RNA–Protein interactions for RNA: ENST00000497410.5

BRD9-214, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,916 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-214ENST00000497410 HIRIP3Q9BW71 556 aaPredicted RBP23.51■■□□□ 1.35
BRD9-214ENST00000497410 NEXMIFQ5QGS0 1516 aa23.51■■□□□ 1.35
BRD9-214ENST00000497410 C3P01024 1663 aa23.5■■□□□ 1.35
BRD9-214ENST00000497410 USP47Q96K76 1375 aa23.5■■□□□ 1.35
BRD9-214ENST00000497410 CARD11Q9BXL7 1154 aa23.49■■□□□ 1.35
BRD9-214ENST00000497410 MYT1Q01538 1121 aa23.48■■□□□ 1.35
BRD9-214ENST00000497410 NBPF1Q3BBV0 1214 aa23.46■■□□□ 1.35
BRD9-214ENST00000497410 TNRQ92752 1358 aa23.46■■□□□ 1.35
BRD9-214ENST00000497410 ADGRF5Q8IZF2 1346 aa23.45■■□□□ 1.35
BRD9-214ENST00000497410 KDM5AP29375 1690 aaKnown RBP23.45■■□□□ 1.35
BRD9-214ENST00000497410 ZFYVE9O95405 1425 aa23.45■■□□□ 1.34
BRD9-214ENST00000497410 POLR1AO95602 1720 aaPredicted RBP23.44■■□□□ 1.34
BRD9-214ENST00000497410 ADAMTSL3P82987 1691 aa23.44■■□□□ 1.34
BRD9-214ENST00000497410 PIK3C2GO75747 1445 aa23.44■■□□□ 1.34
BRD9-214ENST00000497410 A2ML1A8K2U0 1454 aa23.43■■□□□ 1.34
BRD9-214ENST00000497410 IQGAP1P46940 1657 aa23.42■■□□□ 1.34
BRD9-214ENST00000497410 VGFO15240 615 aaPredicted RBP23.39■■□□□ 1.34
BRD9-214ENST00000497410 RIMS1Q86UR5 1692 aaKnown RBP23.39■■□□□ 1.34
BRD9-214ENST00000497410 SETBP1Q9Y6X0 1596 aa23.39■■□□□ 1.33
BRD9-214ENST00000497410 NLRP1Q9C000 1473 aa23.39■■□□□ 1.33
BRD9-214ENST00000497410 UBR1Q8IWV7 1749 aa23.38■■□□□ 1.33
BRD9-214ENST00000497410 CEBPAP49715 358 aaPredicted RBP23.36■■□□□ 1.33
BRD9-214ENST00000497410 STAG3Q9UJ98 1225 aa23.36■■□□□ 1.33
BRD9-214ENST00000497410 WASHC2AQ641Q2 1341 aa23.35■■□□□ 1.33
BRD9-214ENST00000497410 SCAF11Q99590 1463 aaKnown RBP23.35■■□□□ 1.33
BRD9-214ENST00000497410 CFAP70Q5T0N1 1121 aa23.35■■□□□ 1.33
BRD9-214ENST00000497410 C14orf93Q9H972 538 aaKnown RBP23.34■■□□□ 1.33
BRD9-214ENST00000497410 ST20-MTHFSA0A0A6YYL1 179 aa23.33■■□□□ 1.33
BRD9-214ENST00000497410 CCDC7Q96M83 1385 aa23.33■■□□□ 1.32
BRD9-214ENST00000497410 ADGRB1O14514 1584 aa23.32■■□□□ 1.32
BRD9-214ENST00000497410 C11orf95C9JLR9 678 aaPredicted RBP23.32■■□□□ 1.32
BRD9-214ENST00000497410 RIMS2Q9UQ26 1411 aa23.31■■□□□ 1.32
BRD9-214ENST00000497410 MYO3AQ8NEV4 1616 aa23.3■■□□□ 1.32
BRD9-214ENST00000497410 DDX10Q13206 875 aaKnown RBP23.29■■□□□ 1.32
BRD9-214ENST00000497410 NUTM2DQ5VT03 806 aaPredicted RBP23.29■■□□□ 1.32
BRD9-214ENST00000497410 KIF7Q2M1P5 1343 aa23.28■■□□□ 1.32
BRD9-214ENST00000497410 EIF3AQ14152 1382 aaKnown RBP23.26■■□□□ 1.31
BRD9-214ENST00000497410 TMEM2Q9UHN6 1383 aa23.25■■□□□ 1.31
BRD9-214ENST00000497410 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.25■■□□□ 1.31
BRD9-214ENST00000497410 TESK2Q96S53 571 aa23.25■■□□□ 1.31
BRD9-214ENST00000497410 ASXL1Q8IXJ9 1541 aa23.23■■□□□ 1.31
BRD9-214ENST00000497410 ALKQ9UM73 1620 aa23.23■■□□□ 1.31
BRD9-214ENST00000497410 SETD1AO15047 1707 aaKnown RBP23.22■■□□□ 1.31
BRD9-214ENST00000497410 HDGFP51858 240 aaKnown RBP23.21■■□□□ 1.31
BRD9-214ENST00000497410 SLIT1O75093 1534 aa23.21■■□□□ 1.31
BRD9-214ENST00000497410 NRXN3Q9Y4C0 1643 aa23.21■■□□□ 1.31
BRD9-214ENST00000497410 SETD1BQ9UPS6 1966 aaKnown RBP23.21■■□□□ 1.31
BRD9-214ENST00000497410 ARHGAP23Q9P227 1491 aa23.2■■□□□ 1.31
BRD9-214ENST00000497410 ZNF142P52746 1687 aaPredicted RBP23.2■■□□□ 1.3
BRD9-214ENST00000497410 CEP170BQ9Y4F5 1589 aaPredicted RBP23.2■■□□□ 1.3
BRD9-214ENST00000497410 CENPBP07199 599 aaPredicted RBP23.2■■□□□ 1.3
BRD9-214ENST00000497410 PLPPR3Q6T4P5 718 aa23.19■■□□□ 1.3
BRD9-214ENST00000497410 MIER1Q8N108 512 aa23.18■■□□□ 1.3
BRD9-214ENST00000497410 ARHGEF28Q8N1W1 1705 aaKnown RBP23.18■■□□□ 1.3
BRD9-214ENST00000497410 PTPRMP28827 1452 aa23.17■■□□□ 1.3
BRD9-214ENST00000497410 TMEM132EQ6IEE7 984 aa23.17■■□□□ 1.3
BRD9-214ENST00000497410 SBNO2Q9Y2G9 1366 aa23.16■■□□□ 1.3
BRD9-214ENST00000497410 DISP3Q9P2K9 1392 aa23.15■■□□□ 1.3
BRD9-214ENST00000497410 THEMISQ8N1K5 641 aaPredicted RBP23.14■■□□□ 1.3
BRD9-214ENST00000497410 TMF1P82094 1093 aa23.14■■□□□ 1.29
BRD9-214ENST00000497410 SLC24A1O60721 1099 aa23.13■■□□□ 1.29
BRD9-214ENST00000497410 QRICH2Q9H0J4 1663 aa23.12■■□□□ 1.29
BRD9-214ENST00000497410 YTHDC2Q9H6S0 1430 aaKnown RBP23.12■■□□□ 1.29
BRD9-214ENST00000497410 PLEKHG1Q9ULL1 1385 aa23.12■■□□□ 1.29
BRD9-214ENST00000497410 TRAK1Q9UPV9 953 aa23.12■■□□□ 1.29
BRD9-214ENST00000497410 CENPJQ9HC77 1338 aaPredicted RBP23.1■■□□□ 1.29
BRD9-214ENST00000497410 LTKP29376 864 aa23.1■■□□□ 1.29
BRD9-214ENST00000497410 ADAMTS13Q76LX8 1427 aa23.08■■□□□ 1.28
BRD9-214ENST00000497410 EID1Q9Y6B2 187 aa23.08■■□□□ 1.28
BRD9-214ENST00000497410 DLC1Q96QB1 1528 aa23.08■■□□□ 1.28
BRD9-214ENST00000497410 TXNDC2Q86VQ3 553 aa23.07■■□□□ 1.28
BRD9-214ENST00000497410 SENP3Q9H4L4 574 aaPredicted RBP23.06■■□□□ 1.28
BRD9-214ENST00000497410 LRPPRCP42704 1394 aaKnown RBP23.06■■□□□ 1.28
BRD9-214ENST00000497410 MED14O60244 1454 aa23.06■■□□□ 1.28
BRD9-214ENST00000497410 CDCA8Q53HL2 280 aa23.06■■□□□ 1.28
BRD9-214ENST00000497410 POLR3GLQ9BT43 218 aa23.06■■□□□ 1.28
BRD9-214ENST00000497410 KNDC1Q76NI1 1749 aa23.05■■□□□ 1.28
BRD9-214ENST00000497410 METP08581 1390 aa23.03■■□□□ 1.28
BRD9-214ENST00000497410 ABCC11Q96J66 1382 aa23.03■■□□□ 1.28
BRD9-214ENST00000497410 DIP2AQ14689 1571 aa23.02■■□□□ 1.28
BRD9-214ENST00000497410 ANP32CO43423 234 aa23.02■■□□□ 1.28
BRD9-214ENST00000497410 STK26Q9P289 416 aa23.01■■□□□ 1.27
BRD9-214ENST00000497410 TECPR2O15040 1411 aa23.01■■□□□ 1.27
BRD9-214ENST00000497410 MYOM1P52179 1685 aa23.01■■□□□ 1.27
BRD9-214ENST00000497410 CPS1P31327 1500 aa22.98■■□□□ 1.27
BRD9-214ENST00000497410 BCANQ96GW7 911 aa22.97■■□□□ 1.27
BRD9-214ENST00000497410 TULP4Q9NRJ4 1543 aa22.97■■□□□ 1.27
BRD9-214ENST00000497410 SIRT1Q96EB6 747 aa22.96■■□□□ 1.27
BRD9-214ENST00000497410 TBX22Q9Y458 520 aa22.96■■□□□ 1.27
BRD9-214ENST00000497410 PRAM1Q96QH2 718 aa22.95■■□□□ 1.26
BRD9-214ENST00000497410 FAM135BQ49AJ0 1406 aa22.95■■□□□ 1.26
BRD9-214ENST00000497410 PUS7Q96PZ0 661 aaKnown RBP22.94■■□□□ 1.26
BRD9-214ENST00000497410 ANKLE2Q86XL3 938 aa22.94■■□□□ 1.26
BRD9-214ENST00000497410 GTF3C3Q9Y5Q9 886 aa22.94■■□□□ 1.26
BRD9-214ENST00000497410 POGKQ9P215 609 aa22.92■■□□□ 1.26
BRD9-214ENST00000497410 EVC2Q86UK5 1308 aa22.92■■□□□ 1.26
BRD9-214ENST00000497410 KDM4FA0A1W2PPD8 638 aa22.92■■□□□ 1.26
BRD9-214ENST00000497410 CCER2I3L3R5 266 aa22.91■■□□□ 1.26
BRD9-214ENST00000497410 SLC26A8Q96RN1 970 aa22.9■■□□□ 1.26
BRD9-214ENST00000497410 PRKRIP1Q9H875 184 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms