RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 NBPF26B4DH59 902 aa6.76□□□□□ -1.33
RIF1-212ENST00000498041 FECHP22830 423 aa6.76□□□□□ -1.33
RIF1-212ENST00000498041 COPS2P61201 443 aa6.76□□□□□ -1.33
RIF1-212ENST00000498041 LAPTM4AQ15012 233 aa6.76□□□□□ -1.33
RIF1-212ENST00000498041 BARGINQ6ZT62 677 aa6.76□□□□□ -1.33
RIF1-212ENST00000498041 NUDT18Q6ZVK8 323 aa6.76□□□□□ -1.33
RIF1-212ENST00000498041 IL21Q9HBE4 155 aa6.76□□□□□ -1.33
RIF1-212ENST00000498041 MAP2K5Q13163 448 aa6.75□□□□□ -1.33
RIF1-212ENST00000498041 KRI1Q8N9T8 703 aaKnown RBP6.75□□□□□ -1.33
RIF1-212ENST00000498041 NKX2-3Q8TAU0 364 aa6.75□□□□□ -1.33
RIF1-212ENST00000498041 MINK1Q8N4C8 1332 aaPredicted RBP6.75□□□□□ -1.33
RIF1-212ENST00000498041 LCE2BO14633 110 aa6.74□□□□□ -1.33
RIF1-212ENST00000498041 TPRNQ4KMQ1 711 aa6.74□□□□□ -1.33
RIF1-212ENST00000498041 OATP04181 439 aa6.73□□□□□ -1.33
RIF1-212ENST00000498041 APLP1P51693 650 aa6.73□□□□□ -1.33
RIF1-212ENST00000498041 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.73□□□□□ -1.33
RIF1-212ENST00000498041 ADGRG1Q9Y653 693 aa6.73□□□□□ -1.33
RIF1-212ENST00000498041 IRF6O14896 467 aa6.72□□□□□ -1.33
RIF1-212ENST00000498041 RBM46Q8TBY0 533 aaKnown RBP6.72□□□□□ -1.33
RIF1-212ENST00000498041 FAM161AQ3B820 660 aa6.71□□□□□ -1.34
RIF1-212ENST00000498041 SWT1Q5T5J6 900 aaKnown RBP6.71□□□□□ -1.34
RIF1-212ENST00000498041 EYA1Q99502 592 aa6.71□□□□□ -1.34
RIF1-212ENST00000498041 PDZRN3Q9UPQ7 1066 aa6.71□□□□□ -1.34
RIF1-212ENST00000498041 NRG2O14511 850 aaPredicted RBP6.7□□□□□ -1.34
RIF1-212ENST00000498041 PXYLP1Q8TE99 480 aa6.7□□□□□ -1.34
RIF1-212ENST00000498041 ZNF787Q6DD87 383 aa6.69□□□□□ -1.34
RIF1-212ENST00000498041 METTL3Q86U44 580 aaKnown RBP6.69□□□□□ -1.34
RIF1-212ENST00000498041 CCDC102AQ96A19 550 aa6.69□□□□□ -1.34
RIF1-212ENST00000498041 AK7Q96M32 723 aa6.69□□□□□ -1.34
RIF1-212ENST00000498041 SLC24A3Q9HC58 644 aa6.69□□□□□ -1.34
RIF1-212ENST00000498041 GGCXP38435 758 aa6.68□□□□□ -1.34
RIF1-212ENST00000498041 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.67□□□□□ -1.34
RIF1-212ENST00000498041 DNAJB2P25686 324 aa6.67□□□□□ -1.34
RIF1-212ENST00000498041 V9GY48 417 aaPredicted RBP6.67□□□□□ -1.34
RIF1-212ENST00000498041 RCCD1A6NED2 376 aa6.66□□□□□ -1.34
RIF1-212ENST00000498041 PRKCSHP14314 528 aaPredicted RBP6.66□□□□□ -1.34
RIF1-212ENST00000498041 SLC4A3P48751 1232 aa6.66□□□□□ -1.34
RIF1-212ENST00000498041 SLF2Q8IX21 1173 aa6.66□□□□□ -1.34
RIF1-212ENST00000498041 PHOX2BQ99453 314 aa6.65□□□□□ -1.34
RIF1-212ENST00000498041 TRIM66O15016 1216 aa6.64□□□□□ -1.35
RIF1-212ENST00000498041 TMEM134Q9H6X4 195 aa6.64□□□□□ -1.35
RIF1-212ENST00000498041 PCDHB3Q9Y5E6 796 aa6.64□□□□□ -1.35
RIF1-212ENST00000498041 TLL1O43897 1013 aa6.63□□□□□ -1.35
RIF1-212ENST00000498041 ZPR1O75312 459 aa6.63□□□□□ -1.35
RIF1-212ENST00000498041 BLOC1S3Q6QNY0 202 aa6.63□□□□□ -1.35
RIF1-212ENST00000498041 PPEF1O14829 653 aaPredicted RBP6.62□□□□□ -1.35
RIF1-212ENST00000498041 AMHR2Q16671 573 aa6.62□□□□□ -1.35
RIF1-212ENST00000498041 NLRP7Q8WX94 980 aa6.62□□□□□ -1.35
RIF1-212ENST00000498041 NECTIN2Q92692 538 aa6.62□□□□□ -1.35
RIF1-212ENST00000498041 DAXXQ9UER7 740 aaPredicted RBP6.62□□□□□ -1.35
RIF1-212ENST00000498041 CLCN1P35523 988 aa6.61□□□□□ -1.35
RIF1-212ENST00000498041 SLC19A1P41440 591 aa6.61□□□□□ -1.35
RIF1-212ENST00000498041 MDM2Q00987 491 aaPredicted RBP6.61□□□□□ -1.35
RIF1-212ENST00000498041 RNF223E7ERA6 249 aa6.6□□□□□ -1.35
RIF1-212ENST00000498041 PDE4DQ08499 809 aa6.6□□□□□ -1.35
RIF1-212ENST00000498041 TTLL12Q14166 644 aaPredicted RBP6.6□□□□□ -1.35
RIF1-212ENST00000498041 PKDCCQ504Y2 493 aa6.6□□□□□ -1.35
RIF1-212ENST00000498041 ZNF775Q96BV0 537 aaPredicted RBP6.6□□□□□ -1.35
RIF1-212ENST00000498041 GPCPD1Q9NPB8 672 aa6.6□□□□□ -1.35
RIF1-212ENST00000498041 TMUB1Q9BVT8 246 aa6.59□□□□□ -1.35
RIF1-212ENST00000498041 TNFRSF10AO00220 468 aa6.58□□□□□ -1.36
RIF1-212ENST00000498041 S1PR4O95977 384 aa6.58□□□□□ -1.36
RIF1-212ENST00000498041 RSPH4AQ5TD94 716 aa6.58□□□□□ -1.36
RIF1-212ENST00000498041 SULF1Q8IWU6 871 aa6.58□□□□□ -1.36
RIF1-212ENST00000498041 PRR14Q9BWN1 585 aa6.58□□□□□ -1.36
RIF1-212ENST00000498041 DDX11L8A8MPP1 907 aa6.57□□□□□ -1.36
RIF1-212ENST00000498041 PARP9Q8IXQ6 854 aa6.57□□□□□ -1.36
RIF1-212ENST00000498041 REPIN1Q9BWE0 567 aaKnown RBP6.57□□□□□ -1.36
RIF1-212ENST00000498041 FAM187AA6NFU0 413 aa6.56□□□□□ -1.36
RIF1-212ENST00000498041 GIGYF2Q6Y7W6 1299 aaKnown RBP6.56□□□□□ -1.36
RIF1-212ENST00000498041 TRIM67Q6ZTA4 783 aa6.56□□□□□ -1.36
RIF1-212ENST00000498041 FAM217BQ9NTX9 383 aaPredicted RBP6.56□□□□□ -1.36
RIF1-212ENST00000498041 POTECB2RU33 542 aa6.55□□□□□ -1.36
RIF1-212ENST00000498041 CFHP08603 1231 aa6.55□□□□□ -1.36
RIF1-212ENST00000498041 SLC10A3P09131 477 aa6.55□□□□□ -1.36
RIF1-212ENST00000498041 SSTR3P32745 418 aaPredicted RBP6.55□□□□□ -1.36
RIF1-212ENST00000498041 KMT5BQ4FZB7 885 aa6.55□□□□□ -1.36
RIF1-212ENST00000498041 ZNF697Q5TEC3 545 aa6.55□□□□□ -1.36
RIF1-212ENST00000498041 RDH13Q8NBN7 331 aa6.55□□□□□ -1.36
RIF1-212ENST00000498041 EMID1Q96A84 441 aaPredicted RBP6.55□□□□□ -1.36
RIF1-212ENST00000498041 CD46P15529 392 aa6.54□□□□□ -1.36
RIF1-212ENST00000498041 SPRYD7Q5W111 196 aa6.54□□□□□ -1.36
RIF1-212ENST00000498041 LIAT1Q6ZQX7 453 aa6.54□□□□□ -1.36
RIF1-212ENST00000498041 MYT1Q01538 1121 aa6.53□□□□□ -1.36
RIF1-212ENST00000498041 FOXC1Q12948 553 aa6.53□□□□□ -1.36
RIF1-212ENST00000498041 NEUROD2Q15784 382 aa6.53□□□□□ -1.36
RIF1-212ENST00000498041 ZNF598Q86UK7 904 aaKnown RBP6.53□□□□□ -1.36
RIF1-212ENST00000498041 GCGRP47871 477 aa6.52□□□□□ -1.37
RIF1-212ENST00000498041 PUS10Q3MIT2 529 aaKnown RBP6.52□□□□□ -1.37
RIF1-212ENST00000498041 KDM4CQ9H3R0 1056 aa6.52□□□□□ -1.37
RIF1-212ENST00000498041 GPBP1L1Q9HC44 474 aaPredicted RBP6.52□□□□□ -1.37
RIF1-212ENST00000498041 ST8SIA5O15466 376 aa6.51□□□□□ -1.37
RIF1-212ENST00000498041 DGAT1O75907 488 aa6.51□□□□□ -1.37
RIF1-212ENST00000498041 MS4A1P11836 297 aa6.51□□□□□ -1.37
RIF1-212ENST00000498041 BRPF1P55201 1214 aaPredicted RBP6.51□□□□□ -1.37
RIF1-212ENST00000498041 ANKLE1Q8NAG6 615 aa6.51□□□□□ -1.37
RIF1-212ENST00000498041 ACTN4O43707 911 aaKnown RBP6.5□□□□□ -1.37
RIF1-212ENST00000498041 ADH1BP00325 375 aa6.5□□□□□ -1.37
RIF1-212ENST00000498041 BEGAINQ9BUH8 593 aa6.5□□□□□ -1.37
RIF1-212ENST00000498041 SLC6A16Q9GZN6 736 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 1364.6 ms