RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 IRX3P78415 501 aaPredicted RBP8.58□□□□□ -1.04
CLCN3-203ENST00000502998 TRIM44Q96DX7 344 aaPredicted RBP8.58□□□□□ -1.04
CLCN3-203ENST00000502998 SIGLEC1Q9BZZ2 1709 aa8.57□□□□□ -1.04
CLCN3-203ENST00000502998 DNAJC2Q99543 621 aaKnown RBP8.57□□□□□ -1.04
CLCN3-203ENST00000502998 NEO1Q92859 1461 aa8.57□□□□□ -1.04
CLCN3-203ENST00000502998 PLEKHD1A6NEE1 506 aa8.56□□□□□ -1.04
CLCN3-203ENST00000502998 RGS3P49796 1198 aa8.56□□□□□ -1.04
CLCN3-203ENST00000502998 TMED8Q6PL24 325 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-203ENST00000502998 SMAP1Q8IYB5 467 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-203ENST00000502998 PHLDB1Q86UU1 1377 aa8.56□□□□□ -1.04
CLCN3-203ENST00000502998 DISP3Q9P2K9 1392 aa8.56□□□□□ -1.04
CLCN3-203ENST00000502998 RIMS1Q86UR5 1692 aaKnown RBP8.56□□□□□ -1.04
CLCN3-203ENST00000502998 NBR1Q14596 966 aa8.55□□□□□ -1.04
CLCN3-203ENST00000502998 CERS3Q8IU89 383 aa8.55□□□□□ -1.04
CLCN3-203ENST00000502998 CEP120Q8N960 986 aa8.55□□□□□ -1.04
CLCN3-203ENST00000502998 DCBLD2Q96PD2 775 aa8.55□□□□□ -1.04
CLCN3-203ENST00000502998 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.54□□□□□ -1.04
CLCN3-203ENST00000502998 MAFGO15525 162 aa8.54□□□□□ -1.04
CLCN3-203ENST00000502998 UTP14CQ5TAP6 766 aaKnown RBP8.54□□□□□ -1.04
CLCN3-203ENST00000502998 CDK13Q14004 1512 aaKnown RBP8.54□□□□□ -1.04
CLCN3-203ENST00000502998 TTC37Q6PGP7 1564 aa8.53□□□□□ -1.04
CLCN3-203ENST00000502998 ARHGAP35Q9NRY4 1499 aa8.53□□□□□ -1.04
CLCN3-203ENST00000502998 TAF3Q5VWG9 929 aa8.53□□□□□ -1.04
CLCN3-203ENST00000502998 MIER1Q8N108 512 aa8.53□□□□□ -1.04
CLCN3-203ENST00000502998 ZNF579Q8NAF0 562 aaKnown RBP8.53□□□□□ -1.04
CLCN3-203ENST00000502998 ZNF830Q96NB3 372 aaPredicted RBP8.53□□□□□ -1.04
CLCN3-203ENST00000502998 TMEM51Q9NW97 253 aa8.53□□□□□ -1.04
CLCN3-203ENST00000502998 PATL2C9JE40 543 aaKnown RBP8.52□□□□□ -1.05
CLCN3-203ENST00000502998 ANAPC15P60006 121 aa8.52□□□□□ -1.05
CLCN3-203ENST00000502998 FAM43BQ6ZT52 329 aaPredicted RBP8.52□□□□□ -1.05
CLCN3-203ENST00000502998 MAP7D2Q96T17 732 aa8.52□□□□□ -1.05
CLCN3-203ENST00000502998 FMN1Q68DA7 1419 aa8.52□□□□□ -1.05
CLCN3-203ENST00000502998 AKNAQ7Z591 1439 aa8.52□□□□□ -1.05
CLCN3-203ENST00000502998 YEATS2Q9ULM3 1422 aa8.52□□□□□ -1.05
CLCN3-203ENST00000502998 FANCAO15360 1455 aa8.51□□□□□ -1.05
CLCN3-203ENST00000502998 HECW1Q76N89 1606 aa8.51□□□□□ -1.05
CLCN3-203ENST00000502998 ARHGEF40Q8TER5 1519 aa8.51□□□□□ -1.05
CLCN3-203ENST00000502998 GPATCH11Q8N954 259 aa8.51□□□□□ -1.05
CLCN3-203ENST00000502998 PRDM16Q9HAZ2 1276 aa8.51□□□□□ -1.05
CLCN3-203ENST00000502998 HDAC5Q9UQL6 1122 aa8.51□□□□□ -1.05
CLCN3-203ENST00000502998 CFAP74Q9C0B2 1584 aa8.51□□□□□ -1.05
CLCN3-203ENST00000502998 RICTORQ6R327 1708 aa8.51□□□□□ -1.05
CLCN3-203ENST00000502998 DENND4BO75064 1496 aaPredicted RBP8.51□□□□□ -1.05
CLCN3-203ENST00000502998 ATP1B4Q9UN42 357 aaPredicted RBP8.5□□□□□ -1.05
CLCN3-203ENST00000502998 STRCQ7RTU9 1775 aa8.49□□□□□ -1.05
CLCN3-203ENST00000502998 TPM2P07951 284 aa8.49□□□□□ -1.05
CLCN3-203ENST00000502998 PLCH2O75038 1416 aa8.48□□□□□ -1.05
CLCN3-203ENST00000502998 ZBTB7CA1YPR0 619 aa8.48□□□□□ -1.05
CLCN3-203ENST00000502998 APPP05067 770 aa8.48□□□□□ -1.05
CLCN3-203ENST00000502998 CEBPAP49715 358 aaPredicted RBP8.48□□□□□ -1.05
CLCN3-203ENST00000502998 ZRANB1Q9UGI0 708 aa8.48□□□□□ -1.05
CLCN3-203ENST00000502998 LRRIQ1Q96JM4 1722 aa8.48□□□□□ -1.05
CLCN3-203ENST00000502998 KIF14Q15058 1648 aa8.47□□□□□ -1.05
CLCN3-203ENST00000502998 TNNT2P45379 298 aaPredicted RBP8.47□□□□□ -1.05
CLCN3-203ENST00000502998 MLECQ14165 292 aa8.47□□□□□ -1.05
CLCN3-203ENST00000502998 NBPF20Q3BBV1 942 aa8.47□□□□□ -1.05
CLCN3-203ENST00000502998 LAS1LQ9Y4W2 734 aaKnown RBP8.47□□□□□ -1.05
CLCN3-203ENST00000502998 ZMYM4Q5VZL5 1548 aa8.47□□□□□ -1.05
CLCN3-203ENST00000502998 MYO5CQ9NQX4 1742 aa8.46□□□□□ -1.05
CLCN3-203ENST00000502998 ZFYVE16Q7Z3T8 1539 aa8.46□□□□□ -1.05
CLCN3-203ENST00000502998 OS9Q13438 667 aaPredicted RBP8.46□□□□□ -1.06
CLCN3-203ENST00000502998 TROQ12816 1431 aaPredicted RBP8.46□□□□□ -1.06
CLCN3-203ENST00000502998 POGZQ7Z3K3 1410 aa8.46□□□□□ -1.06
CLCN3-203ENST00000502998 SCAPERQ9BY12 1400 aa8.46□□□□□ -1.06
CLCN3-203ENST00000502998 SPATA31D1Q6ZQQ2 1576 aa8.45□□□□□ -1.06
CLCN3-203ENST00000502998 PSEN1P49768 467 aa8.45□□□□□ -1.06
CLCN3-203ENST00000502998 FKBP8Q14318 412 aa8.45□□□□□ -1.06
CLCN3-203ENST00000502998 GSE1Q14687 1217 aa8.45□□□□□ -1.06
CLCN3-203ENST00000502998 PLCD3Q8N3E9 789 aa8.45□□□□□ -1.06
CLCN3-203ENST00000502998 MAGI2Q86UL8 1455 aa8.45□□□□□ -1.06
CLCN3-203ENST00000502998 SLC20A2Q08357 652 aa8.44□□□□□ -1.06
CLCN3-203ENST00000502998 CWC22Q9HCG8 908 aaKnown RBP8.44□□□□□ -1.06
CLCN3-203ENST00000502998 CREBZFQ9NS37 354 aa8.44□□□□□ -1.06
CLCN3-203ENST00000502998 ARHGEF12Q9NZN5 1544 aa8.44□□□□□ -1.06
CLCN3-203ENST00000502998 FER1L4A9Z1Z3 1794 aa8.43□□□□□ -1.06
CLCN3-203ENST00000502998 GALR2O43603 387 aaPredicted RBP8.43□□□□□ -1.06
CLCN3-203ENST00000502998 KIF20AO95235 890 aa8.43□□□□□ -1.06
CLCN3-203ENST00000502998 CC2D1BQ5T0F9 858 aaKnown RBP8.43□□□□□ -1.06
CLCN3-203ENST00000502998 EFCAB2Q5VUJ9 269 aa8.43□□□□□ -1.06
CLCN3-203ENST00000502998 YY1AP1Q9H869 796 aa8.43□□□□□ -1.06
CLCN3-203ENST00000502998 KDM2AQ9Y2K7 1162 aa8.43□□□□□ -1.06
CLCN3-203ENST00000502998 CLIP1P30622 1438 aa8.43□□□□□ -1.06
CLCN3-203ENST00000502998 CASKIN1Q8WXD9 1431 aa8.43□□□□□ -1.06
CLCN3-203ENST00000502998 ARHGAP5Q13017 1502 aa8.43□□□□□ -1.06
CLCN3-203ENST00000502998 LTBP4Q8N2S1 1624 aa8.43□□□□□ -1.06
CLCN3-203ENST00000502998 SETD1BQ9UPS6 1966 aaKnown RBP8.42□□□□□ -1.06
CLCN3-203ENST00000502998 TTC36A6NLP5 189 aa8.42□□□□□ -1.06
CLCN3-203ENST00000502998 NBPF11Q86T75 865 aa8.42□□□□□ -1.06
CLCN3-203ENST00000502998 OTUD5Q96G74 571 aa8.42□□□□□ -1.06
CLCN3-203ENST00000502998 PNNQ9H307 717 aaKnown RBP8.42□□□□□ -1.06
CLCN3-203ENST00000502998 ZBTB47Q9UFB7 747 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-203ENST00000502998 STAG3Q9UJ98 1225 aa8.42□□□□□ -1.06
CLCN3-203ENST00000502998 CCDC18Q5T9S5 1454 aa8.42□□□□□ -1.06
CLCN3-203ENST00000502998 CDC42BPBQ9Y5S2 1711 aa8.41□□□□□ -1.06
CLCN3-203ENST00000502998 PREX1Q8TCU6 1659 aa8.41□□□□□ -1.06
CLCN3-203ENST00000502998 GOLGA6L3A6NEY3 463 aa8.41□□□□□ -1.06
CLCN3-203ENST00000502998 NBPF1Q3BBV0 1214 aa8.41□□□□□ -1.06
CLCN3-203ENST00000502998 MTERF4Q7Z6M4 381 aaKnown RBP8.41□□□□□ -1.06
CLCN3-203ENST00000502998 ZNF526Q8TF50 670 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-203ENST00000502998 IPO9Q96P70 1041 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms