RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 IQGAP1P46940 1657 aa24.84■■□□□ 1.57
CHRNA4-206ENST00000498043 MYO5BQ9ULV0 1848 aa24.83■■□□□ 1.57
CHRNA4-206ENST00000498043 ADGRF5Q8IZF2 1346 aa24.83■■□□□ 1.57
CHRNA4-206ENST00000498043 NRXN1Q9ULB1 1477 aa24.82■■□□□ 1.56
CHRNA4-206ENST00000498043 IDI1Q13907 227 aa24.81■■□□□ 1.56
CHRNA4-206ENST00000498043 SPATA31D1Q6ZQQ2 1576 aa24.8■■□□□ 1.56
CHRNA4-206ENST00000498043 TMEM131LA2VDJ0 1609 aa24.8■■□□□ 1.56
CHRNA4-206ENST00000498043 SLC52A1Q9NWF4 448 aa24.79■■□□□ 1.56
CHRNA4-206ENST00000498043 NEXMIFQ5QGS0 1516 aa24.79■■□□□ 1.56
CHRNA4-206ENST00000498043 POLR3GLQ9BT43 218 aa24.78■■□□□ 1.56
CHRNA4-206ENST00000498043 ESF1Q9H501 851 aaKnown RBP24.77■■□□□ 1.56
CHRNA4-206ENST00000498043 ANP32CO43423 234 aa24.76■■□□□ 1.55
CHRNA4-206ENST00000498043 YTHDC1Q96MU7 727 aaKnown RBP24.76■■□□□ 1.55
CHRNA4-206ENST00000498043 PIK3C2GO75747 1445 aa24.75■■□□□ 1.55
CHRNA4-206ENST00000498043 RPGRIP1LQ68CZ1 1315 aa24.75■■□□□ 1.55
CHRNA4-206ENST00000498043 CFAP70Q5T0N1 1121 aa24.74■■□□□ 1.55
CHRNA4-206ENST00000498043 SCAF11Q99590 1463 aaKnown RBP24.74■■□□□ 1.55
CHRNA4-206ENST00000498043 ZMYM3Q14202 1370 aa24.72■■□□□ 1.55
CHRNA4-206ENST00000498043 NUTM2DQ5VT03 806 aaPredicted RBP24.71■■□□□ 1.55
CHRNA4-206ENST00000498043 TESK2Q96S53 571 aa24.69■■□□□ 1.54
CHRNA4-206ENST00000498043 SETBP1Q9Y6X0 1596 aa24.69■■□□□ 1.54
CHRNA4-206ENST00000498043 DISP3Q9P2K9 1392 aa24.67■■□□□ 1.54
CHRNA4-206ENST00000498043 EIF3AQ14152 1382 aaKnown RBP24.66■■□□□ 1.54
CHRNA4-206ENST00000498043 FER1L4A9Z1Z3 1794 aa24.66■■□□□ 1.54
CHRNA4-206ENST00000498043 VGFO15240 615 aaPredicted RBP24.65■■□□□ 1.54
CHRNA4-206ENST00000498043 STAG3Q9UJ98 1225 aa24.65■■□□□ 1.54
CHRNA4-206ENST00000498043 ADGRB1O14514 1584 aa24.64■■□□□ 1.54
CHRNA4-206ENST00000498043 A2ML1A8K2U0 1454 aa24.62■■□□□ 1.53
CHRNA4-206ENST00000498043 C14orf93Q9H972 538 aaKnown RBP24.62■■□□□ 1.53
CHRNA4-206ENST00000498043 ZFYVE9O95405 1425 aa24.62■■□□□ 1.53
CHRNA4-206ENST00000498043 C3P01024 1663 aa24.6■■□□□ 1.53
CHRNA4-206ENST00000498043 MYO3AQ8NEV4 1616 aa24.6■■□□□ 1.53
CHRNA4-206ENST00000498043 TNRQ92752 1358 aa24.6■■□□□ 1.53
CHRNA4-206ENST00000498043 TMF1P82094 1093 aa24.6■■□□□ 1.53
CHRNA4-206ENST00000498043 SENP3Q9H4L4 574 aaPredicted RBP24.58■■□□□ 1.53
CHRNA4-206ENST00000498043 CCER2I3L3R5 266 aa24.58■■□□□ 1.53
CHRNA4-206ENST00000498043 TMEM132EQ6IEE7 984 aa24.56■■□□□ 1.52
CHRNA4-206ENST00000498043 CENPBP07199 599 aaPredicted RBP24.55■■□□□ 1.52
CHRNA4-206ENST00000498043 ASXL1Q8IXJ9 1541 aa24.54■■□□□ 1.52
CHRNA4-206ENST00000498043 RIMS2Q9UQ26 1411 aa24.54■■□□□ 1.52
CHRNA4-206ENST00000498043 QRICH2Q9H0J4 1663 aa24.53■■□□□ 1.52
CHRNA4-206ENST00000498043 UBR1Q8IWV7 1749 aa24.53■■□□□ 1.52
CHRNA4-206ENST00000498043 PRKRIP1Q9H875 184 aaPredicted RBP24.53■■□□□ 1.52
CHRNA4-206ENST00000498043 ARHGEF28Q8N1W1 1705 aaKnown RBP24.52■■□□□ 1.52
CHRNA4-206ENST00000498043 CEBPAP49715 358 aaPredicted RBP24.52■■□□□ 1.52
CHRNA4-206ENST00000498043 TRAK1Q9UPV9 953 aa24.52■■□□□ 1.52
CHRNA4-206ENST00000498043 KDM5AP29375 1690 aaKnown RBP24.52■■□□□ 1.52
CHRNA4-206ENST00000498043 PLPPR3Q6T4P5 718 aa24.5■■□□□ 1.51
CHRNA4-206ENST00000498043 CNGB1Q14028 1251 aaPredicted RBP24.49■■□□□ 1.51
CHRNA4-206ENST00000498043 ALKQ9UM73 1620 aa24.49■■□□□ 1.51
CHRNA4-206ENST00000498043 CENPJQ9HC77 1338 aaPredicted RBP24.48■■□□□ 1.51
CHRNA4-206ENST00000498043 MYOM1P52179 1685 aa24.48■■□□□ 1.51
CHRNA4-206ENST00000498043 NLRP1Q9C000 1473 aa24.46■■□□□ 1.51
CHRNA4-206ENST00000498043 RIMS1Q86UR5 1692 aaKnown RBP24.46■■□□□ 1.51
CHRNA4-206ENST00000498043 SBNO2Q9Y2G9 1366 aa24.45■■□□□ 1.51
CHRNA4-206ENST00000498043 SETD1AO15047 1707 aaKnown RBP24.44■■□□□ 1.5
CHRNA4-206ENST00000498043 CDCA8Q53HL2 280 aa24.44■■□□□ 1.5
CHRNA4-206ENST00000498043 NRXN3Q9Y4C0 1643 aa24.43■■□□□ 1.5
CHRNA4-206ENST00000498043 PTPRMP28827 1452 aa24.41■■□□□ 1.5
CHRNA4-206ENST00000498043 STK26Q9P289 416 aa24.4■■□□□ 1.5
CHRNA4-206ENST00000498043 YTHDC2Q9H6S0 1430 aaKnown RBP24.4■■□□□ 1.5
CHRNA4-206ENST00000498043 TMEM2Q9UHN6 1383 aa24.4■■□□□ 1.5
CHRNA4-206ENST00000498043 PANK3Q9H999 370 aa24.39■■□□□ 1.5
CHRNA4-206ENST00000498043 SLC24A1O60721 1099 aa24.39■■□□□ 1.49
CHRNA4-206ENST00000498043 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.39■■□□□ 1.49
CHRNA4-206ENST00000498043 CCDC184Q52MB2 194 aa24.38■■□□□ 1.49
CHRNA4-206ENST00000498043 ADAMTSL3P82987 1691 aa24.37■■□□□ 1.49
CHRNA4-206ENST00000498043 PER1O15534 1290 aaPredicted RBP24.35■■□□□ 1.49
CHRNA4-206ENST00000498043 TULP4Q9NRJ4 1543 aa24.34■■□□□ 1.49
CHRNA4-206ENST00000498043 MRS2Q9HD23 443 aa24.34■■□□□ 1.49
CHRNA4-206ENST00000498043 SAFB2Q14151 953 aaKnown RBP eCLIP24.33■■□□□ 1.49
CHRNA4-206ENST00000498043 HDGFP51858 240 aaKnown RBP24.33■■□□□ 1.48
CHRNA4-206ENST00000498043 KTN1Q86UP2 1357 aaKnown RBP24.32■■□□□ 1.48
CHRNA4-206ENST00000498043 PRAM1Q96QH2 718 aa24.29■■□□□ 1.48
CHRNA4-206ENST00000498043 SLIT1O75093 1534 aa24.29■■□□□ 1.48
CHRNA4-206ENST00000498043 CEP170BQ9Y4F5 1589 aaPredicted RBP24.28■■□□□ 1.48
CHRNA4-206ENST00000498043 PARD3Q8TEW0 1356 aa24.28■■□□□ 1.48
CHRNA4-206ENST00000498043 BCANQ96GW7 911 aa24.28■■□□□ 1.48
CHRNA4-206ENST00000498043 METP08581 1390 aa24.28■■□□□ 1.48
CHRNA4-206ENST00000498043 DLC1Q96QB1 1528 aa24.27■■□□□ 1.48
CHRNA4-206ENST00000498043 LRPPRCP42704 1394 aaKnown RBP24.27■■□□□ 1.48
CHRNA4-206ENST00000498043 RALBP1Q15311 655 aa24.27■■□□□ 1.48
CHRNA4-206ENST00000498043 CC2D1BQ5T0F9 858 aaKnown RBP24.27■■□□□ 1.48
CHRNA4-206ENST00000498043 ARHGAP23Q9P227 1491 aa24.26■■□□□ 1.47
CHRNA4-206ENST00000498043 EVC2Q86UK5 1308 aa24.26■■□□□ 1.47
CHRNA4-206ENST00000498043 LTKP29376 864 aa24.26■■□□□ 1.47
CHRNA4-206ENST00000498043 POGKQ9P215 609 aa24.26■■□□□ 1.47
CHRNA4-206ENST00000498043 MYBBP1AQ9BQG0 1328 aaKnown RBP24.25■■□□□ 1.47
CHRNA4-206ENST00000498043 PLEKHG1Q9ULL1 1385 aa24.25■■□□□ 1.47
CHRNA4-206ENST00000498043 KNDC1Q76NI1 1749 aa24.25■■□□□ 1.47
CHRNA4-206ENST00000498043 KNSTRNQ9Y448 316 aa24.24■■□□□ 1.47
CHRNA4-206ENST00000498043 ADAMTS13Q76LX8 1427 aa24.23■■□□□ 1.47
CHRNA4-206ENST00000498043 TXNDC2Q86VQ3 553 aa24.23■■□□□ 1.47
CHRNA4-206ENST00000498043 MINK1Q8N4C8 1332 aaPredicted RBP24.23■■□□□ 1.47
CHRNA4-206ENST00000498043 ZNF142P52746 1687 aaPredicted RBP24.22■■□□□ 1.47
CHRNA4-206ENST00000498043 FAM9BQ8IZU0 186 aa24.22■■□□□ 1.47
CHRNA4-206ENST00000498043 EID1Q9Y6B2 187 aa24.22■■□□□ 1.47
CHRNA4-206ENST00000498043 ABCC11Q96J66 1382 aa24.21■■□□□ 1.47
CHRNA4-206ENST00000498043 TMC1Q8TDI8 760 aa24.2■■□□□ 1.47
CHRNA4-206ENST00000498043 PLEKHH1Q9ULM0 1364 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms