RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 KIDINS220Q9ULH0 1771 aa22.12■■□□□ 1.13
VCAN-204ENST00000502527 SLC24A1O60721 1099 aa22.11■■□□□ 1.13
VCAN-204ENST00000502527 CCDC136Q96JN2 1154 aa22.11■■□□□ 1.13
VCAN-204ENST00000502527 LMTK2Q8IWU2 1503 aa22.11■■□□□ 1.13
VCAN-204ENST00000502527 SYNMO15061 1565 aa22.11■■□□□ 1.13
VCAN-204ENST00000502527 OSCARQ8IYS5 282 aa22.1■■□□□ 1.13
VCAN-204ENST00000502527 RCAN3Q9UKA8 241 aa22.09■■□□□ 1.13
VCAN-204ENST00000502527 SALL2Q9Y467 1007 aaPredicted RBP22.09■■□□□ 1.13
VCAN-204ENST00000502527 RRP1P56182 461 aaKnown RBP22.08■■□□□ 1.12
VCAN-204ENST00000502527 MAP3K4Q9Y6R4 1608 aa22.08■■□□□ 1.12
VCAN-204ENST00000502527 AMER1Q5JTC6 1135 aaPredicted RBP22.07■■□□□ 1.12
VCAN-204ENST00000502527 CFAP74Q9C0B2 1584 aa22.07■■□□□ 1.12
VCAN-204ENST00000502527 CD109Q6YHK3 1445 aa22.07■■□□□ 1.12
VCAN-204ENST00000502527 UGGT1Q9NYU2 1555 aa22.07■■□□□ 1.12
VCAN-204ENST00000502527 PPRC1Q5VV67 1664 aaKnown RBP22.05■■□□□ 1.12
VCAN-204ENST00000502527 CFAP70Q5T0N1 1121 aa22.05■■□□□ 1.12
VCAN-204ENST00000502527 POGZQ7Z3K3 1410 aa22.05■■□□□ 1.12
VCAN-204ENST00000502527 KIF1BO60333 1816 aa22.05■■□□□ 1.12
VCAN-204ENST00000502527 PPP2R1AP30153 589 aa22.05■■□□□ 1.12
VCAN-204ENST00000502527 NPC1L1Q9UHC9 1359 aa22.04■■□□□ 1.12
VCAN-204ENST00000502527 ADGRF5Q8IZF2 1346 aa22.04■■□□□ 1.12
VCAN-204ENST00000502527 ASXL1Q8IXJ9 1541 aa22.04■■□□□ 1.12
VCAN-204ENST00000502527 MLH3Q9UHC1 1453 aa22.03■■□□□ 1.12
VCAN-204ENST00000502527 ABCA6Q8N139 1617 aa22.03■■□□□ 1.12
VCAN-204ENST00000502527 NRXN1Q9ULB1 1477 aa22.02■■□□□ 1.11
VCAN-204ENST00000502527 ADAMTS8Q9UP79 889 aa22■■□□□ 1.11
VCAN-204ENST00000502527 KDM5AP29375 1690 aaKnown RBP22■■□□□ 1.11
VCAN-204ENST00000502527 CDCA7LQ96GN5 454 aa22■■□□□ 1.11
VCAN-204ENST00000502527 IFT172Q9UG01 1749 aa22■■□□□ 1.11
VCAN-204ENST00000502527 WDR43Q15061 677 aaKnown RBP eCLIP21.99■■□□□ 1.11
VCAN-204ENST00000502527 MYOM1P52179 1685 aa21.99■■□□□ 1.11
VCAN-204ENST00000502527 PIK3C2GO75747 1445 aa21.99■■□□□ 1.11
VCAN-204ENST00000502527 ADGRB3O60242 1522 aa21.98■■□□□ 1.11
VCAN-204ENST00000502527 MSH5O43196 834 aa21.97■■□□□ 1.11
VCAN-204ENST00000502527 ERVK-7P63135 1459 aa21.97■■□□□ 1.11
VCAN-204ENST00000502527 FRMPD1Q5SYB0 1578 aa21.97■■□□□ 1.11
VCAN-204ENST00000502527 HECW2Q9P2P5 1572 aa21.97■■□□□ 1.11
VCAN-204ENST00000502527 MROH2AA6NES4 1674 aa21.96■■□□□ 1.11
VCAN-204ENST00000502527 NPATQ14207 1427 aa21.96■■□□□ 1.11
VCAN-204ENST00000502527 SBNO2Q9Y2G9 1366 aa21.95■■□□□ 1.1
VCAN-204ENST00000502527 NOS1P29475 1434 aa21.95■■□□□ 1.1
VCAN-204ENST00000502527 GGT6Q6P531 493 aa21.95■■□□□ 1.1
VCAN-204ENST00000502527 EXOC6Q8TAG9 804 aa21.94■■□□□ 1.1
VCAN-204ENST00000502527 CHGAP10645 457 aaKnown RBP21.94■■□□□ 1.1
VCAN-204ENST00000502527 SETBP1Q9Y6X0 1596 aa21.93■■□□□ 1.1
VCAN-204ENST00000502527 MYO3AQ8NEV4 1616 aa21.92■■□□□ 1.1
VCAN-204ENST00000502527 NEO1Q92859 1461 aa21.92■■□□□ 1.1
VCAN-204ENST00000502527 RPGRIP1LQ68CZ1 1315 aa21.92■■□□□ 1.1
VCAN-204ENST00000502527 CENPJQ9HC77 1338 aaPredicted RBP21.9■■□□□ 1.1
VCAN-204ENST00000502527 ABCC3O15438 1527 aa21.9■■□□□ 1.1
VCAN-204ENST00000502527 C14orf93Q9H972 538 aaKnown RBP21.89■■□□□ 1.1
VCAN-204ENST00000502527 CARD14Q9BXL6 1004 aa21.86■■□□□ 1.09
VCAN-204ENST00000502527 PLEKHH1Q9ULM0 1364 aa21.86■■□□□ 1.09
VCAN-204ENST00000502527 ZNF521Q96K83 1311 aa21.85■■□□□ 1.09
VCAN-204ENST00000502527 PPLO60437 1756 aa21.85■■□□□ 1.09
VCAN-204ENST00000502527 ERICH6Q7L0X2 663 aa21.85■■□□□ 1.09
VCAN-204ENST00000502527 RAPGEF3O95398 923 aa21.84■■□□□ 1.09
VCAN-204ENST00000502527 GOLGA2Q08379 1002 aa21.83■■□□□ 1.09
VCAN-204ENST00000502527 TRAK1Q9UPV9 953 aa21.83■■□□□ 1.09
VCAN-204ENST00000502527 ADGRB1O14514 1584 aa21.82■■□□□ 1.08
VCAN-204ENST00000502527 CAMSAP1Q5T5Y3 1602 aa21.82■■□□□ 1.08
VCAN-204ENST00000502527 PLIN1O60240 522 aa21.81■■□□□ 1.08
VCAN-204ENST00000502527 DUSP27Q5VZP5 1158 aa21.81■■□□□ 1.08
VCAN-204ENST00000502527 DIP2CQ9Y2E4 1556 aa21.79■■□□□ 1.08
VCAN-204ENST00000502527 VGFO15240 615 aaPredicted RBP21.79■■□□□ 1.08
VCAN-204ENST00000502527 TCERG1O14776 1098 aaKnown RBP21.78■■□□□ 1.08
VCAN-204ENST00000502527 ARHGAP31Q2M1Z3 1444 aa21.78■■□□□ 1.08
VCAN-204ENST00000502527 NGEFQ8N5V2 710 aa21.78■■□□□ 1.08
VCAN-204ENST00000502527 CFAP65Q6ZU64 1925 aaKnown RBP21.77■■□□□ 1.08
VCAN-204ENST00000502527 TMEM132EQ6IEE7 984 aa21.77■■□□□ 1.08
VCAN-204ENST00000502527 CRBNQ96SW2 442 aa21.77■■□□□ 1.08
VCAN-204ENST00000502527 SLFN5Q08AF3 891 aa21.76■■□□□ 1.07
VCAN-204ENST00000502527 CCDC146Q8IYE0 955 aa21.76■■□□□ 1.07
VCAN-204ENST00000502527 QRICH2Q9H0J4 1663 aa21.76■■□□□ 1.07
VCAN-204ENST00000502527 PIK3C2BO00750 1634 aa21.76■■□□□ 1.07
VCAN-204ENST00000502527 POLR3AO14802 1390 aaPredicted RBP21.76■■□□□ 1.07
VCAN-204ENST00000502527 ZC3H13Q5T200 1668 aaKnown RBP21.76■■□□□ 1.07
VCAN-204ENST00000502527 NSD3Q9BZ95 1437 aa21.75■■□□□ 1.07
VCAN-204ENST00000502527 APAF1O14727 1248 aa21.75■■□□□ 1.07
VCAN-204ENST00000502527 PUS7Q96PZ0 661 aaKnown RBP21.75■■□□□ 1.07
VCAN-204ENST00000502527 TRMT2AQ8IZ69 625 aaKnown RBP21.74■■□□□ 1.07
VCAN-204ENST00000502527 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.74■■□□□ 1.07
VCAN-204ENST00000502527 SIGLEC1Q9BZZ2 1709 aa21.74■■□□□ 1.07
VCAN-204ENST00000502527 ANP32AP39687 249 aaKnown RBP21.73■■□□□ 1.07
VCAN-204ENST00000502527 MORC1Q86VD1 984 aa21.73■■□□□ 1.07
VCAN-204ENST00000502527 SLC12A5Q9H2X9 1139 aa21.73■■□□□ 1.07
VCAN-204ENST00000502527 MS4A1P11836 297 aa21.72■■□□□ 1.07
VCAN-204ENST00000502527 NEXMIFQ5QGS0 1516 aa21.72■■□□□ 1.07
VCAN-204ENST00000502527 SLC52A1Q9NWF4 448 aa21.71■■□□□ 1.07
VCAN-204ENST00000502527 RICTORQ6R327 1708 aa21.71■■□□□ 1.07
VCAN-204ENST00000502527 EVC2Q86UK5 1308 aa21.71■■□□□ 1.07
VCAN-204ENST00000502527 GLI2P10070 1586 aa21.7■■□□□ 1.06
VCAN-204ENST00000502527 E9PSI1 815 aa21.7■■□□□ 1.06
VCAN-204ENST00000502527 IDI1Q13907 227 aa21.69■■□□□ 1.06
VCAN-204ENST00000502527 C20orf194Q5TEA3 1177 aa21.69■■□□□ 1.06
VCAN-204ENST00000502527 ZFYVE9O95405 1425 aa21.69■■□□□ 1.06
VCAN-204ENST00000502527 CGNL1Q0VF96 1302 aa21.68■■□□□ 1.06
VCAN-204ENST00000502527 NUTM2DQ5VT03 806 aaPredicted RBP21.68■■□□□ 1.06
VCAN-204ENST00000502527 NOP58Q9Y2X3 529 aaKnown RBP21.68■■□□□ 1.06
VCAN-204ENST00000502527 YEATS2Q9ULM3 1422 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms