RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 CLTCQ00610 1675 aaKnown RBP25.29■■□□□ 1.64
LINC00535-201ENST00000501400 SCAF11Q99590 1463 aaKnown RBP25.28■■□□□ 1.64
LINC00535-201ENST00000501400 POLR3GLQ9BT43 218 aa25.27■■□□□ 1.64
LINC00535-201ENST00000501400 SCAF1Q9H7N4 1312 aaKnown RBP25.26■■□□□ 1.63
LINC00535-201ENST00000501400 PRKRIP1Q9H875 184 aaPredicted RBP25.25■■□□□ 1.63
LINC00535-201ENST00000501400 DISP3Q9P2K9 1392 aa25.25■■□□□ 1.63
LINC00535-201ENST00000501400 NEXMIFQ5QGS0 1516 aa25.25■■□□□ 1.63
LINC00535-201ENST00000501400 ERVK-7P63135 1459 aa25.24■■□□□ 1.63
LINC00535-201ENST00000501400 MYO5BQ9ULV0 1848 aa25.24■■□□□ 1.63
LINC00535-201ENST00000501400 PIK3C2GO75747 1445 aa25.24■■□□□ 1.63
LINC00535-201ENST00000501400 CHGAP10645 457 aaKnown RBP25.24■■□□□ 1.63
LINC00535-201ENST00000501400 TMEM131LA2VDJ0 1609 aa25.21■■□□□ 1.63
LINC00535-201ENST00000501400 SETBP1Q9Y6X0 1596 aa25.21■■□□□ 1.63
LINC00535-201ENST00000501400 CFAP70Q5T0N1 1121 aa25.21■■□□□ 1.63
LINC00535-201ENST00000501400 PPP6R1Q9UPN7 881 aa25.2■■□□□ 1.62
LINC00535-201ENST00000501400 RPGRIP1LQ68CZ1 1315 aa25.19■■□□□ 1.62
LINC00535-201ENST00000501400 IDI1Q13907 227 aa25.18■■□□□ 1.62
LINC00535-201ENST00000501400 SPATA31D1Q6ZQQ2 1576 aa25.18■■□□□ 1.62
LINC00535-201ENST00000501400 SLC52A1Q9NWF4 448 aa25.17■■□□□ 1.62
LINC00535-201ENST00000501400 ADGRB1O14514 1584 aa25.17■■□□□ 1.62
LINC00535-201ENST00000501400 MYO3AQ8NEV4 1616 aa25.17■■□□□ 1.62
LINC00535-201ENST00000501400 FBXO31Q5XUX0 539 aaPredicted RBP25.16■■□□□ 1.62
LINC00535-201ENST00000501400 EIF3AQ14152 1382 aaKnown RBP25.14■■□□□ 1.61
LINC00535-201ENST00000501400 CCDC184Q52MB2 194 aa25.14■■□□□ 1.61
LINC00535-201ENST00000501400 TMF1P82094 1093 aa25.13■■□□□ 1.61
LINC00535-201ENST00000501400 MLECQ14165 292 aa25.12■■□□□ 1.61
LINC00535-201ENST00000501400 ZFYVE9O95405 1425 aa25.1■■□□□ 1.61
LINC00535-201ENST00000501400 C14orf93Q9H972 538 aaKnown RBP25.1■■□□□ 1.61
LINC00535-201ENST00000501400 MYOM1P52179 1685 aa25.09■■□□□ 1.61
LINC00535-201ENST00000501400 GTF3C3Q9Y5Q9 886 aa25.07■■□□□ 1.6
LINC00535-201ENST00000501400 KDM5AP29375 1690 aaKnown RBP25.05■■□□□ 1.6
LINC00535-201ENST00000501400 NUTM2DQ5VT03 806 aaPredicted RBP25.04■■□□□ 1.6
LINC00535-201ENST00000501400 ASXL1Q8IXJ9 1541 aa25.04■■□□□ 1.6
LINC00535-201ENST00000501400 VGFO15240 615 aaPredicted RBP25.03■■□□□ 1.6
LINC00535-201ENST00000501400 QRICH2Q9H0J4 1663 aa25.03■■□□□ 1.6
LINC00535-201ENST00000501400 PER1O15534 1290 aaPredicted RBP25.02■■□□□ 1.6
LINC00535-201ENST00000501400 SBNO2Q9Y2G9 1366 aa25.02■■□□□ 1.6
LINC00535-201ENST00000501400 ARHGEF28Q8N1W1 1705 aaKnown RBP25.02■■□□□ 1.6
LINC00535-201ENST00000501400 MRS2Q9HD23 443 aa25.01■■□□□ 1.59
LINC00535-201ENST00000501400 ZMYM3Q14202 1370 aa25.01■■□□□ 1.59
LINC00535-201ENST00000501400 A2ML1A8K2U0 1454 aa25.01■■□□□ 1.59
LINC00535-201ENST00000501400 CNGB1Q14028 1251 aaPredicted RBP24.99■■□□□ 1.59
LINC00535-201ENST00000501400 KTN1Q86UP2 1357 aaKnown RBP24.98■■□□□ 1.59
LINC00535-201ENST00000501400 TMEM132EQ6IEE7 984 aa24.98■■□□□ 1.59
LINC00535-201ENST00000501400 DNAJC5Q9H3Z4 198 aa24.97■■□□□ 1.59
LINC00535-201ENST00000501400 PANK3Q9H999 370 aa24.96■■□□□ 1.59
LINC00535-201ENST00000501400 PARD3Q8TEW0 1356 aa24.96■■□□□ 1.59
LINC00535-201ENST00000501400 CENPJQ9HC77 1338 aaPredicted RBP24.95■■□□□ 1.58
LINC00535-201ENST00000501400 TRHP20396 242 aaPredicted RBP24.95■■□□□ 1.58
LINC00535-201ENST00000501400 CDCA8Q53HL2 280 aa24.95■■□□□ 1.58
LINC00535-201ENST00000501400 TRAK1Q9UPV9 953 aa24.94■■□□□ 1.58
LINC00535-201ENST00000501400 ESF1Q9H501 851 aaKnown RBP24.92■■□□□ 1.58
LINC00535-201ENST00000501400 RALBP1Q15311 655 aa24.92■■□□□ 1.58
LINC00535-201ENST00000501400 ALKQ9UM73 1620 aa24.91■■□□□ 1.58
LINC00535-201ENST00000501400 SETD1AO15047 1707 aaKnown RBP24.91■■□□□ 1.58
LINC00535-201ENST00000501400 MYBBP1AQ9BQG0 1328 aaKnown RBP24.9■■□□□ 1.58
LINC00535-201ENST00000501400 SLC24A1O60721 1099 aa24.9■■□□□ 1.58
LINC00535-201ENST00000501400 RIMS2Q9UQ26 1411 aa24.89■■□□□ 1.58
LINC00535-201ENST00000501400 HNRNPUQ00839 825 aaKnown RBP eCLIP24.88■■□□□ 1.57
LINC00535-201ENST00000501400 STAG3Q9UJ98 1225 aa24.88■■□□□ 1.57
LINC00535-201ENST00000501400 TNRQ92752 1358 aa24.88■■□□□ 1.57
LINC00535-201ENST00000501400 FAM9BQ8IZU0 186 aa24.88■■□□□ 1.57
LINC00535-201ENST00000501400 UBR1Q8IWV7 1749 aa24.87■■□□□ 1.57
LINC00535-201ENST00000501400 FER1L4A9Z1Z3 1794 aa24.87■■□□□ 1.57
LINC00535-201ENST00000501400 BRD4O60885 1362 aaPredicted RBP24.86■■□□□ 1.57
LINC00535-201ENST00000501400 NRXN3Q9Y4C0 1643 aa24.86■■□□□ 1.57
LINC00535-201ENST00000501400 TULP4Q9NRJ4 1543 aa24.86■■□□□ 1.57
LINC00535-201ENST00000501400 C3P01024 1663 aa24.86■■□□□ 1.57
LINC00535-201ENST00000501400 PTPRMP28827 1452 aa24.85■■□□□ 1.57
LINC00535-201ENST00000501400 SENP3Q9H4L4 574 aaPredicted RBP24.84■■□□□ 1.57
LINC00535-201ENST00000501400 YTHDC2Q9H6S0 1430 aaKnown RBP24.82■■□□□ 1.56
LINC00535-201ENST00000501400 CC2D1BQ5T0F9 858 aaKnown RBP24.82■■□□□ 1.56
LINC00535-201ENST00000501400 AMER1Q5JTC6 1135 aaPredicted RBP24.8■■□□□ 1.56
LINC00535-201ENST00000501400 PNISRQ8TF01 805 aaKnown RBP24.8■■□□□ 1.56
LINC00535-201ENST00000501400 NLRP13Q86W25 1043 aa24.78■■□□□ 1.56
LINC00535-201ENST00000501400 TMC1Q8TDI8 760 aa24.78■■□□□ 1.56
LINC00535-201ENST00000501400 LRPPRCP42704 1394 aaKnown RBP24.78■■□□□ 1.56
LINC00535-201ENST00000501400 KNSTRNQ9Y448 316 aa24.76■■□□□ 1.55
LINC00535-201ENST00000501400 NPC1L1Q9UHC9 1359 aa24.76■■□□□ 1.55
LINC00535-201ENST00000501400 NLRP1Q9C000 1473 aa24.76■■□□□ 1.55
LINC00535-201ENST00000501400 STK26Q9P289 416 aa24.75■■□□□ 1.55
LINC00535-201ENST00000501400 DLC1Q96QB1 1528 aa24.74■■□□□ 1.55
LINC00535-201ENST00000501400 CEBPAP49715 358 aaPredicted RBP24.73■■□□□ 1.55
LINC00535-201ENST00000501400 ZBED9Q6R2W3 1325 aa24.73■■□□□ 1.55
LINC00535-201ENST00000501400 TMEM2Q9UHN6 1383 aa24.73■■□□□ 1.55
LINC00535-201ENST00000501400 CARD14Q9BXL6 1004 aa24.72■■□□□ 1.55
LINC00535-201ENST00000501400 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.71■■□□□ 1.55
LINC00535-201ENST00000501400 EVC2Q86UK5 1308 aa24.7■■□□□ 1.55
LINC00535-201ENST00000501400 SAFB2Q14151 953 aaKnown RBP eCLIP24.69■■□□□ 1.54
LINC00535-201ENST00000501400 PUS7Q96PZ0 661 aaKnown RBP24.69■■□□□ 1.54
LINC00535-201ENST00000501400 USP32Q8NFA0 1604 aa24.69■■□□□ 1.54
LINC00535-201ENST00000501400 KNDC1Q76NI1 1749 aa24.69■■□□□ 1.54
LINC00535-201ENST00000501400 PRAM1Q96QH2 718 aa24.69■■□□□ 1.54
LINC00535-201ENST00000501400 METP08581 1390 aa24.66■■□□□ 1.54
LINC00535-201ENST00000501400 SLC12A5Q9H2X9 1139 aa24.66■■□□□ 1.54
LINC00535-201ENST00000501400 NSD3Q9BZ95 1437 aa24.65■■□□□ 1.54
LINC00535-201ENST00000501400 ABCC11Q96J66 1382 aa24.64■■□□□ 1.54
LINC00535-201ENST00000501400 PPP2R1AP30153 589 aa24.64■■□□□ 1.53
LINC00535-201ENST00000501400 SLIT1O75093 1534 aa24.63■■□□□ 1.53
LINC00535-201ENST00000501400 RIMS1Q86UR5 1692 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms