RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 ADGRB3O60242 1522 aa9.18□□□□□ -0.94
CSNK1E-214ENST00000498529 EFCAB6Q5THR3 1501 aa9.18□□□□□ -0.94
CSNK1E-214ENST00000498529 GCC2Q8IWJ2 1684 aa9.18□□□□□ -0.94
CSNK1E-214ENST00000498529 PHLPP1O60346 1717 aa9.17□□□□□ -0.94
CSNK1E-214ENST00000498529 SHPRHQ149N8 1683 aa9.17□□□□□ -0.94
CSNK1E-214ENST00000498529 NKTRP30414 1462 aaKnown RBP9.17□□□□□ -0.94
CSNK1E-214ENST00000498529 KIF3BO15066 747 aa9.17□□□□□ -0.94
CSNK1E-214ENST00000498529 FAM135BQ49AJ0 1406 aa9.16□□□□□ -0.94
CSNK1E-214ENST00000498529 ERBINQ96RT1 1412 aa9.16□□□□□ -0.94
CSNK1E-214ENST00000498529 HAX1O00165 279 aa9.16□□□□□ -0.94
CSNK1E-214ENST00000498529 PIP4K2BP78356 416 aa9.16□□□□□ -0.94
CSNK1E-214ENST00000498529 ANKLE2Q86XL3 938 aa9.16□□□□□ -0.94
CSNK1E-214ENST00000498529 PTPN23Q9H3S7 1636 aa9.16□□□□□ -0.94
CSNK1E-214ENST00000498529 THEMISQ8N1K5 641 aaPredicted RBP9.15□□□□□ -0.94
CSNK1E-214ENST00000498529 MYOM3Q5VTT5 1437 aa9.14□□□□□ -0.95
CSNK1E-214ENST00000498529 WASHC2CQ9Y4E1 1318 aa9.14□□□□□ -0.95
CSNK1E-214ENST00000498529 DIP2AQ14689 1571 aa9.14□□□□□ -0.95
CSNK1E-214ENST00000498529 NOS1P29475 1434 aa9.14□□□□□ -0.95
CSNK1E-214ENST00000498529 VPS8Q8N3P4 1428 aa9.14□□□□□ -0.95
CSNK1E-214ENST00000498529 TMEM131LA2VDJ0 1609 aa9.13□□□□□ -0.95
CSNK1E-214ENST00000498529 AHDC1Q5TGY3 1603 aaPredicted RBP9.13□□□□□ -0.95
CSNK1E-214ENST00000498529 RSPH4AQ5TD94 716 aa9.13□□□□□ -0.95
CSNK1E-214ENST00000498529 LTKP29376 864 aa9.12□□□□□ -0.95
CSNK1E-214ENST00000498529 ABCC5O15440 1437 aa9.12□□□□□ -0.95
CSNK1E-214ENST00000498529 ZFYVE9O95405 1425 aa9.12□□□□□ -0.95
CSNK1E-214ENST00000498529 LRP6O75581 1613 aa9.12□□□□□ -0.95
CSNK1E-214ENST00000498529 UNC13BO14795 1591 aa9.12□□□□□ -0.95
CSNK1E-214ENST00000498529 TMEM2Q9UHN6 1383 aa9.12□□□□□ -0.95
CSNK1E-214ENST00000498529 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.11□□□□□ -0.95
CSNK1E-214ENST00000498529 NHSL1Q5SYE7 1610 aa9.11□□□□□ -0.95
CSNK1E-214ENST00000498529 NRXN3Q9Y4C0 1643 aa9.11□□□□□ -0.95
CSNK1E-214ENST00000498529 XRN1Q8IZH2 1706 aaKnown RBP9.11□□□□□ -0.95
CSNK1E-214ENST00000498529 ADGRL2O95490 1459 aa9.1□□□□□ -0.95
CSNK1E-214ENST00000498529 E9PCH4 1651 aa9.1□□□□□ -0.95
CSNK1E-214ENST00000498529 TMEM94Q12767 1356 aa9.09□□□□□ -0.95
CSNK1E-214ENST00000498529 LAMC1P11047 1609 aa9.09□□□□□ -0.95
CSNK1E-214ENST00000498529 DAPK1P53355 1430 aa9.08□□□□□ -0.96
CSNK1E-214ENST00000498529 POTEAQ6S8J7 498 aa9.08□□□□□ -0.96
CSNK1E-214ENST00000498529 KIF15Q9NS87 1388 aa9.08□□□□□ -0.96
CSNK1E-214ENST00000498529 RPRD2Q5VT52 1461 aaKnown RBP9.08□□□□□ -0.96
CSNK1E-214ENST00000498529 PLSCR2Q9NRY7 297 aa9.07□□□□□ -0.96
CSNK1E-214ENST00000498529 IQGAP3Q86VI3 1631 aa9.06□□□□□ -0.96
CSNK1E-214ENST00000498529 AMER1Q5JTC6 1135 aaPredicted RBP9.06□□□□□ -0.96
CSNK1E-214ENST00000498529 RTN4Q9NQC3 1192 aaKnown RBP9.06□□□□□ -0.96
CSNK1E-214ENST00000498529 PIP4P2Q8N4L2 257 aa9.05□□□□□ -0.96
CSNK1E-214ENST00000498529 NALCNQ8IZF0 1738 aa9.05□□□□□ -0.96
CSNK1E-214ENST00000498529 FGD6Q6ZV73 1430 aa9.05□□□□□ -0.96
CSNK1E-214ENST00000498529 ADAMTS13Q76LX8 1427 aa9.04□□□□□ -0.96
CSNK1E-214ENST00000498529 CDK12Q9NYV4 1490 aaPredicted RBP9.03□□□□□ -0.96
CSNK1E-214ENST00000498529 KANK4Q5T7N3 995 aaPredicted RBP9.03□□□□□ -0.96
CSNK1E-214ENST00000498529 SPHKAPQ2M3C7 1700 aa9.02□□□□□ -0.96
CSNK1E-214ENST00000498529 PLEKHG1Q9ULL1 1385 aa9.02□□□□□ -0.97
CSNK1E-214ENST00000498529 TSPY4P0CV99 314 aa9.02□□□□□ -0.97
CSNK1E-214ENST00000498529 TSPY10P0CW01 314 aa9.02□□□□□ -0.97
CSNK1E-214ENST00000498529 KCNA6P17658 529 aa9.02□□□□□ -0.97
CSNK1E-214ENST00000498529 TXNDC2Q86VQ3 553 aa9.02□□□□□ -0.97
CSNK1E-214ENST00000498529 NCOA3Q9Y6Q9 1424 aa9.02□□□□□ -0.97
CSNK1E-214ENST00000498529 SETBP1Q9Y6X0 1596 aa9.02□□□□□ -0.97
CSNK1E-214ENST00000498529 JCADQ9P266 1359 aa9.01□□□□□ -0.97
CSNK1E-214ENST00000498529 AKT1S1Q96B36 256 aa9.01□□□□□ -0.97
CSNK1E-214ENST00000498529 SRCAPQ6ZRS2 3230 aa9.01□□□□□ -0.97
CSNK1E-214ENST00000498529 TRPM2O94759 1503 aa9□□□□□ -0.97
CSNK1E-214ENST00000498529 MARF1Q9Y4F3 1742 aaKnown RBP9□□□□□ -0.97
CSNK1E-214ENST00000498529 MKRN4PQ13434 485 aaPredicted RBP9□□□□□ -0.97
CSNK1E-214ENST00000498529 IDI1Q13907 227 aa9□□□□□ -0.97
CSNK1E-214ENST00000498529 PROM2Q8N271 834 aa9□□□□□ -0.97
CSNK1E-214ENST00000498529 EP400Q96L91 3159 aa9□□□□□ -0.97
CSNK1E-214ENST00000498529 ASXL1Q8IXJ9 1541 aa9□□□□□ -0.97
CSNK1E-214ENST00000498529 COL22A1Q8NFW1 1626 aaPredicted RBP8.98□□□□□ -0.97
CSNK1E-214ENST00000498529 DCCP43146 1447 aa8.98□□□□□ -0.97
CSNK1E-214ENST00000498529 PTPRUQ92729 1446 aa8.98□□□□□ -0.97
CSNK1E-214ENST00000498529 MSH6P52701 1360 aa8.98□□□□□ -0.97
CSNK1E-214ENST00000498529 RIMS2Q9UQ26 1411 aa8.97□□□□□ -0.97
CSNK1E-214ENST00000498529 PIK3R4Q99570 1358 aa8.97□□□□□ -0.97
CSNK1E-214ENST00000498529 EID1Q9Y6B2 187 aa8.96□□□□□ -0.98
CSNK1E-214ENST00000498529 RGS12O14924 1447 aa8.96□□□□□ -0.98
CSNK1E-214ENST00000498529 MST1RQ04912 1400 aa8.96□□□□□ -0.98
CSNK1E-214ENST00000498529 PRAG1Q86YV5 1406 aa8.96□□□□□ -0.98
CSNK1E-214ENST00000498529 SETD5Q9C0A6 1442 aa8.96□□□□□ -0.98
CSNK1E-214ENST00000498529 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.95□□□□□ -0.98
CSNK1E-214ENST00000498529 RBM33Q96EV2 1170 aaKnown RBP8.95□□□□□ -0.98
CSNK1E-214ENST00000498529 SLC26A8Q96RN1 970 aa8.95□□□□□ -0.98
CSNK1E-214ENST00000498529 SPATA31A6Q5VVP1 1343 aa8.95□□□□□ -0.98
CSNK1E-214ENST00000498529 KANK1Q14678 1352 aa8.95□□□□□ -0.98
CSNK1E-214ENST00000498529 ANKRD30AQ9BXX3 1397 aa8.95□□□□□ -0.98
CSNK1E-214ENST00000498529 NEXMIFQ5QGS0 1516 aa8.95□□□□□ -0.98
CSNK1E-214ENST00000498529 CLTCL1P53675 1640 aa8.94□□□□□ -0.98
CSNK1E-214ENST00000498529 ANKRD50Q9ULJ7 1429 aa8.94□□□□□ -0.98
CSNK1E-214ENST00000498529 LHX8Q68G74 356 aa8.93□□□□□ -0.98
CSNK1E-214ENST00000498529 UPF1Q92900 1129 aaKnown RBP eCLIP8.93□□□□□ -0.98
CSNK1E-214ENST00000498529 RRP7BPQ9NSQ0 103 aa8.93□□□□□ -0.98
CSNK1E-214ENST00000498529 SLAIN2Q9P270 581 aa8.93□□□□□ -0.98
CSNK1E-214ENST00000498529 KIF1BO60333 1816 aa8.92□□□□□ -0.98
CSNK1E-214ENST00000498529 PPLO60437 1756 aa8.92□□□□□ -0.98
CSNK1E-214ENST00000498529 PROSER2Q86WR7 435 aaPredicted RBP8.92□□□□□ -0.98
CSNK1E-214ENST00000498529 SLC52A1Q9NWF4 448 aa8.92□□□□□ -0.98
CSNK1E-214ENST00000498529 IFT172Q9UG01 1749 aa8.91□□□□□ -0.98
CSNK1E-214ENST00000498529 TBX22Q9Y458 520 aa8.91□□□□□ -0.98
CSNK1E-214ENST00000498529 BRWD3Q6RI45 1802 aa8.91□□□□□ -0.98
CSNK1E-214ENST00000498529 ABCA3Q99758 1704 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms