PLEKHD1A6NEE1 506 aa13.12□□□□□ -0.31
EFCAB12-202ENST00000503498 RGL3Q3MIN7 710 aa13.12□□□□□ -0.31
EFCAB12-202ENST00000503498 KIF3CO14782 793 aa13.12□□□□□ -0.31
EFCAB12-202ENST00000503498 CENPJQ9HC77 1338 aaPredicted RBP13.12□□□□□ -0.31
EFCAB12-202ENST00000503498 TXLNAP40222 546 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms