RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.56□□□□□ -1.04
CSTF1-207ENST00000498689 RTEL1-TNFRSF6BF6WH68 1400 aa8.55□□□□□ -1.04
CSTF1-207ENST00000498689 PRDM15P57071 1507 aaPredicted RBP8.55□□□□□ -1.04
CSTF1-207ENST00000498689 PREX2Q70Z35 1606 aa8.55□□□□□ -1.04
CSTF1-207ENST00000498689 R3HDM1Q15032 1099 aaKnown RBP8.55□□□□□ -1.04
CSTF1-207ENST00000498689 PZPP20742 1482 aa8.55□□□□□ -1.04
CSTF1-207ENST00000498689 NLRP1Q9C000 1473 aa8.55□□□□□ -1.04
CSTF1-207ENST00000498689 CDC42BPAQ5VT25 1732 aa8.54□□□□□ -1.04
CSTF1-207ENST00000498689 LTKP29376 864 aa8.54□□□□□ -1.04
CSTF1-207ENST00000498689 FAM9AQ8IZU1 332 aaPredicted RBP8.54□□□□□ -1.04
CSTF1-207ENST00000498689 PIP4P2Q8N4L2 257 aa8.54□□□□□ -1.04
CSTF1-207ENST00000498689 MARF1Q9Y4F3 1742 aaKnown RBP8.54□□□□□ -1.04
CSTF1-207ENST00000498689 UNC13BO14795 1591 aa8.53□□□□□ -1.04
CSTF1-207ENST00000498689 INO80Q9ULG1 1556 aaPredicted RBP8.53□□□□□ -1.04
CSTF1-207ENST00000498689 CHD2O14647 1828 aaKnown RBP8.53□□□□□ -1.04
CSTF1-207ENST00000498689 PROSER2Q86WR7 435 aaPredicted RBP8.53□□□□□ -1.04
CSTF1-207ENST00000498689 LRRIQ1Q96JM4 1722 aa8.53□□□□□ -1.04
CSTF1-207ENST00000498689 MIA2Q96PC5 1412 aa8.53□□□□□ -1.04
CSTF1-207ENST00000498689 SPHKAPQ2M3C7 1700 aa8.52□□□□□ -1.05
CSTF1-207ENST00000498689 PITPNM1O00562 1244 aa8.52□□□□□ -1.05
CSTF1-207ENST00000498689 ATRNO75882 1429 aa8.52□□□□□ -1.05
CSTF1-207ENST00000498689 A2MP01023 1474 aa8.51□□□□□ -1.05
CSTF1-207ENST00000498689 MSH6P52701 1360 aa8.51□□□□□ -1.05
CSTF1-207ENST00000498689 SP7Q8TDD2 431 aaPredicted RBP8.51□□□□□ -1.05
CSTF1-207ENST00000498689 NCOA2Q15596 1464 aa8.51□□□□□ -1.05
CSTF1-207ENST00000498689 ADAMTS2O95450 1211 aa8.5□□□□□ -1.05
CSTF1-207ENST00000498689 ABCC3O15438 1527 aa8.49□□□□□ -1.05
CSTF1-207ENST00000498689 GLI3P10071 1580 aa8.49□□□□□ -1.05
CSTF1-207ENST00000498689 USP21Q9UK80 565 aa8.49□□□□□ -1.05
CSTF1-207ENST00000498689 RGPD1P0DJD0 1748 aa8.49□□□□□ -1.05
CSTF1-207ENST00000498689 TNS1Q9HBL0 1735 aaKnown RBP8.49□□□□□ -1.05
CSTF1-207ENST00000498689 TRPC5Q9UL62 973 aaPredicted RBP8.48□□□□□ -1.05
CSTF1-207ENST00000498689 ARHGAP23Q9P227 1491 aa8.48□□□□□ -1.05
CSTF1-207ENST00000498689 HAX1O00165 279 aa8.47□□□□□ -1.05
CSTF1-207ENST00000498689 GIGYF1O75420 1035 aaPredicted RBP8.47□□□□□ -1.05
CSTF1-207ENST00000498689 ATXN8OSP0DMR3 200 aa8.47□□□□□ -1.05
CSTF1-207ENST00000498689 KCNA6P17658 529 aa8.47□□□□□ -1.05
CSTF1-207ENST00000498689 PRELPP51888 382 aa8.47□□□□□ -1.05
CSTF1-207ENST00000498689 COL13A1Q5TAT6 717 aaPredicted RBP8.47□□□□□ -1.05
CSTF1-207ENST00000498689 SLIT1O75093 1534 aa8.47□□□□□ -1.05
CSTF1-207ENST00000498689 SYCP2Q9BX26 1530 aa8.47□□□□□ -1.05
CSTF1-207ENST00000498689 TET3O43151 1660 aa8.46□□□□□ -1.05
CSTF1-207ENST00000498689 SHANK3Q9BYB0 1731 aa8.46□□□□□ -1.05
CSTF1-207ENST00000498689 NKTRP30414 1462 aaKnown RBP8.46□□□□□ -1.05
CSTF1-207ENST00000498689 SF3B2Q13435 895 aaKnown RBP8.46□□□□□ -1.06
CSTF1-207ENST00000498689 PNPLA6Q8IY17 1366 aa8.46□□□□□ -1.06
CSTF1-207ENST00000498689 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.46□□□□□ -1.06
CSTF1-207ENST00000498689 SETD5Q9C0A6 1442 aa8.46□□□□□ -1.06
CSTF1-207ENST00000498689 TXNDC2Q86VQ3 553 aa8.45□□□□□ -1.06
CSTF1-207ENST00000498689 CAMSAP2Q08AD1 1489 aa8.45□□□□□ -1.06
CSTF1-207ENST00000498689 NUP188Q5SRE5 1749 aa8.44□□□□□ -1.06
CSTF1-207ENST00000498689 EN1Q05925 392 aaPredicted RBP8.44□□□□□ -1.06
CSTF1-207ENST00000498689 SPAG9O60271 1321 aaKnown RBP8.44□□□□□ -1.06
CSTF1-207ENST00000498689 ASXL1Q8IXJ9 1541 aa8.44□□□□□ -1.06
CSTF1-207ENST00000498689 GPATCH8Q9UKJ3 1502 aaKnown RBP8.44□□□□□ -1.06
CSTF1-207ENST00000498689 MYOM1P52179 1685 aa8.43□□□□□ -1.06
CSTF1-207ENST00000498689 FXR2P51116 673 aaKnown RBP eCLIP8.43□□□□□ -1.06
CSTF1-207ENST00000498689 BRINP3Q76B58 766 aa8.43□□□□□ -1.06
CSTF1-207ENST00000498689 DDX17Q92841 729 aaKnown RBP8.43□□□□□ -1.06
CSTF1-207ENST00000498689 SLC26A8Q96RN1 970 aa8.43□□□□□ -1.06
CSTF1-207ENST00000498689 PIK3C2BO00750 1634 aa8.43□□□□□ -1.06
CSTF1-207ENST00000498689 MROH1Q8NDA8 1641 aa8.43□□□□□ -1.06
CSTF1-207ENST00000498689 RANGAP1P46060 587 aaPredicted RBP8.42□□□□□ -1.06
CSTF1-207ENST00000498689 NINLQ9Y2I6 1382 aa8.42□□□□□ -1.06
CSTF1-207ENST00000498689 RREB1Q92766 1687 aa8.42□□□□□ -1.06
CSTF1-207ENST00000498689 CEP152O94986 1710 aa8.42□□□□□ -1.06
CSTF1-207ENST00000498689 FNBP4Q8N3X1 1017 aaPredicted RBP8.41□□□□□ -1.06
CSTF1-207ENST00000498689 NRKQ7Z2Y5 1582 aa8.4□□□□□ -1.06
CSTF1-207ENST00000498689 SPDYE2BA6NHP3 402 aa8.4□□□□□ -1.06
CSTF1-207ENST00000498689 SPDYE6P0CI01 402 aa8.4□□□□□ -1.06
CSTF1-207ENST00000498689 BAG6P46379 1132 aa8.4□□□□□ -1.06
CSTF1-207ENST00000498689 SPDYE2Q495Y8 402 aa8.4□□□□□ -1.06
CSTF1-207ENST00000498689 PPP1R1BQ9UD71 204 aaPredicted RBP8.4□□□□□ -1.06
CSTF1-207ENST00000498689 MYO5BQ9ULV0 1848 aa8.4□□□□□ -1.07
CSTF1-207ENST00000498689 PRXQ9BXM0 1461 aa8.39□□□□□ -1.07
CSTF1-207ENST00000498689 HNRNPMP52272 730 aaKnown RBP eCLIP8.39□□□□□ -1.07
CSTF1-207ENST00000498689 GJD4Q96KN9 370 aaPredicted RBP8.39□□□□□ -1.07
CSTF1-207ENST00000498689 ERVK-7P63135 1459 aa8.38□□□□□ -1.07
CSTF1-207ENST00000498689 RALGAPBQ86X10 1494 aa8.38□□□□□ -1.07
CSTF1-207ENST00000498689 CLEC11AQ9Y240 323 aa8.38□□□□□ -1.07
CSTF1-207ENST00000498689 TROQ12816 1431 aaPredicted RBP8.37□□□□□ -1.07
CSTF1-207ENST00000498689 COL22A1Q8NFW1 1626 aaPredicted RBP8.37□□□□□ -1.07
CSTF1-207ENST00000498689 LRRC59Q96AG4 307 aaKnown RBP8.37□□□□□ -1.07
CSTF1-207ENST00000498689 WASHC2CQ9Y4E1 1318 aa8.36□□□□□ -1.07
CSTF1-207ENST00000498689 EZH2Q15910 746 aaKnown RBP8.36□□□□□ -1.07
CSTF1-207ENST00000498689 TNS4Q8IZW8 715 aa8.36□□□□□ -1.07
CSTF1-207ENST00000498689 CASZ1Q86V15 1759 aa8.35□□□□□ -1.07
CSTF1-207ENST00000498689 TNRC18O15417 2968 aaPredicted RBP8.35□□□□□ -1.07
CSTF1-207ENST00000498689 HSPA6P17066 643 aa8.35□□□□□ -1.07
CSTF1-207ENST00000498689 MKRN4PQ13434 485 aaPredicted RBP8.35□□□□□ -1.07
CSTF1-207ENST00000498689 ZNF777Q9ULD5 760 aaPredicted RBP8.35□□□□□ -1.07
CSTF1-207ENST00000498689 ARHGAP35Q9NRY4 1499 aa8.34□□□□□ -1.07
CSTF1-207ENST00000498689 KIF3BO15066 747 aa8.34□□□□□ -1.07
CSTF1-207ENST00000498689 EID1Q9Y6B2 187 aa8.34□□□□□ -1.07
CSTF1-207ENST00000498689 SUPT5HO00267 1087 aaKnown RBP8.33□□□□□ -1.08
CSTF1-207ENST00000498689 PTCH1Q13635 1447 aa8.33□□□□□ -1.08
CSTF1-207ENST00000498689 C14orf37Q86TY3 774 aa8.33□□□□□ -1.08
CSTF1-207ENST00000498689 SEPT12Q8IYM1 358 aa8.33□□□□□ -1.08
CSTF1-207ENST00000498689 ZNF692Q9BU19 519 aaPredicted RBP8.33□□□□□ -1.08
CSTF1-207ENST00000498689 SPON1Q9HCB6 807 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms