RNA–Protein interactions for RNA: ENST00000498300.5

CCSER2-209, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 3

Gene CCSER2, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-209ENST00000498300 ZNF335Q9H4Z2 1342 aaPredicted RBP12.13□□□□□ -0.47
CCSER2-209ENST00000498300 NUBP1P53384 320 aa12.13□□□□□ -0.47
CCSER2-209ENST00000498300 CFDP1Q9UEE9 299 aaPredicted RBP12.13□□□□□ -0.47
CCSER2-209ENST00000498300 A2MP01023 1474 aa12.13□□□□□ -0.47
CCSER2-209ENST00000498300 PTPRKQ15262 1439 aa12.12□□□□□ -0.47
CCSER2-209ENST00000498300 MYO3AQ8NEV4 1616 aa12.12□□□□□ -0.47
CCSER2-209ENST00000498300 SNPHO15079 494 aa12.12□□□□□ -0.47
CCSER2-209ENST00000498300 ZNF142P52746 1687 aaPredicted RBP12.11□□□□□ -0.47
CCSER2-209ENST00000498300 PLEKHH2Q8IVE3 1493 aa12.11□□□□□ -0.47
CCSER2-209ENST00000498300 CCNB3Q8WWL7 1395 aa12.11□□□□□ -0.47
CCSER2-209ENST00000498300 GGT6Q6P531 493 aa12.11□□□□□ -0.47
CCSER2-209ENST00000498300 CEP170BQ9Y4F5 1589 aaPredicted RBP12.1□□□□□ -0.47
CCSER2-209ENST00000498300 PLA2R1Q13018 1463 aa12.1□□□□□ -0.47
CCSER2-209ENST00000498300 PKD2Q13563 968 aa12.1□□□□□ -0.47
CCSER2-209ENST00000498300 PLCD3Q8N3E9 789 aa12.1□□□□□ -0.47
CCSER2-209ENST00000498300 OCEL1Q9H607 264 aa12.1□□□□□ -0.47
CCSER2-209ENST00000498300 ZNF644Q9H582 1327 aaPredicted RBP12.1□□□□□ -0.47
CCSER2-209ENST00000498300 TCOF1Q13428 1488 aaKnown RBP12.09□□□□□ -0.47
CCSER2-209ENST00000498300 UBAP1LF5GYI3 381 aa12.09□□□□□ -0.47
CCSER2-209ENST00000498300 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.08□□□□□ -0.48
CCSER2-209ENST00000498300 MTUS2Q5JR59 1369 aa12.07□□□□□ -0.48
CCSER2-209ENST00000498300 ADGBQ8N7X0 1667 aa12.07□□□□□ -0.48
CCSER2-209ENST00000498300 MBD5Q9P267 1494 aa12.07□□□□□ -0.48
CCSER2-209ENST00000498300 TIAM1Q13009 1591 aa12.05□□□□□ -0.48
CCSER2-209ENST00000498300 DNMT1P26358 1616 aaKnown RBP12.04□□□□□ -0.48
CCSER2-209ENST00000498300 A2ML1A8K2U0 1454 aa12.04□□□□□ -0.48
CCSER2-209ENST00000498300 RTEL1-TNFRSF6BF6WH68 1400 aa12.03□□□□□ -0.48
CCSER2-209ENST00000498300 FBXO31Q5XUX0 539 aaPredicted RBP12.03□□□□□ -0.48
CCSER2-209ENST00000498300 DHX29Q7Z478 1369 aaKnown RBP12.03□□□□□ -0.48
CCSER2-209ENST00000498300 FAM212AQ96EL1 285 aa12.02□□□□□ -0.49
CCSER2-209ENST00000498300 EHBP1L1Q8N3D4 1523 aa12.01□□□□□ -0.49
CCSER2-209ENST00000498300 KIF3BO15066 747 aa12.01□□□□□ -0.49
CCSER2-209ENST00000498300 ZBTB47Q9UFB7 747 aaPredicted RBP12.01□□□□□ -0.49
CCSER2-209ENST00000498300 TNRQ92752 1358 aa12.01□□□□□ -0.49
CCSER2-209ENST00000498300 NEURL4Q96JN8 1562 aa12.01□□□□□ -0.49
CCSER2-209ENST00000498300 CEP162Q5TB80 1403 aa12□□□□□ -0.49
CCSER2-209ENST00000498300 HSPA1LP34931 641 aa11.99□□□□□ -0.49
CCSER2-209ENST00000498300 EMP3P54852 163 aa11.99□□□□□ -0.49
CCSER2-209ENST00000498300 KRTAP3-3Q9BYR6 98 aa11.99□□□□□ -0.49
CCSER2-209ENST00000498300 KRTAP3-2Q9BYR7 98 aa11.99□□□□□ -0.49
CCSER2-209ENST00000498300 PZPP20742 1482 aa11.99□□□□□ -0.49
CCSER2-209ENST00000498300 POLR1AO95602 1720 aaPredicted RBP11.99□□□□□ -0.49
CCSER2-209ENST00000498300 KDM5DQ9BY66 1539 aa11.98□□□□□ -0.49
CCSER2-209ENST00000498300 SHANK2Q9UPX8 1470 aa11.98□□□□□ -0.49
CCSER2-209ENST00000498300 POTEB3A0JP26 581 aa11.98□□□□□ -0.49
CCSER2-209ENST00000498300 PIP4K2BP78356 416 aa11.98□□□□□ -0.49
CCSER2-209ENST00000498300 POTEBQ6S5H4 581 aa11.98□□□□□ -0.49
CCSER2-209ENST00000498300 CPS1P31327 1500 aa11.97□□□□□ -0.49
CCSER2-209ENST00000498300 CCDC141Q6ZP82 1450 aa11.97□□□□□ -0.49
CCSER2-209ENST00000498300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.97□□□□□ -0.49
CCSER2-209ENST00000498300 WASHC2CQ9Y4E1 1318 aa11.97□□□□□ -0.49
CCSER2-209ENST00000498300 CAMSAP2Q08AD1 1489 aa11.96□□□□□ -0.49
CCSER2-209ENST00000498300 NCOA2Q15596 1464 aa11.96□□□□□ -0.49
CCSER2-209ENST00000498300 TOM1O60784 492 aa11.96□□□□□ -0.49
CCSER2-209ENST00000498300 FAM135AQ9P2D6 1515 aa11.96□□□□□ -0.5
CCSER2-209ENST00000498300 MIA2Q96PC5 1412 aa11.95□□□□□ -0.5
CCSER2-209ENST00000498300 RSPH4AQ5TD94 716 aa11.95□□□□□ -0.5
CCSER2-209ENST00000498300 ANKLE2Q86XL3 938 aa11.95□□□□□ -0.5
CCSER2-209ENST00000498300 HS3ST6Q96QI5 342 aa11.95□□□□□ -0.5
CCSER2-209ENST00000498300 MED1Q15648 1581 aaPredicted RBP11.95□□□□□ -0.5
CCSER2-209ENST00000498300 VWDEQ8N2E2 1590 aa11.95□□□□□ -0.5
CCSER2-209ENST00000498300 THEMISQ8N1K5 641 aaPredicted RBP11.94□□□□□ -0.5
CCSER2-209ENST00000498300 UGGT1Q9NYU2 1555 aa11.93□□□□□ -0.5
CCSER2-209ENST00000498300 MED14O60244 1454 aa11.93□□□□□ -0.5
CCSER2-209ENST00000498300 NLRP1Q9C000 1473 aa11.93□□□□□ -0.5
CCSER2-209ENST00000498300 NPHP4O75161 1426 aaPredicted RBP11.93□□□□□ -0.5
CCSER2-209ENST00000498300 ALKQ9UM73 1620 aa11.93□□□□□ -0.5
CCSER2-209ENST00000498300 FAM205CA6NFA0 338 aa11.92□□□□□ -0.5
CCSER2-209ENST00000498300 DEPDC5O75140 1603 aa11.92□□□□□ -0.5
CCSER2-209ENST00000498300 ARHGEF5Q12774 1597 aa11.92□□□□□ -0.5
CCSER2-209ENST00000498300 TSPY4P0CV99 314 aa11.91□□□□□ -0.5
CCSER2-209ENST00000498300 TSPY10P0CW01 314 aa11.91□□□□□ -0.5
CCSER2-209ENST00000498300 PCDHB8Q9UN66 801 aa11.91□□□□□ -0.5
CCSER2-209ENST00000498300 PYGBP11216 843 aa11.9□□□□□ -0.5
CCSER2-209ENST00000498300 C3orf67Q6ZVT6 689 aa11.9□□□□□ -0.5
CCSER2-209ENST00000498300 PDCD7Q8N8D1 485 aaKnown RBP11.9□□□□□ -0.5
CCSER2-209ENST00000498300 IQGAP1P46940 1657 aa11.9□□□□□ -0.5
CCSER2-209ENST00000498300 ABCC3O15438 1527 aa11.89□□□□□ -0.51
CCSER2-209ENST00000498300 STRCP1A6NGW2 1772 aa11.89□□□□□ -0.51
CCSER2-209ENST00000498300 RNF17Q9BXT8 1623 aaKnown RBP11.89□□□□□ -0.51
CCSER2-209ENST00000498300 LRRC7Q96NW7 1537 aa11.87□□□□□ -0.51
CCSER2-209ENST00000498300 ERVK-7P63135 1459 aa11.87□□□□□ -0.51
CCSER2-209ENST00000498300 MAST1Q9Y2H9 1570 aa11.87□□□□□ -0.51
CCSER2-209ENST00000498300 DCAF8Q5TAQ9 597 aa11.86□□□□□ -0.51
CCSER2-209ENST00000498300 ZC3H13Q5T200 1668 aaKnown RBP11.86□□□□□ -0.51
CCSER2-209ENST00000498300 MROH1Q8NDA8 1641 aa11.86□□□□□ -0.51
CCSER2-209ENST00000498300 LRRC9Q6ZRR7 1453 aa11.85□□□□□ -0.51
CCSER2-209ENST00000498300 EIF2AK4Q9P2K8 1649 aaKnown RBP11.85□□□□□ -0.51
CCSER2-209ENST00000498300 UBR1Q8IWV7 1749 aa11.84□□□□□ -0.51
CCSER2-209ENST00000498300 L3MBTL3Q96JM7 780 aaPredicted RBP11.84□□□□□ -0.51
CCSER2-209ENST00000498300 SYNMO15061 1565 aa11.84□□□□□ -0.51
CCSER2-209ENST00000498300 CEP152O94986 1710 aa11.83□□□□□ -0.52
CCSER2-209ENST00000498300 KANK4Q5T7N3 995 aaPredicted RBP11.83□□□□□ -0.52
CCSER2-209ENST00000498300 CFAP65Q6ZU64 1925 aaKnown RBP11.82□□□□□ -0.52
CCSER2-209ENST00000498300 LTKP29376 864 aa11.82□□□□□ -0.52
CCSER2-209ENST00000498300 SCAF11Q99590 1463 aaKnown RBP11.82□□□□□ -0.52
CCSER2-209ENST00000498300 VPS8Q8N3P4 1428 aa11.81□□□□□ -0.52
CCSER2-209ENST00000498300 ARHGAP23Q9P227 1491 aa11.81□□□□□ -0.52
CCSER2-209ENST00000498300 DUOX2Q9NRD8 1548 aa11.81□□□□□ -0.52
CCSER2-209ENST00000498300 MYOM3Q5VTT5 1437 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms