RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 MYOM2P54296 1465 aa9.77□□□□□ -0.85
PDGFC-203ENST00000502773 PNNQ9H307 717 aaKnown RBP9.76□□□□□ -0.85
PDGFC-203ENST00000502773 PANK3Q9H999 370 aa9.76□□□□□ -0.85
PDGFC-203ENST00000502773 POGZQ7Z3K3 1410 aa9.76□□□□□ -0.85
PDGFC-203ENST00000502773 INO80Q9ULG1 1556 aaPredicted RBP9.76□□□□□ -0.85
PDGFC-203ENST00000502773 TRPM1Q7Z4N2 1603 aa9.76□□□□□ -0.85
PDGFC-203ENST00000502773 STAG3Q9UJ98 1225 aa9.75□□□□□ -0.85
PDGFC-203ENST00000502773 PARD3Q8TEW0 1356 aa9.75□□□□□ -0.85
PDGFC-203ENST00000502773 GGT6Q6P531 493 aa9.75□□□□□ -0.85
PDGFC-203ENST00000502773 PLA2R1Q13018 1463 aa9.75□□□□□ -0.85
PDGFC-203ENST00000502773 SBNO2Q9Y2G9 1366 aa9.74□□□□□ -0.85
PDGFC-203ENST00000502773 DEKP35659 375 aaKnown RBP9.74□□□□□ -0.85
PDGFC-203ENST00000502773 DEPDC5O75140 1603 aa9.74□□□□□ -0.85
PDGFC-203ENST00000502773 KIAA1210Q9ULL0 1709 aa9.73□□□□□ -0.85
PDGFC-203ENST00000502773 NINLQ9Y2I6 1382 aa9.73□□□□□ -0.85
PDGFC-203ENST00000502773 CENPJQ9HC77 1338 aaPredicted RBP9.73□□□□□ -0.85
PDGFC-203ENST00000502773 NEFMP07197 916 aa9.73□□□□□ -0.85
PDGFC-203ENST00000502773 NBPF1Q3BBV0 1214 aa9.73□□□□□ -0.85
PDGFC-203ENST00000502773 DAXXQ9UER7 740 aaPredicted RBP9.73□□□□□ -0.85
PDGFC-203ENST00000502773 EVC2Q86UK5 1308 aa9.73□□□□□ -0.85
PDGFC-203ENST00000502773 VWDEQ8N2E2 1590 aa9.72□□□□□ -0.85
PDGFC-203ENST00000502773 TESK2Q96S53 571 aa9.72□□□□□ -0.85
PDGFC-203ENST00000502773 SPHKAPQ2M3C7 1700 aa9.72□□□□□ -0.85
PDGFC-203ENST00000502773 LRPPRCP42704 1394 aaKnown RBP9.71□□□□□ -0.85
PDGFC-203ENST00000502773 CGNL1Q0VF96 1302 aa9.71□□□□□ -0.85
PDGFC-203ENST00000502773 CNGB1Q14028 1251 aaPredicted RBP9.71□□□□□ -0.85
PDGFC-203ENST00000502773 PLEKHG5O94827 1062 aa9.71□□□□□ -0.86
PDGFC-203ENST00000502773 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.71□□□□□ -0.86
PDGFC-203ENST00000502773 HECW2Q9P2P5 1572 aa9.71□□□□□ -0.86
PDGFC-203ENST00000502773 ARHGAP31Q2M1Z3 1444 aa9.71□□□□□ -0.86
PDGFC-203ENST00000502773 CC2D1BQ5T0F9 858 aaKnown RBP9.71□□□□□ -0.86
PDGFC-203ENST00000502773 EFCAB6Q5THR3 1501 aa9.7□□□□□ -0.86
PDGFC-203ENST00000502773 A0A0U1RQG5 324 aaPredicted RBP9.7□□□□□ -0.86
PDGFC-203ENST00000502773 AAMPQ13685 434 aa9.7□□□□□ -0.86
PDGFC-203ENST00000502773 RCAN3Q9UKA8 241 aa9.7□□□□□ -0.86
PDGFC-203ENST00000502773 C14orf93Q9H972 538 aaKnown RBP9.7□□□□□ -0.86
PDGFC-203ENST00000502773 NSD2O96028 1365 aa9.7□□□□□ -0.86
PDGFC-203ENST00000502773 CEP152O94986 1710 aa9.69□□□□□ -0.86
PDGFC-203ENST00000502773 MS4A1P11836 297 aa9.69□□□□□ -0.86
PDGFC-203ENST00000502773 SALL2Q9Y467 1007 aaPredicted RBP9.69□□□□□ -0.86
PDGFC-203ENST00000502773 KIF1BO60333 1816 aa9.69□□□□□ -0.86
PDGFC-203ENST00000502773 NCBP3Q53F19 620 aaKnown RBP9.69□□□□□ -0.86
PDGFC-203ENST00000502773 TERF2IPQ9NYB0 399 aa9.69□□□□□ -0.86
PDGFC-203ENST00000502773 PIK3C2GO75747 1445 aa9.68□□□□□ -0.86
PDGFC-203ENST00000502773 RNF17Q9BXT8 1623 aaKnown RBP9.68□□□□□ -0.86
PDGFC-203ENST00000502773 PER1O15534 1290 aaPredicted RBP9.68□□□□□ -0.86
PDGFC-203ENST00000502773 ASXL1Q8IXJ9 1541 aa9.68□□□□□ -0.86
PDGFC-203ENST00000502773 SYNMO15061 1565 aa9.68□□□□□ -0.86
PDGFC-203ENST00000502773 E9PCH4 1651 aa9.68□□□□□ -0.86
PDGFC-203ENST00000502773 MORC1Q86VD1 984 aa9.67□□□□□ -0.86
PDGFC-203ENST00000502773 GLI2P10070 1586 aa9.67□□□□□ -0.86
PDGFC-203ENST00000502773 GOLGA2Q08379 1002 aa9.67□□□□□ -0.86
PDGFC-203ENST00000502773 SETBP1Q9Y6X0 1596 aa9.67□□□□□ -0.86
PDGFC-203ENST00000502773 ZFYVE9O95405 1425 aa9.66□□□□□ -0.86
PDGFC-203ENST00000502773 HDGFL2Q7Z4V5 671 aaPredicted RBP9.66□□□□□ -0.86
PDGFC-203ENST00000502773 TSHZ2Q9NRE2 1034 aa9.66□□□□□ -0.86
PDGFC-203ENST00000502773 MADDQ8WXG6 1647 aa9.66□□□□□ -0.86
PDGFC-203ENST00000502773 POGKQ9P215 609 aa9.66□□□□□ -0.86
PDGFC-203ENST00000502773 BCORL1Q5H9F3 1711 aa9.66□□□□□ -0.86
PDGFC-203ENST00000502773 PPP2R1AP30153 589 aa9.66□□□□□ -0.86
PDGFC-203ENST00000502773 ANP32AP39687 249 aaKnown RBP9.66□□□□□ -0.86
PDGFC-203ENST00000502773 ATAD2Q6PL18 1390 aa9.65□□□□□ -0.86
PDGFC-203ENST00000502773 DISP3Q9P2K9 1392 aa9.65□□□□□ -0.86
PDGFC-203ENST00000502773 CFAP70Q5T0N1 1121 aa9.65□□□□□ -0.86
PDGFC-203ENST00000502773 ZC3H13Q5T200 1668 aaKnown RBP9.65□□□□□ -0.86
PDGFC-203ENST00000502773 MAP3K4Q9Y6R4 1608 aa9.65□□□□□ -0.87
PDGFC-203ENST00000502773 E9PSI1 815 aa9.64□□□□□ -0.87
PDGFC-203ENST00000502773 RNF123Q5XPI4 1314 aa9.64□□□□□ -0.87
PDGFC-203ENST00000502773 TCERG1O14776 1098 aaKnown RBP9.64□□□□□ -0.87
PDGFC-203ENST00000502773 FAM69CQ0P6D2 419 aa9.64□□□□□ -0.87
PDGFC-203ENST00000502773 CHMP4BQ9H444 224 aaKnown RBP9.64□□□□□ -0.87
PDGFC-203ENST00000502773 RRP1P56182 461 aaKnown RBP9.64□□□□□ -0.87
PDGFC-203ENST00000502773 KDM5AP29375 1690 aaKnown RBP9.64□□□□□ -0.87
PDGFC-203ENST00000502773 CLTCL1P53675 1640 aa9.64□□□□□ -0.87
PDGFC-203ENST00000502773 CCDC184Q52MB2 194 aa9.63□□□□□ -0.87
PDGFC-203ENST00000502773 NOS1P29475 1434 aa9.63□□□□□ -0.87
PDGFC-203ENST00000502773 CYB5RLQ6IPT4 315 aa9.63□□□□□ -0.87
PDGFC-203ENST00000502773 FANCIQ9NVI1 1328 aa9.62□□□□□ -0.87
PDGFC-203ENST00000502773 VSIG10Q8N0Z9 540 aa9.62□□□□□ -0.87
PDGFC-203ENST00000502773 KIDINS220Q9ULH0 1771 aa9.62□□□□□ -0.87
PDGFC-203ENST00000502773 NRXN1Q9ULB1 1477 aa9.62□□□□□ -0.87
PDGFC-203ENST00000502773 CALD1Q05682 793 aaKnown RBP9.62□□□□□ -0.87
PDGFC-203ENST00000502773 ADGRB3O60242 1522 aa9.62□□□□□ -0.87
PDGFC-203ENST00000502773 NPATQ14207 1427 aa9.62□□□□□ -0.87
PDGFC-203ENST00000502773 ABCC3O15438 1527 aa9.61□□□□□ -0.87
PDGFC-203ENST00000502773 BLMP54132 1417 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-203ENST00000502773 CANXP27824 592 aaKnown RBP9.61□□□□□ -0.87
PDGFC-203ENST00000502773 AMER1Q5JTC6 1135 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-203ENST00000502773 IQGAP1P46940 1657 aa9.61□□□□□ -0.87
PDGFC-203ENST00000502773 ADGRF5Q8IZF2 1346 aa9.61□□□□□ -0.87
PDGFC-203ENST00000502773 MYH16Q9H6N6 1097 aa9.61□□□□□ -0.87
PDGFC-203ENST00000502773 TRAK1Q9UPV9 953 aa9.61□□□□□ -0.87
PDGFC-203ENST00000502773 CT47B1P0C2W7 299 aaPredicted RBP9.6□□□□□ -0.87
PDGFC-203ENST00000502773 HAP1P54257 671 aaPredicted RBP9.6□□□□□ -0.87
PDGFC-203ENST00000502773 POLR3AO14802 1390 aaPredicted RBP9.6□□□□□ -0.87
PDGFC-203ENST00000502773 RBM19Q9Y4C8 960 aaKnown RBP9.6□□□□□ -0.87
PDGFC-203ENST00000502773 UBE2Q2Q8WVN8 375 aa9.6□□□□□ -0.87
PDGFC-203ENST00000502773 SRPK2P78362 688 aaKnown RBP9.59□□□□□ -0.87
PDGFC-203ENST00000502773 RAPGEF3O95398 923 aa9.59□□□□□ -0.87
PDGFC-203ENST00000502773 RUNDC1Q96C34 613 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms