RNA–Protein interactions for RNA: ENST00000503114.1

TRIM41-203, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 1,904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-203ENST00000503114 LMTK2Q8IWU2 1503 aa25.51■■□□□ 1.67
TRIM41-203ENST00000503114 ABCA6Q8N139 1617 aa25.51■■□□□ 1.67
TRIM41-203ENST00000503114 PPRC1Q5VV67 1664 aaKnown RBP25.5■■□□□ 1.67
TRIM41-203ENST00000503114 KIF3BO15066 747 aa25.5■■□□□ 1.67
TRIM41-203ENST00000503114 MSH5O43196 834 aa25.49■■□□□ 1.67
TRIM41-203ENST00000503114 KDM5AP29375 1690 aaKnown RBP25.49■■□□□ 1.67
TRIM41-203ENST00000503114 EIF3AQ14152 1382 aaKnown RBP25.48■■□□□ 1.67
TRIM41-203ENST00000503114 MROH2AA6NES4 1674 aa25.48■■□□□ 1.67
TRIM41-203ENST00000503114 CDCA8Q53HL2 280 aa25.48■■□□□ 1.67
TRIM41-203ENST00000503114 RRP1P56182 461 aaKnown RBP25.47■■□□□ 1.67
TRIM41-203ENST00000503114 ZNF518AQ6AHZ1 1483 aa25.47■■□□□ 1.67
TRIM41-203ENST00000503114 CFAP74Q9C0B2 1584 aa25.47■■□□□ 1.67
TRIM41-203ENST00000503114 UGGT1Q9NYU2 1555 aa25.47■■□□□ 1.67
TRIM41-203ENST00000503114 CCDC136Q96JN2 1154 aa25.47■■□□□ 1.67
TRIM41-203ENST00000503114 ASXL1Q8IXJ9 1541 aa25.45■■□□□ 1.66
TRIM41-203ENST00000503114 RCAN3Q9UKA8 241 aa25.44■■□□□ 1.66
TRIM41-203ENST00000503114 NRXN1Q9ULB1 1477 aa25.43■■□□□ 1.66
TRIM41-203ENST00000503114 MYO3AQ8NEV4 1616 aa25.43■■□□□ 1.66
TRIM41-203ENST00000503114 AMER1Q5JTC6 1135 aaPredicted RBP25.42■■□□□ 1.66
TRIM41-203ENST00000503114 NPC1L1Q9UHC9 1359 aa25.42■■□□□ 1.66
TRIM41-203ENST00000503114 KNSTRNQ9Y448 316 aa25.41■■□□□ 1.66
TRIM41-203ENST00000503114 ADGRB3O60242 1522 aa25.4■■□□□ 1.66
TRIM41-203ENST00000503114 NPM1P06748 294 aaKnown RBP eCLIP25.39■■□□□ 1.65
TRIM41-203ENST00000503114 MYT1LQ9UL68 1186 aa25.39■■□□□ 1.65
TRIM41-203ENST00000503114 PIK3C2GO75747 1445 aa25.38■■□□□ 1.65
TRIM41-203ENST00000503114 SALL2Q9Y467 1007 aaPredicted RBP25.38■■□□□ 1.65
TRIM41-203ENST00000503114 PPP2R1AP30153 589 aa25.37■■□□□ 1.65
TRIM41-203ENST00000503114 FRMPD1Q5SYB0 1578 aa25.37■■□□□ 1.65
TRIM41-203ENST00000503114 POGZQ7Z3K3 1410 aa25.36■■□□□ 1.65
TRIM41-203ENST00000503114 ERVK-7P63135 1459 aa25.36■■□□□ 1.65
TRIM41-203ENST00000503114 SETBP1Q9Y6X0 1596 aa25.36■■□□□ 1.65
TRIM41-203ENST00000503114 SLC24A1O60721 1099 aa25.35■■□□□ 1.65
TRIM41-203ENST00000503114 CDCA7LQ96GN5 454 aa25.35■■□□□ 1.65
TRIM41-203ENST00000503114 MLH3Q9UHC1 1453 aa25.35■■□□□ 1.65
TRIM41-203ENST00000503114 HECW2Q9P2P5 1572 aa25.35■■□□□ 1.65
TRIM41-203ENST00000503114 PPLO60437 1756 aa25.34■■□□□ 1.65
TRIM41-203ENST00000503114 ADGRF5Q8IZF2 1346 aa25.34■■□□□ 1.65
TRIM41-203ENST00000503114 CFAP70Q5T0N1 1121 aa25.32■■□□□ 1.64
TRIM41-203ENST00000503114 ADAMTS8Q9UP79 889 aa25.31■■□□□ 1.64
TRIM41-203ENST00000503114 SBNO2Q9Y2G9 1366 aa25.31■■□□□ 1.64
TRIM41-203ENST00000503114 EXOC6Q8TAG9 804 aa25.31■■□□□ 1.64
TRIM41-203ENST00000503114 ZC3H13Q5T200 1668 aaKnown RBP25.3■■□□□ 1.64
TRIM41-203ENST00000503114 CD109Q6YHK3 1445 aa25.3■■□□□ 1.64
TRIM41-203ENST00000503114 NPATQ14207 1427 aa25.28■■□□□ 1.64
TRIM41-203ENST00000503114 NOS1P29475 1434 aa25.26■■□□□ 1.63
TRIM41-203ENST00000503114 WDR43Q15061 677 aaKnown RBP eCLIP25.25■■□□□ 1.63
TRIM41-203ENST00000503114 CFAP65Q6ZU64 1925 aaKnown RBP25.25■■□□□ 1.63
TRIM41-203ENST00000503114 PLEKHH1Q9ULM0 1364 aa25.24■■□□□ 1.63
TRIM41-203ENST00000503114 ABCC3O15438 1527 aa25.24■■□□□ 1.63
TRIM41-203ENST00000503114 ZNF521Q96K83 1311 aa25.24■■□□□ 1.63
TRIM41-203ENST00000503114 CAMSAP1Q5T5Y3 1602 aa25.23■■□□□ 1.63
TRIM41-203ENST00000503114 QRICH2Q9H0J4 1663 aa25.22■■□□□ 1.63
TRIM41-203ENST00000503114 ADGRB1O14514 1584 aa25.21■■□□□ 1.63
TRIM41-203ENST00000503114 NEO1Q92859 1461 aa25.2■■□□□ 1.62
TRIM41-203ENST00000503114 PIK3C2BO00750 1634 aa25.19■■□□□ 1.62
TRIM41-203ENST00000503114 SIGLEC1Q9BZZ2 1709 aa25.19■■□□□ 1.62
TRIM41-203ENST00000503114 ERICH6Q7L0X2 663 aa25.18■■□□□ 1.62
TRIM41-203ENST00000503114 DUSP27Q5VZP5 1158 aa25.16■■□□□ 1.62
TRIM41-203ENST00000503114 CARD14Q9BXL6 1004 aa25.16■■□□□ 1.62
TRIM41-203ENST00000503114 CENPJQ9HC77 1338 aaPredicted RBP25.16■■□□□ 1.62
TRIM41-203ENST00000503114 RPGRIP1LQ68CZ1 1315 aa25.15■■□□□ 1.62
TRIM41-203ENST00000503114 C14orf93Q9H972 538 aaKnown RBP25.15■■□□□ 1.62
TRIM41-203ENST00000503114 DIP2CQ9Y2E4 1556 aa25.15■■□□□ 1.62
TRIM41-203ENST00000503114 USP32Q8NFA0 1604 aa25.14■■□□□ 1.61
TRIM41-203ENST00000503114 PLIN1O60240 522 aa25.14■■□□□ 1.61
TRIM41-203ENST00000503114 TCERG1O14776 1098 aaKnown RBP25.13■■□□□ 1.61
TRIM41-203ENST00000503114 GOLGA2Q08379 1002 aa25.12■■□□□ 1.61
TRIM41-203ENST00000503114 RICTORQ6R327 1708 aa25.12■■□□□ 1.61
TRIM41-203ENST00000503114 GGT6Q6P531 493 aa25.11■■□□□ 1.61
TRIM41-203ENST00000503114 CRBNQ96SW2 442 aa25.11■■□□□ 1.61
TRIM41-203ENST00000503114 GLI2P10070 1586 aa25.1■■□□□ 1.61
TRIM41-203ENST00000503114 ARHGEF28Q8N1W1 1705 aaKnown RBP25.09■■□□□ 1.61
TRIM41-203ENST00000503114 NEXMIFQ5QGS0 1516 aa25.09■■□□□ 1.61
TRIM41-203ENST00000503114 CHGAP10645 457 aaKnown RBP25.09■■□□□ 1.61
TRIM41-203ENST00000503114 TRMT2AQ8IZ69 625 aaKnown RBP25.09■■□□□ 1.61
TRIM41-203ENST00000503114 SLFN5Q08AF3 891 aa25.08■■□□□ 1.61
TRIM41-203ENST00000503114 SHPRHQ149N8 1683 aa25.08■■□□□ 1.61
TRIM41-203ENST00000503114 POLR3AO14802 1390 aaPredicted RBP25.08■■□□□ 1.6
TRIM41-203ENST00000503114 ARHGAP31Q2M1Z3 1444 aa25.07■■□□□ 1.6
TRIM41-203ENST00000503114 MS4A1P11836 297 aa25.06■■□□□ 1.6
TRIM41-203ENST00000503114 NOP58Q9Y2X3 529 aaKnown RBP25.06■■□□□ 1.6
TRIM41-203ENST00000503114 ANP32AP39687 249 aaKnown RBP25.05■■□□□ 1.6
TRIM41-203ENST00000503114 NGEFQ8N5V2 710 aa25.05■■□□□ 1.6
TRIM41-203ENST00000503114 NSD3Q9BZ95 1437 aa25.04■■□□□ 1.6
TRIM41-203ENST00000503114 TRAK1Q9UPV9 953 aa25.04■■□□□ 1.6
TRIM41-203ENST00000503114 C20orf194Q5TEA3 1177 aa25.03■■□□□ 1.6
TRIM41-203ENST00000503114 CCDC146Q8IYE0 955 aa25.03■■□□□ 1.6
TRIM41-203ENST00000503114 NKTRP30414 1462 aaKnown RBP25.02■■□□□ 1.6
TRIM41-203ENST00000503114 IPO9Q96P70 1041 aaKnown RBP25.02■■□□□ 1.6
TRIM41-203ENST00000503114 APAF1O14727 1248 aa25.01■■□□□ 1.59
TRIM41-203ENST00000503114 RAPGEF3O95398 923 aa25■■□□□ 1.59
TRIM41-203ENST00000503114 PUS7Q96PZ0 661 aaKnown RBP25■■□□□ 1.59
TRIM41-203ENST00000503114 TULP4Q9NRJ4 1543 aa24.99■■□□□ 1.59
TRIM41-203ENST00000503114 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.98■■□□□ 1.59
TRIM41-203ENST00000503114 KDM2BQ8NHM5 1336 aa24.98■■□□□ 1.59
TRIM41-203ENST00000503114 TMEM132EQ6IEE7 984 aa24.98■■□□□ 1.59
TRIM41-203ENST00000503114 MYO5BQ9ULV0 1848 aa24.97■■□□□ 1.59
TRIM41-203ENST00000503114 ZFYVE9O95405 1425 aa24.97■■□□□ 1.59
TRIM41-203ENST00000503114 PDE4AP27815 886 aa24.97■■□□□ 1.59
TRIM41-203ENST00000503114 E9PSI1 815 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms