RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 MTERF4Q7Z6M4 381 aaKnown RBP21.31■■□□□ 1
HMGXB3-201ENST00000502717 KIAA1211Q6ZU35 1233 aa21.3■■□□□ 1
HMGXB3-201ENST00000502717 DZIP1LQ8IYY4 767 aaKnown RBP21.3■■□□□ 1
HMGXB3-201ENST00000502717 ANKRD50Q9ULJ7 1429 aa21.3■■□□□ 1
HMGXB3-201ENST00000502717 ANKRD45Q5TZF3 282 aa21.3■■□□□ 1
HMGXB3-201ENST00000502717 FGD1P98174 961 aa21.29■■□□□ 1
HMGXB3-201ENST00000502717 SAFB2Q14151 953 aaKnown RBP eCLIP21.29■■□□□ 1
HMGXB3-201ENST00000502717 RRP9O43818 475 aaKnown RBP21.29■■□□□ 1
HMGXB3-201ENST00000502717 PDE3AQ14432 1141 aa21.29■■□□□ 1
HMGXB3-201ENST00000502717 HDGFL2Q7Z4V5 671 aaPredicted RBP21.29■■□□□ 1
HMGXB3-201ENST00000502717 HMMRO75330 724 aa21.28■■□□□ 1
HMGXB3-201ENST00000502717 MAP3K1Q13233 1512 aa21.28■■□□□ 1
HMGXB3-201ENST00000502717 STK26Q9P289 416 aa21.27■■□□□ 1
HMGXB3-201ENST00000502717 NASPP49321 788 aaPredicted RBP21.27■■□□□ 1
HMGXB3-201ENST00000502717 NUCB2P80303 420 aa21.27■■□□□ 1
HMGXB3-201ENST00000502717 PANK1Q8TE04 598 aa21.27■■□□□ 1
HMGXB3-201ENST00000502717 CCDC9Q9Y3X0 531 aaKnown RBP21.26■□□□□ 0.99
HMGXB3-201ENST00000502717 SYNJ2O15056 1496 aa21.26■□□□□ 0.99
HMGXB3-201ENST00000502717 NAIPQ13075 1403 aa21.26■□□□□ 0.99
HMGXB3-201ENST00000502717 CUL7Q14999 1698 aa21.25■□□□□ 0.99
HMGXB3-201ENST00000502717 SNAPC4Q5SXM2 1469 aa21.25■□□□□ 0.99
HMGXB3-201ENST00000502717 HECW1Q76N89 1606 aa21.25■□□□□ 0.99
HMGXB3-201ENST00000502717 HTATSF1O43719 755 aaKnown RBP21.24■□□□□ 0.99
HMGXB3-201ENST00000502717 UBE2Q2Q8WVN8 375 aa21.24■□□□□ 0.99
HMGXB3-201ENST00000502717 KIAA0586Q9BVV6 1533 aa21.23■□□□□ 0.99
HMGXB3-201ENST00000502717 PRG4Q92954 1404 aaPredicted RBP21.23■□□□□ 0.99
HMGXB3-201ENST00000502717 RUNDC1Q96C34 613 aa21.23■□□□□ 0.99
HMGXB3-201ENST00000502717 TROQ12816 1431 aaPredicted RBP21.23■□□□□ 0.99
HMGXB3-201ENST00000502717 C11orf95C9JLR9 678 aaPredicted RBP21.22■□□□□ 0.99
HMGXB3-201ENST00000502717 CCDC173Q0VFZ6 552 aa21.22■□□□□ 0.99
HMGXB3-201ENST00000502717 KIF16BQ96L93 1317 aa21.21■□□□□ 0.99
HMGXB3-201ENST00000502717 NCOA1Q15788 1441 aa21.21■□□□□ 0.99
HMGXB3-201ENST00000502717 R3HCC1Q9Y3T6 440 aaKnown RBP21.2■□□□□ 0.99
HMGXB3-201ENST00000502717 MAPKBP1O60336 1514 aa21.2■□□□□ 0.98
HMGXB3-201ENST00000502717 GRPEL1Q9HAV7 217 aa21.2■□□□□ 0.98
HMGXB3-201ENST00000502717 NINLQ9Y2I6 1382 aa21.2■□□□□ 0.98
HMGXB3-201ENST00000502717 CSB-PGBD3P0DP91 1061 aa21.2■□□□□ 0.98
HMGXB3-201ENST00000502717 MCM4P33991 863 aa21.2■□□□□ 0.98
HMGXB3-201ENST00000502717 FOXD4L5Q5VV16 416 aaPredicted RBP21.2■□□□□ 0.98
HMGXB3-201ENST00000502717 FOXD4L4Q8WXT5 416 aaPredicted RBP21.2■□□□□ 0.98
HMGXB3-201ENST00000502717 AMER1Q5JTC6 1135 aaPredicted RBP21.19■□□□□ 0.98
HMGXB3-201ENST00000502717 PDZRN3Q9UPQ7 1066 aa21.19■□□□□ 0.98
HMGXB3-201ENST00000502717 ESPNB1AK53 854 aa21.19■□□□□ 0.98
HMGXB3-201ENST00000502717 TERF2IPQ9NYB0 399 aa21.19■□□□□ 0.98
HMGXB3-201ENST00000502717 PPP2R1AP30153 589 aa21.18■□□□□ 0.98
HMGXB3-201ENST00000502717 LMOD3Q0VAK6 560 aa21.18■□□□□ 0.98
HMGXB3-201ENST00000502717 STAC3Q96MF2 364 aa21.18■□□□□ 0.98
HMGXB3-201ENST00000502717 REC8O95072 547 aa21.18■□□□□ 0.98
HMGXB3-201ENST00000502717 TRIM6-TRIM34B2RNG4 842 aa21.17■□□□□ 0.98
HMGXB3-201ENST00000502717 KIAA1107Q9UPP5 1409 aa21.17■□□□□ 0.98
HMGXB3-201ENST00000502717 ATP6V1DQ9Y5K8 247 aa21.17■□□□□ 0.98
HMGXB3-201ENST00000502717 RTF1Q92541 710 aaKnown RBP21.16■□□□□ 0.98
HMGXB3-201ENST00000502717 CCDC39Q9UFE4 941 aa21.16■□□□□ 0.98
HMGXB3-201ENST00000502717 SUPT6HQ7KZ85 1726 aaKnown RBP21.16■□□□□ 0.98
HMGXB3-201ENST00000502717 MCTP1Q6DN14 999 aa21.16■□□□□ 0.98
HMGXB3-201ENST00000502717 NOL8Q76FK4 1167 aaKnown RBP21.16■□□□□ 0.98
HMGXB3-201ENST00000502717 PCF11O94913 1555 aaKnown RBP21.16■□□□□ 0.98
HMGXB3-201ENST00000502717 IQGAP2Q13576 1575 aa21.16■□□□□ 0.98
HMGXB3-201ENST00000502717 EPRSP07814 1512 aaKnown RBP21.15■□□□□ 0.98
HMGXB3-201ENST00000502717 SOX12O15370 315 aa21.15■□□□□ 0.98
HMGXB3-201ENST00000502717 TNNT3P45378 269 aaPredicted RBP21.15■□□□□ 0.98
HMGXB3-201ENST00000502717 FAM69CQ0P6D2 419 aa21.15■□□□□ 0.98
HMGXB3-201ENST00000502717 LNPKQ9C0E8 428 aa21.14■□□□□ 0.97
HMGXB3-201ENST00000502717 DNAJC5BQ9UF47 199 aa21.13■□□□□ 0.97
HMGXB3-201ENST00000502717 URB2Q14146 1524 aaKnown RBP21.13■□□□□ 0.97
HMGXB3-201ENST00000502717 BCAR3O75815 825 aa21.12■□□□□ 0.97
HMGXB3-201ENST00000502717 NAP1L2Q9ULW6 460 aaPredicted RBP21.12■□□□□ 0.97
HMGXB3-201ENST00000502717 VGFO15240 615 aaPredicted RBP21.12■□□□□ 0.97
HMGXB3-201ENST00000502717 TRAK1Q9UPV9 953 aa21.12■□□□□ 0.97
HMGXB3-201ENST00000502717 ARHGAP5Q13017 1502 aa21.11■□□□□ 0.97
HMGXB3-201ENST00000502717 CIZ1Q9ULV3 898 aaPredicted RBP21.1■□□□□ 0.97
HMGXB3-201ENST00000502717 STK31Q9BXU1 1019 aa21.09■□□□□ 0.97
HMGXB3-201ENST00000502717 ZNF771Q7L3S4 317 aaPredicted RBP21.09■□□□□ 0.97
HMGXB3-201ENST00000502717 INTS3Q68E01 1043 aaKnown RBP21.09■□□□□ 0.97
HMGXB3-201ENST00000502717 C9orf84Q5VXU9 1444 aa21.08■□□□□ 0.97
HMGXB3-201ENST00000502717 DAPK1P53355 1430 aa21.08■□□□□ 0.96
HMGXB3-201ENST00000502717 CDC45O75419 566 aa21.07■□□□□ 0.96
HMGXB3-201ENST00000502717 TPM4P67936 248 aa21.07■□□□□ 0.96
HMGXB3-201ENST00000502717 PLEKHH2Q8IVE3 1493 aa21.07■□□□□ 0.96
HMGXB3-201ENST00000502717 TMX4Q9H1E5 349 aaPredicted RBP21.07■□□□□ 0.96
HMGXB3-201ENST00000502717 ANKRD30BQ9BXX2 1392 aa21.06■□□□□ 0.96
HMGXB3-201ENST00000502717 NUTM2DQ5VT03 806 aaPredicted RBP21.06■□□□□ 0.96
HMGXB3-201ENST00000502717 API5Q9BZZ5 524 aaKnown RBP21.06■□□□□ 0.96
HMGXB3-201ENST00000502717 CAVIN1Q6NZI2 390 aaKnown RBP21.06■□□□□ 0.96
HMGXB3-201ENST00000502717 CDK13Q14004 1512 aaKnown RBP21.06■□□□□ 0.96
HMGXB3-201ENST00000502717 MBD3O95983 291 aa21.05■□□□□ 0.96
HMGXB3-201ENST00000502717 DIAPH3Q9NSV4 1193 aa21.05■□□□□ 0.96
HMGXB3-201ENST00000502717 ROCK1Q13464 1354 aa21.05■□□□□ 0.96
HMGXB3-201ENST00000502717 HMGN5P82970 282 aaKnown RBP21.04■□□□□ 0.96
HMGXB3-201ENST00000502717 TCP11L2Q8N4U5 519 aa21.04■□□□□ 0.96
HMGXB3-201ENST00000502717 SLFN5Q08AF3 891 aa21.04■□□□□ 0.96
HMGXB3-201ENST00000502717 SLC4A10Q6U841 1118 aa21.04■□□□□ 0.96
HMGXB3-201ENST00000502717 RBM10P98175 930 aaKnown RBP21.03■□□□□ 0.96
HMGXB3-201ENST00000502717 FOXD4L6Q3SYB3 417 aaPredicted RBP21.03■□□□□ 0.96
HMGXB3-201ENST00000502717 FOXD4L3Q6VB84 417 aaPredicted RBP21.03■□□□□ 0.96
HMGXB3-201ENST00000502717 ELL2O00472 640 aaPredicted RBP21.03■□□□□ 0.96
HMGXB3-201ENST00000502717 SKAP1Q86WV1 359 aa21.03■□□□□ 0.96
HMGXB3-201ENST00000502717 AFAP1Q8N556 730 aa21.03■□□□□ 0.96
HMGXB3-201ENST00000502717 CHMP4AQ9BY43 222 aa21.02■□□□□ 0.96
HMGXB3-201ENST00000502717 RIPK4P57078 832 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms