RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 GCC2Q8IWJ2 1684 aa14.88□□□□□ -0.03
TSPAN1-209ENST00000498443 IDI1Q13907 227 aa14.88□□□□□ -0.03
TSPAN1-209ENST00000498443 STAG3Q9UJ98 1225 aa14.88□□□□□ -0.03
TSPAN1-209ENST00000498443 PROSER2Q86WR7 435 aaPredicted RBP14.87□□□□□ -0.03
TSPAN1-209ENST00000498443 LMTK2Q8IWU2 1503 aa14.87□□□□□ -0.03
TSPAN1-209ENST00000498443 MEX3CQ5U5Q3 659 aaKnown RBP14.86□□□□□ -0.03
TSPAN1-209ENST00000498443 BCANQ96GW7 911 aa14.85□□□□□ -0.03
TSPAN1-209ENST00000498443 PHLPP1O60346 1717 aa14.85□□□□□ -0.03
TSPAN1-209ENST00000498443 EFCAB6Q5THR3 1501 aa14.85□□□□□ -0.03
TSPAN1-209ENST00000498443 RAB3GAP2Q9H2M9 1393 aa14.85□□□□□ -0.03
TSPAN1-209ENST00000498443 ARHGAP31Q2M1Z3 1444 aa14.84□□□□□ -0.03
TSPAN1-209ENST00000498443 SETD5Q9C0A6 1442 aa14.84□□□□□ -0.03
TSPAN1-209ENST00000498443 E9PCH4 1651 aa14.84□□□□□ -0.03
TSPAN1-209ENST00000498443 UPF1Q92900 1129 aaKnown RBP eCLIP14.84□□□□□ -0.03
TSPAN1-209ENST00000498443 SLC26A8Q96RN1 970 aa14.84□□□□□ -0.03
TSPAN1-209ENST00000498443 IQGAP3Q86VI3 1631 aa14.84□□□□□ -0.03
TSPAN1-209ENST00000498443 NOS1P29475 1434 aa14.83□□□□□ -0.04
TSPAN1-209ENST00000498443 TET3O43151 1660 aa14.82□□□□□ -0.04
TSPAN1-209ENST00000498443 NUTM2DQ5VT03 806 aaPredicted RBP14.82□□□□□ -0.04
TSPAN1-209ENST00000498443 SLC4A1APQ9BWU0 796 aaKnown RBP14.82□□□□□ -0.04
TSPAN1-209ENST00000498443 SLIT1O75093 1534 aa14.82□□□□□ -0.04
TSPAN1-209ENST00000498443 MPHOSPH9Q99550 1183 aa14.81□□□□□ -0.04
TSPAN1-209ENST00000498443 JCADQ9P266 1359 aa14.81□□□□□ -0.04
TSPAN1-209ENST00000498443 ARHGAP23Q9P227 1491 aa14.81□□□□□ -0.04
TSPAN1-209ENST00000498443 PIK3C2BO00750 1634 aa14.81□□□□□ -0.04
TSPAN1-209ENST00000498443 CHGAP10645 457 aaKnown RBP14.8□□□□□ -0.04
TSPAN1-209ENST00000498443 KCNA6P17658 529 aa14.79□□□□□ -0.04
TSPAN1-209ENST00000498443 MSH6P52701 1360 aa14.79□□□□□ -0.04
TSPAN1-209ENST00000498443 TMEM2Q9UHN6 1383 aa14.78□□□□□ -0.04
TSPAN1-209ENST00000498443 SLAIN2Q9P270 581 aa14.77□□□□□ -0.05
TSPAN1-209ENST00000498443 LRP6O75581 1613 aa14.77□□□□□ -0.05
TSPAN1-209ENST00000498443 ZNF772Q68DY9 489 aaPredicted RBP14.76□□□□□ -0.05
TSPAN1-209ENST00000498443 C14orf37Q86TY3 774 aa14.76□□□□□ -0.05
TSPAN1-209ENST00000498443 CLSPNQ9HAW4 1339 aa14.75□□□□□ -0.05
TSPAN1-209ENST00000498443 NUTM2BA6NNL0 878 aaPredicted RBP14.75□□□□□ -0.05
TSPAN1-209ENST00000498443 NUTM2EB1AL46 878 aaPredicted RBP14.75□□□□□ -0.05
TSPAN1-209ENST00000498443 NUTM2AQ8IVF1 878 aaPredicted RBP14.75□□□□□ -0.05
TSPAN1-209ENST00000498443 RXRBP28702 533 aa14.74□□□□□ -0.05
TSPAN1-209ENST00000498443 MYO5BQ9ULV0 1848 aa14.73□□□□□ -0.05
TSPAN1-209ENST00000498443 RPRD2Q5VT52 1461 aaKnown RBP14.73□□□□□ -0.05
TSPAN1-209ENST00000498443 COL16A1Q07092 1604 aaPredicted RBP14.73□□□□□ -0.05
TSPAN1-209ENST00000498443 SLC52A1Q9NWF4 448 aa14.72□□□□□ -0.05
TSPAN1-209ENST00000498443 NKTRP30414 1462 aaKnown RBP14.7□□□□□ -0.06
TSPAN1-209ENST00000498443 SPATA31A6Q5VVP1 1343 aa14.7□□□□□ -0.06
TSPAN1-209ENST00000498443 CLTCL1P53675 1640 aa14.7□□□□□ -0.06
TSPAN1-209ENST00000498443 TMEM131LA2VDJ0 1609 aa14.69□□□□□ -0.06
TSPAN1-209ENST00000498443 SPHKAPQ2M3C7 1700 aa14.69□□□□□ -0.06
TSPAN1-209ENST00000498443 NWD1Q149M9 1564 aa14.68□□□□□ -0.06
TSPAN1-209ENST00000498443 PPP1R15AO75807 674 aaPredicted RBP14.68□□□□□ -0.06
TSPAN1-209ENST00000498443 ADGRB3O60242 1522 aa14.67□□□□□ -0.06
TSPAN1-209ENST00000498443 RGL3Q3MIN7 710 aa14.67□□□□□ -0.06
TSPAN1-209ENST00000498443 KDM5AP29375 1690 aaKnown RBP14.67□□□□□ -0.06
TSPAN1-209ENST00000498443 ZNF326Q5BKZ1 582 aaKnown RBP14.66□□□□□ -0.06
TSPAN1-209ENST00000498443 RIMS2Q9UQ26 1411 aa14.66□□□□□ -0.06
TSPAN1-209ENST00000498443 AFF2P51816 1311 aa14.66□□□□□ -0.06
TSPAN1-209ENST00000498443 TRPM2O94759 1503 aa14.65□□□□□ -0.06
TSPAN1-209ENST00000498443 SHPRHQ149N8 1683 aa14.65□□□□□ -0.06
TSPAN1-209ENST00000498443 ATF3P18847 181 aa14.64□□□□□ -0.07
TSPAN1-209ENST00000498443 ZFYVE9O95405 1425 aa14.64□□□□□ -0.07
TSPAN1-209ENST00000498443 CHD2O14647 1828 aaKnown RBP14.62□□□□□ -0.07
TSPAN1-209ENST00000498443 ZNF316A6NFI3 1004 aaPredicted RBP14.62□□□□□ -0.07
TSPAN1-209ENST00000498443 C8orf37Q96NL8 207 aa14.62□□□□□ -0.07
TSPAN1-209ENST00000498443 ANKRD30BQ9BXX2 1392 aa14.61□□□□□ -0.07
TSPAN1-209ENST00000498443 RGS12O14924 1447 aa14.61□□□□□ -0.07
TSPAN1-209ENST00000498443 SIN3AQ96ST3 1273 aa14.61□□□□□ -0.07
TSPAN1-209ENST00000498443 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.61□□□□□ -0.07
TSPAN1-209ENST00000498443 AHDC1Q5TGY3 1603 aaPredicted RBP14.6□□□□□ -0.07
TSPAN1-209ENST00000498443 SRCAPQ6ZRS2 3230 aa14.6□□□□□ -0.07
TSPAN1-209ENST00000498443 DIEXFQ68CQ4 756 aaKnown RBP14.6□□□□□ -0.07
TSPAN1-209ENST00000498443 CADPS2Q86UW7 1296 aa14.6□□□□□ -0.07
TSPAN1-209ENST00000498443 CDK12Q9NYV4 1490 aaPredicted RBP14.59□□□□□ -0.07
TSPAN1-209ENST00000498443 QTRT2Q9H974 415 aaKnown RBP14.59□□□□□ -0.07
TSPAN1-209ENST00000498443 ADGRF5Q8IZF2 1346 aa14.58□□□□□ -0.08
TSPAN1-209ENST00000498443 PLEKHG1Q9ULL1 1385 aa14.58□□□□□ -0.08
TSPAN1-209ENST00000498443 CCDC144AA2RUR9 1427 aa14.58□□□□□ -0.08
TSPAN1-209ENST00000498443 BRINP3Q76B58 766 aa14.57□□□□□ -0.08
TSPAN1-209ENST00000498443 C19orf44Q9H6X5 657 aa14.57□□□□□ -0.08
TSPAN1-209ENST00000498443 SPATA31E1Q6ZUB1 1445 aa14.57□□□□□ -0.08
TSPAN1-209ENST00000498443 NEXMIFQ5QGS0 1516 aa14.56□□□□□ -0.08
TSPAN1-209ENST00000498443 RBM6P78332 1123 aaKnown RBP14.56□□□□□ -0.08
TSPAN1-209ENST00000498443 DHX57Q6P158 1386 aaKnown RBP14.56□□□□□ -0.08
TSPAN1-209ENST00000498443 ADAMTS13Q76LX8 1427 aa14.56□□□□□ -0.08
TSPAN1-209ENST00000498443 DIP2AQ14689 1571 aa14.56□□□□□ -0.08
TSPAN1-209ENST00000498443 KIF1BO60333 1816 aa14.55□□□□□ -0.08
TSPAN1-209ENST00000498443 ADAMTS2O95450 1211 aa14.55□□□□□ -0.08
TSPAN1-209ENST00000498443 HDGFP51858 240 aaKnown RBP14.55□□□□□ -0.08
TSPAN1-209ENST00000498443 ZRANB1Q9UGI0 708 aa14.55□□□□□ -0.08
TSPAN1-209ENST00000498443 KDM2AQ9Y2K7 1162 aa14.55□□□□□ -0.08
TSPAN1-209ENST00000498443 NEUROD1Q13562 356 aa14.54□□□□□ -0.08
TSPAN1-209ENST00000498443 DDX17Q92841 729 aaKnown RBP14.54□□□□□ -0.08
TSPAN1-209ENST00000498443 PTPRUQ92729 1446 aa14.53□□□□□ -0.08
TSPAN1-209ENST00000498443 CENPBP07199 599 aaPredicted RBP14.53□□□□□ -0.08
TSPAN1-209ENST00000498443 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.53□□□□□ -0.08
TSPAN1-209ENST00000498443 NGLY1Q96IV0 654 aa14.53□□□□□ -0.08
TSPAN1-209ENST00000498443 TBX22Q9Y458 520 aa14.53□□□□□ -0.08
TSPAN1-209ENST00000498443 METP08581 1390 aa14.52□□□□□ -0.08
TSPAN1-209ENST00000498443 ATAD2Q6PL18 1390 aa14.52□□□□□ -0.08
TSPAN1-209ENST00000498443 NRXN3Q9Y4C0 1643 aa14.52□□□□□ -0.09
TSPAN1-209ENST00000498443 SETBP1Q9Y6X0 1596 aa14.51□□□□□ -0.09
TSPAN1-209ENST00000498443 ASXL1Q8IXJ9 1541 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms