RNA–Protein interactions for RNA: ENST00000497055.1

SGIP1-214, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-214ENST00000497055 KIAA0556O60303 1618 aa8.25□□□□□ -1.09
SGIP1-214ENST00000497055 P3H3Q8IVL6 736 aa8.25□□□□□ -1.09
SGIP1-214ENST00000497055 PTCD2Q8WV60 388 aaKnown RBP8.25□□□□□ -1.09
SGIP1-214ENST00000497055 EMILIN3Q9NT22 766 aa8.25□□□□□ -1.09
SGIP1-214ENST00000497055 RIMBP2O15034 1052 aa8.24□□□□□ -1.09
SGIP1-214ENST00000497055 TBC1D12O60347 775 aa8.24□□□□□ -1.09
SGIP1-214ENST00000497055 ZNF710Q8N1W2 664 aa8.24□□□□□ -1.09
SGIP1-214ENST00000497055 OXER1Q8TDS5 423 aa8.24□□□□□ -1.09
SGIP1-214ENST00000497055 SETD1BQ9UPS6 1966 aaKnown RBP8.23□□□□□ -1.09
SGIP1-214ENST00000497055 KCNV2Q8TDN2 545 aa8.23□□□□□ -1.09
SGIP1-214ENST00000497055 ARHGEF1Q92888 912 aaKnown RBP8.23□□□□□ -1.09
SGIP1-214ENST00000497055 ZSWIM6Q9HCJ5 1215 aa8.23□□□□□ -1.09
SGIP1-214ENST00000497055 ARIH1Q9Y4X5 557 aaPredicted RBP8.23□□□□□ -1.09
SGIP1-214ENST00000497055 NEO1Q92859 1461 aa8.22□□□□□ -1.09
SGIP1-214ENST00000497055 MAP3K9P80192 1104 aa8.22□□□□□ -1.09
SGIP1-214ENST00000497055 ARHGEF12Q9NZN5 1544 aa8.22□□□□□ -1.09
SGIP1-214ENST00000497055 DISP1Q96F81 1524 aa8.21□□□□□ -1.1
SGIP1-214ENST00000497055 PCDHGA4Q9Y5G9 962 aa8.21□□□□□ -1.1
SGIP1-214ENST00000497055 CAMSAP1Q5T5Y3 1602 aa8.21□□□□□ -1.1
SGIP1-214ENST00000497055 ZFYVE16Q7Z3T8 1539 aa8.2□□□□□ -1.1
SGIP1-214ENST00000497055 FAM163AQ96GL9 167 aaPredicted RBP8.2□□□□□ -1.1
SGIP1-214ENST00000497055 DENND4BO75064 1496 aaPredicted RBP8.19□□□□□ -1.1
SGIP1-214ENST00000497055 DPYSL4O14531 572 aa8.19□□□□□ -1.1
SGIP1-214ENST00000497055 ARSIQ5FYB1 569 aa8.19□□□□□ -1.1
SGIP1-214ENST00000497055 GPR153Q6NV75 609 aa8.19□□□□□ -1.1
SGIP1-214ENST00000497055 PTPRKQ15262 1439 aa8.19□□□□□ -1.1
SGIP1-214ENST00000497055 TRIM52Q96A61 297 aa8.18□□□□□ -1.1
SGIP1-214ENST00000497055 IQGAP2Q13576 1575 aa8.18□□□□□ -1.1
SGIP1-214ENST00000497055 ARID3CA6NKF2 412 aa8.17□□□□□ -1.1
SGIP1-214ENST00000497055 ST18O60284 1047 aa8.17□□□□□ -1.1
SGIP1-214ENST00000497055 HOXB1P14653 301 aaPredicted RBP8.17□□□□□ -1.1
SGIP1-214ENST00000497055 RBM33Q96EV2 1170 aaKnown RBP8.17□□□□□ -1.1
SGIP1-214ENST00000497055 EFCAB5A4FU69 1503 aa8.17□□□□□ -1.1
SGIP1-214ENST00000497055 SPDYE16A6NNV3 312 aaPredicted RBP8.16□□□□□ -1.1
SGIP1-214ENST00000497055 FHOD3Q2V2M9 1422 aa8.16□□□□□ -1.1
SGIP1-214ENST00000497055 ALKQ9UM73 1620 aa8.16□□□□□ -1.1
SGIP1-214ENST00000497055 RICTORQ6R327 1708 aa8.15□□□□□ -1.1
SGIP1-214ENST00000497055 ABCA9Q8IUA7 1624 aa8.15□□□□□ -1.1
SGIP1-214ENST00000497055 TRAPPC8Q9Y2L5 1435 aa8.15□□□□□ -1.1
SGIP1-214ENST00000497055 EVI5O60447 810 aa8.15□□□□□ -1.1
SGIP1-214ENST00000497055 KHSRPQ92945 711 aaKnown RBP eCLIP8.15□□□□□ -1.1
SGIP1-214ENST00000497055 BIVM-ERCC5R4GMW8 1640 aa8.14□□□□□ -1.11
SGIP1-214ENST00000497055 NUDT7P0C024 238 aa8.14□□□□□ -1.11
SGIP1-214ENST00000497055 PDIA6Q15084 440 aa8.14□□□□□ -1.11
SGIP1-214ENST00000497055 ANO8Q9HCE9 1232 aaPredicted RBP8.14□□□□□ -1.11
SGIP1-214ENST00000497055 CPS1P31327 1500 aa8.13□□□□□ -1.11
SGIP1-214ENST00000497055 ZMYM4Q5VZL5 1548 aa8.13□□□□□ -1.11
SGIP1-214ENST00000497055 IGF1RP08069 1367 aa8.12□□□□□ -1.11
SGIP1-214ENST00000497055 C3P01024 1663 aa8.12□□□□□ -1.11
SGIP1-214ENST00000497055 ZNF316A6NFI3 1004 aaPredicted RBP8.12□□□□□ -1.11
SGIP1-214ENST00000497055 ESF1Q9H501 851 aaKnown RBP8.12□□□□□ -1.11
SGIP1-214ENST00000497055 MAGI2Q86UL8 1455 aa8.11□□□□□ -1.11
SGIP1-214ENST00000497055 C9orf84Q5VXU9 1444 aa8.11□□□□□ -1.11
SGIP1-214ENST00000497055 SETBP1Q9Y6X0 1596 aa8.1□□□□□ -1.11
SGIP1-214ENST00000497055 PTGER2P43116 358 aa8.1□□□□□ -1.11
SGIP1-214ENST00000497055 LCE2DQ5TA82 110 aaPredicted RBP8.1□□□□□ -1.11
SGIP1-214ENST00000497055 ATP10AO60312 1499 aa8.1□□□□□ -1.11
SGIP1-214ENST00000497055 SHANK2Q9UPX8 1470 aa8.1□□□□□ -1.11
SGIP1-214ENST00000497055 NBR1Q14596 966 aa8.09□□□□□ -1.11
SGIP1-214ENST00000497055 MARVELD3Q96A59 401 aa8.09□□□□□ -1.11
SGIP1-214ENST00000497055 HECW1Q76N89 1606 aa8.09□□□□□ -1.11
SGIP1-214ENST00000497055 ABCA8O94911 1581 aa8.09□□□□□ -1.11
SGIP1-214ENST00000497055 PLA2R1Q13018 1463 aa8.08□□□□□ -1.12
SGIP1-214ENST00000497055 TCOF1Q13428 1488 aaKnown RBP8.08□□□□□ -1.12
SGIP1-214ENST00000497055 SEMA3EO15041 775 aa8.08□□□□□ -1.12
SGIP1-214ENST00000497055 EMP3P54852 163 aa8.08□□□□□ -1.12
SGIP1-214ENST00000497055 LHX6Q9UPM6 363 aa8.08□□□□□ -1.12
SGIP1-214ENST00000497055 UGGT2Q9NYU1 1516 aa8.07□□□□□ -1.12
SGIP1-214ENST00000497055 RAPGEF2Q9Y4G8 1499 aa8.06□□□□□ -1.12
SGIP1-214ENST00000497055 ERBB3P21860 1342 aa8.06□□□□□ -1.12
SGIP1-214ENST00000497055 PSDA5PKW4 1024 aaPredicted RBP8.06□□□□□ -1.12
SGIP1-214ENST00000497055 BCANQ96GW7 911 aa8.06□□□□□ -1.12
SGIP1-214ENST00000497055 LRRC7Q96NW7 1537 aa8.06□□□□□ -1.12
SGIP1-214ENST00000497055 CARMIL1Q5VZK9 1371 aa8.06□□□□□ -1.12
SGIP1-214ENST00000497055 TESPA1A2RU30 521 aaPredicted RBP8.05□□□□□ -1.12
SGIP1-214ENST00000497055 DDX12PQ92771 950 aa8.05□□□□□ -1.12
SGIP1-214ENST00000497055 FAM205CA6NFA0 338 aa8.04□□□□□ -1.12
SGIP1-214ENST00000497055 GRXCR2A6NFK2 248 aa8.04□□□□□ -1.12
SGIP1-214ENST00000497055 PHF14O94880 888 aa8.04□□□□□ -1.12
SGIP1-214ENST00000497055 MLLT3P42568 568 aaPredicted RBP8.04□□□□□ -1.12
SGIP1-214ENST00000497055 FOSBP53539 338 aa8.04□□□□□ -1.12
SGIP1-214ENST00000497055 SMYD5Q6GMV2 418 aa8.04□□□□□ -1.12
SGIP1-214ENST00000497055 ATP10BO94823 1461 aa8.04□□□□□ -1.12
SGIP1-214ENST00000497055 YY1P25490 414 aa8.03□□□□□ -1.12
SGIP1-214ENST00000497055 RXRBP28702 533 aa8.03□□□□□ -1.12
SGIP1-214ENST00000497055 ZNF454Q8N9F8 522 aa8.03□□□□□ -1.12
SGIP1-214ENST00000497055 PCDHGA10Q9Y5H3 936 aa8.03□□□□□ -1.12
SGIP1-214ENST00000497055 SUPT6HQ7KZ85 1726 aaKnown RBP8.03□□□□□ -1.12
SGIP1-214ENST00000497055 SENP3-EIF4A1A0A087X0R7 540 aa8.02□□□□□ -1.13
SGIP1-214ENST00000497055 VARS2Q5ST30 1063 aaKnown RBP8.02□□□□□ -1.13
SGIP1-214ENST00000497055 ZNF772Q68DY9 489 aaPredicted RBP8.02□□□□□ -1.13
SGIP1-214ENST00000497055 EPAS1Q99814 870 aa8.02□□□□□ -1.13
SGIP1-214ENST00000497055 MYT1LQ9UL68 1186 aa8.02□□□□□ -1.13
SGIP1-214ENST00000497055 NPATQ14207 1427 aa8.02□□□□□ -1.13
SGIP1-214ENST00000497055 CFAP74Q9C0B2 1584 aa8.01□□□□□ -1.13
SGIP1-214ENST00000497055 RNF17Q9BXT8 1623 aaKnown RBP8.01□□□□□ -1.13
SGIP1-214ENST00000497055 PPP4R3BQ5MIZ7 849 aa8.01□□□□□ -1.13
SGIP1-214ENST00000497055 TYW1BQ6NUM6 668 aa8.01□□□□□ -1.13
SGIP1-214ENST00000497055 FBXW7Q969H0 707 aa8.01□□□□□ -1.13
SGIP1-214ENST00000497055 KIF27Q86VH2 1401 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms