RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 PDE4AP27815 886 aa21.61■■□□□ 1.05
PCBP4-216ENST00000497390 PTPRTO14522 1441 aa21.6■■□□□ 1.05
PCBP4-216ENST00000497390 SCAF11Q99590 1463 aaKnown RBP21.6■■□□□ 1.05
PCBP4-216ENST00000497390 ADGRF5Q8IZF2 1346 aa21.6■■□□□ 1.05
PCBP4-216ENST00000497390 SCAPERQ9BY12 1400 aa21.6■■□□□ 1.05
PCBP4-216ENST00000497390 DUSP27Q5VZP5 1158 aa21.59■■□□□ 1.05
PCBP4-216ENST00000497390 UHRF1BP1LA0JNW5 1464 aa21.59■■□□□ 1.05
PCBP4-216ENST00000497390 SPINK5Q9NQ38 1064 aaPredicted RBP21.58■■□□□ 1.05
PCBP4-216ENST00000497390 WDR43Q15061 677 aaKnown RBP eCLIP21.58■■□□□ 1.04
PCBP4-216ENST00000497390 DEPDC5O75140 1603 aa21.58■■□□□ 1.04
PCBP4-216ENST00000497390 DEKP35659 375 aaKnown RBP21.57■■□□□ 1.04
PCBP4-216ENST00000497390 ZBTB47Q9UFB7 747 aaPredicted RBP21.56■■□□□ 1.04
PCBP4-216ENST00000497390 FANCAO15360 1455 aa21.56■■□□□ 1.04
PCBP4-216ENST00000497390 ATP7AQ04656 1500 aa21.56■■□□□ 1.04
PCBP4-216ENST00000497390 BACH2Q9BYV9 841 aa21.56■■□□□ 1.04
PCBP4-216ENST00000497390 SYNMO15061 1565 aa21.55■■□□□ 1.04
PCBP4-216ENST00000497390 CFAP65Q6ZU64 1925 aaKnown RBP21.55■■□□□ 1.04
PCBP4-216ENST00000497390 TET3O43151 1660 aa21.55■■□□□ 1.04
PCBP4-216ENST00000497390 TCERG1O14776 1098 aaKnown RBP21.55■■□□□ 1.04
PCBP4-216ENST00000497390 RTEL1-TNFRSF6BF6WH68 1400 aa21.55■■□□□ 1.04
PCBP4-216ENST00000497390 ASXL1Q8IXJ9 1541 aa21.54■■□□□ 1.04
PCBP4-216ENST00000497390 ZNF521Q96K83 1311 aa21.54■■□□□ 1.04
PCBP4-216ENST00000497390 CARD14Q9BXL6 1004 aa21.54■■□□□ 1.04
PCBP4-216ENST00000497390 DMRT2Q9Y5R5 561 aa21.54■■□□□ 1.04
PCBP4-216ENST00000497390 MROH1Q8NDA8 1641 aa21.52■■□□□ 1.04
PCBP4-216ENST00000497390 INSRP06213 1382 aa21.52■■□□□ 1.04
PCBP4-216ENST00000497390 INO80Q9ULG1 1556 aaPredicted RBP21.52■■□□□ 1.04
PCBP4-216ENST00000497390 ABCA6Q8N139 1617 aa21.51■■□□□ 1.03
PCBP4-216ENST00000497390 APAF1O14727 1248 aa21.5■■□□□ 1.03
PCBP4-216ENST00000497390 VWDEQ8N2E2 1590 aa21.5■■□□□ 1.03
PCBP4-216ENST00000497390 ERVK-7P63135 1459 aa21.5■■□□□ 1.03
PCBP4-216ENST00000497390 MROH2AA6NES4 1674 aa21.5■■□□□ 1.03
PCBP4-216ENST00000497390 ABCA9Q8IUA7 1624 aa21.49■■□□□ 1.03
PCBP4-216ENST00000497390 ADGRL1O94910 1474 aa21.49■■□□□ 1.03
PCBP4-216ENST00000497390 GOLGA2Q08379 1002 aa21.49■■□□□ 1.03
PCBP4-216ENST00000497390 KDM5AP29375 1690 aaKnown RBP21.48■■□□□ 1.03
PCBP4-216ENST00000497390 LAS1LQ9Y4W2 734 aaKnown RBP21.47■■□□□ 1.03
PCBP4-216ENST00000497390 KANK1Q14678 1352 aa21.47■■□□□ 1.03
PCBP4-216ENST00000497390 CHGAP10645 457 aaKnown RBP21.47■■□□□ 1.03
PCBP4-216ENST00000497390 MAP3K4Q9Y6R4 1608 aa21.46■■□□□ 1.03
PCBP4-216ENST00000497390 CDCA8Q53HL2 280 aa21.46■■□□□ 1.03
PCBP4-216ENST00000497390 SLFN5Q08AF3 891 aa21.46■■□□□ 1.03
PCBP4-216ENST00000497390 PIK3C2GO75747 1445 aa21.45■■□□□ 1.02
PCBP4-216ENST00000497390 BCAR3O75815 825 aa21.45■■□□□ 1.02
PCBP4-216ENST00000497390 KDM2BQ8NHM5 1336 aa21.45■■□□□ 1.02
PCBP4-216ENST00000497390 ARAP3Q8WWN8 1544 aa21.45■■□□□ 1.02
PCBP4-216ENST00000497390 TNNT2P45379 298 aaPredicted RBP21.45■■□□□ 1.02
PCBP4-216ENST00000497390 SENP3Q9H4L4 574 aaPredicted RBP21.45■■□□□ 1.02
PCBP4-216ENST00000497390 PPRC1Q5VV67 1664 aaKnown RBP21.43■■□□□ 1.02
PCBP4-216ENST00000497390 EIF3AQ14152 1382 aaKnown RBP21.43■■□□□ 1.02
PCBP4-216ENST00000497390 MS4A1P11836 297 aa21.42■■□□□ 1.02
PCBP4-216ENST00000497390 TRAK1Q9UPV9 953 aa21.42■■□□□ 1.02
PCBP4-216ENST00000497390 KIF1BO60333 1816 aa21.42■■□□□ 1.02
PCBP4-216ENST00000497390 KIDINS220Q9ULH0 1771 aa21.42■■□□□ 1.02
PCBP4-216ENST00000497390 TMEM132EQ6IEE7 984 aa21.41■■□□□ 1.02
PCBP4-216ENST00000497390 NUTM2DQ5VT03 806 aaPredicted RBP21.41■■□□□ 1.02
PCBP4-216ENST00000497390 NOS1P29475 1434 aa21.41■■□□□ 1.02
PCBP4-216ENST00000497390 KIAA1210Q9ULL0 1709 aa21.4■■□□□ 1.02
PCBP4-216ENST00000497390 ASXL2Q76L83 1435 aa21.4■■□□□ 1.02
PCBP4-216ENST00000497390 IFT172Q9UG01 1749 aa21.39■■□□□ 1.02
PCBP4-216ENST00000497390 SLC4A3P48751 1232 aa21.39■■□□□ 1.01
PCBP4-216ENST00000497390 TRMT2AQ8IZ69 625 aaKnown RBP21.39■■□□□ 1.01
PCBP4-216ENST00000497390 EFCAB6Q5THR3 1501 aa21.39■■□□□ 1.01
PCBP4-216ENST00000497390 SLC12A5Q9H2X9 1139 aa21.38■■□□□ 1.01
PCBP4-216ENST00000497390 GGT6Q6P531 493 aa21.37■■□□□ 1.01
PCBP4-216ENST00000497390 NPC1L1Q9UHC9 1359 aa21.37■■□□□ 1.01
PCBP4-216ENST00000497390 NEUROD2Q15784 382 aa21.37■■□□□ 1.01
PCBP4-216ENST00000497390 MYOM2P54296 1465 aa21.37■■□□□ 1.01
PCBP4-216ENST00000497390 STAC3Q96MF2 364 aa21.36■■□□□ 1.01
PCBP4-216ENST00000497390 RRP7AQ9Y3A4 280 aaKnown RBP21.36■■□□□ 1.01
PCBP4-216ENST00000497390 RGS3P49796 1198 aa21.36■■□□□ 1.01
PCBP4-216ENST00000497390 CENPJQ9HC77 1338 aaPredicted RBP21.32■■□□□ 1
PCBP4-216ENST00000497390 NSD3Q9BZ95 1437 aa21.32■■□□□ 1
PCBP4-216ENST00000497390 NKTRP30414 1462 aaKnown RBP21.32■■□□□ 1
PCBP4-216ENST00000497390 CENPQQ7L2Z9 268 aaPredicted RBP21.31■■□□□ 1
PCBP4-216ENST00000497390 NPATQ14207 1427 aa21.31■■□□□ 1
PCBP4-216ENST00000497390 C8orf34Q49A92 452 aa21.31■■□□□ 1
PCBP4-216ENST00000497390 NRXN1Q9ULB1 1477 aa21.31■■□□□ 1
PCBP4-216ENST00000497390 RTL5Q5HYW3 569 aaPredicted RBP21.3■■□□□ 1
PCBP4-216ENST00000497390 IGHDP01880 384 aa21.29■■□□□ 1
PCBP4-216ENST00000497390 WWC1Q8IX03 1113 aa21.29■■□□□ 1
PCBP4-216ENST00000497390 ADGRB3O60242 1522 aa21.28■■□□□ 1
PCBP4-216ENST00000497390 PANK1Q8TE04 598 aa21.28■■□□□ 1
PCBP4-216ENST00000497390 TNNQ9UQP3 1299 aa21.28■■□□□ 1
PCBP4-216ENST00000497390 NEFMP07197 916 aa21.28■■□□□ 1
PCBP4-216ENST00000497390 NEURL4Q96JN8 1562 aa21.28■■□□□ 1
PCBP4-216ENST00000497390 SHPRHQ149N8 1683 aa21.28■■□□□ 1
PCBP4-216ENST00000497390 FRMPD1Q5SYB0 1578 aa21.27■■□□□ 1
PCBP4-216ENST00000497390 MYO3AQ8NEV4 1616 aa21.27■□□□□ 0.99
PCBP4-216ENST00000497390 E9PSI1 815 aa21.26■□□□□ 0.99
PCBP4-216ENST00000497390 SAFB2Q14151 953 aaKnown RBP eCLIP21.26■□□□□ 0.99
PCBP4-216ENST00000497390 MORC1Q86VD1 984 aa21.26■□□□□ 0.99
PCBP4-216ENST00000497390 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.26■□□□□ 0.99
PCBP4-216ENST00000497390 QRICH2Q9H0J4 1663 aa21.26■□□□□ 0.99
PCBP4-216ENST00000497390 COG6Q9Y2V7 657 aa21.25■□□□□ 0.99
PCBP4-216ENST00000497390 PPLO60437 1756 aa21.25■□□□□ 0.99
PCBP4-216ENST00000497390 ZNF518AQ6AHZ1 1483 aa21.25■□□□□ 0.99
PCBP4-216ENST00000497390 C14orf93Q9H972 538 aaKnown RBP21.25■□□□□ 0.99
PCBP4-216ENST00000497390 BCL2L13Q9BXK5 485 aa21.24■□□□□ 0.99
PCBP4-216ENST00000497390 ADGRB1O14514 1584 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms