RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 ASXL2Q76L83 1435 aa9.65□□□□□ -0.86
SIK3-213ENST00000497049 SPDYE16A6NNV3 312 aaPredicted RBP9.65□□□□□ -0.86
SIK3-213ENST00000497049 KDM2AQ9Y2K7 1162 aa9.65□□□□□ -0.86
SIK3-213ENST00000497049 UPF1Q92900 1129 aaKnown RBP eCLIP9.64□□□□□ -0.87
SIK3-213ENST00000497049 EMILIN3Q9NT22 766 aa9.64□□□□□ -0.87
SIK3-213ENST00000497049 ARSIQ5FYB1 569 aa9.63□□□□□ -0.87
SIK3-213ENST00000497049 ZCCHC11Q5TAX3 1644 aaKnown RBP9.63□□□□□ -0.87
SIK3-213ENST00000497049 MAGI3Q5TCQ9 1506 aa9.62□□□□□ -0.87
SIK3-213ENST00000497049 WDR7Q9Y4E6 1490 aa9.62□□□□□ -0.87
SIK3-213ENST00000497049 MYT1Q01538 1121 aa9.62□□□□□ -0.87
SIK3-213ENST00000497049 LRRIQ1Q96JM4 1722 aa9.62□□□□□ -0.87
SIK3-213ENST00000497049 MAPKBP1O60336 1514 aa9.61□□□□□ -0.87
SIK3-213ENST00000497049 EMP3P54852 163 aa9.61□□□□□ -0.87
SIK3-213ENST00000497049 FAM69CQ0P6D2 419 aa9.61□□□□□ -0.87
SIK3-213ENST00000497049 KCNV2Q8TDN2 545 aa9.61□□□□□ -0.87
SIK3-213ENST00000497049 CFDP1Q9UEE9 299 aaPredicted RBP9.61□□□□□ -0.87
SIK3-213ENST00000497049 CCNB3Q8WWL7 1395 aa9.61□□□□□ -0.87
SIK3-213ENST00000497049 DPYSL4O14531 572 aa9.6□□□□□ -0.87
SIK3-213ENST00000497049 EVI5O60447 810 aa9.6□□□□□ -0.87
SIK3-213ENST00000497049 TRIM26Q12899 539 aaPredicted RBP9.6□□□□□ -0.87
SIK3-213ENST00000497049 PDIA6Q15084 440 aa9.6□□□□□ -0.87
SIK3-213ENST00000497049 EFCAB2Q5VUJ9 269 aa9.6□□□□□ -0.87
SIK3-213ENST00000497049 EHBP1L1Q8N3D4 1523 aa9.6□□□□□ -0.87
SIK3-213ENST00000497049 NCOA2Q15596 1464 aa9.59□□□□□ -0.87
SIK3-213ENST00000497049 CFAP43Q8NDM7 1665 aa9.59□□□□□ -0.87
SIK3-213ENST00000497049 RSPH4AQ5TD94 716 aa9.59□□□□□ -0.87
SIK3-213ENST00000497049 PHLDB1Q86UU1 1377 aa9.59□□□□□ -0.87
SIK3-213ENST00000497049 ABCC10Q5T3U5 1492 aa9.59□□□□□ -0.87
SIK3-213ENST00000497049 PLCH2O75038 1416 aa9.58□□□□□ -0.88
SIK3-213ENST00000497049 MIA2Q96PC5 1412 aa9.58□□□□□ -0.88
SIK3-213ENST00000497049 GPATCH8Q9UKJ3 1502 aaKnown RBP9.58□□□□□ -0.88
SIK3-213ENST00000497049 NUDT7P0C024 238 aa9.58□□□□□ -0.88
SIK3-213ENST00000497049 ANO8Q9HCE9 1232 aaPredicted RBP9.58□□□□□ -0.88
SIK3-213ENST00000497049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.58□□□□□ -0.88
SIK3-213ENST00000497049 KDM4FA0A1W2PPD8 638 aa9.57□□□□□ -0.88
SIK3-213ENST00000497049 ERBB3P21860 1342 aa9.56□□□□□ -0.88
SIK3-213ENST00000497049 MYOM3Q5VTT5 1437 aa9.56□□□□□ -0.88
SIK3-213ENST00000497049 CD109Q6YHK3 1445 aa9.56□□□□□ -0.88
SIK3-213ENST00000497049 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.56□□□□□ -0.88
SIK3-213ENST00000497049 GLI2P10070 1586 aa9.55□□□□□ -0.88
SIK3-213ENST00000497049 SUPT6HQ7KZ85 1726 aaKnown RBP9.55□□□□□ -0.88
SIK3-213ENST00000497049 RRBP1Q9P2E9 1410 aaKnown RBP9.55□□□□□ -0.88
SIK3-213ENST00000497049 PTGER2P43116 358 aa9.54□□□□□ -0.88
SIK3-213ENST00000497049 ZNF777Q9ULD5 760 aaPredicted RBP9.54□□□□□ -0.88
SIK3-213ENST00000497049 ZNF644Q9H582 1327 aaPredicted RBP9.54□□□□□ -0.88
SIK3-213ENST00000497049 KIF14Q15058 1648 aa9.53□□□□□ -0.88
SIK3-213ENST00000497049 FAM50AQ14320 339 aaKnown RBP9.53□□□□□ -0.88
SIK3-213ENST00000497049 PPP4R3BQ5MIZ7 849 aa9.53□□□□□ -0.88
SIK3-213ENST00000497049 KHSRPQ92945 711 aaKnown RBP eCLIP9.53□□□□□ -0.88
SIK3-213ENST00000497049 MARVELD3Q96A59 401 aa9.53□□□□□ -0.88
SIK3-213ENST00000497049 FGD6Q6ZV73 1430 aa9.53□□□□□ -0.88
SIK3-213ENST00000497049 LHX6Q9UPM6 363 aa9.52□□□□□ -0.89
SIK3-213ENST00000497049 KIAA1107Q9UPP5 1409 aa9.52□□□□□ -0.89
SIK3-213ENST00000497049 ABCA9Q8IUA7 1624 aa9.52□□□□□ -0.89
SIK3-213ENST00000497049 ARAP3Q8WWN8 1544 aa9.51□□□□□ -0.89
SIK3-213ENST00000497049 PHF14O94880 888 aa9.51□□□□□ -0.89
SIK3-213ENST00000497049 HNRNPMP52272 730 aaKnown RBP eCLIP9.51□□□□□ -0.89
SIK3-213ENST00000497049 FBXW7Q969H0 707 aa9.51□□□□□ -0.89
SIK3-213ENST00000497049 EPAS1Q99814 870 aa9.51□□□□□ -0.89
SIK3-213ENST00000497049 FAM205CA6NFA0 338 aa9.5□□□□□ -0.89
SIK3-213ENST00000497049 TULP1O00294 542 aaPredicted RBP9.5□□□□□ -0.89
SIK3-213ENST00000497049 TSPY4P0CV99 314 aa9.5□□□□□ -0.89
SIK3-213ENST00000497049 TSPY10P0CW01 314 aa9.5□□□□□ -0.89
SIK3-213ENST00000497049 SMYD5Q6GMV2 418 aa9.5□□□□□ -0.89
SIK3-213ENST00000497049 CDAN1Q8IWY9 1227 aa9.5□□□□□ -0.89
SIK3-213ENST00000497049 TCOF1Q13428 1488 aaKnown RBP9.5□□□□□ -0.89
SIK3-213ENST00000497049 PLEKHH2Q8IVE3 1493 aa9.49□□□□□ -0.89
SIK3-213ENST00000497049 VARS2Q5ST30 1063 aaKnown RBP9.49□□□□□ -0.89
SIK3-213ENST00000497049 AKNAQ7Z591 1439 aa9.48□□□□□ -0.89
SIK3-213ENST00000497049 PBX2P40425 430 aa9.48□□□□□ -0.89
SIK3-213ENST00000497049 FOSBP53539 338 aa9.48□□□□□ -0.89
SIK3-213ENST00000497049 NBR1Q14596 966 aa9.48□□□□□ -0.89
SIK3-213ENST00000497049 HS3ST6Q96QI5 342 aa9.48□□□□□ -0.89
SIK3-213ENST00000497049 DIP2BQ9P265 1576 aa9.48□□□□□ -0.89
SIK3-213ENST00000497049 FANCAO15360 1455 aa9.47□□□□□ -0.89
SIK3-213ENST00000497049 NEO1Q92859 1461 aa9.47□□□□□ -0.89
SIK3-213ENST00000497049 MBD5Q9P267 1494 aa9.47□□□□□ -0.89
SIK3-213ENST00000497049 TTC37Q6PGP7 1564 aa9.47□□□□□ -0.89
SIK3-213ENST00000497049 TYW1BQ6NUM6 668 aa9.47□□□□□ -0.89
SIK3-213ENST00000497049 AFAP1Q8N556 730 aa9.47□□□□□ -0.89
SIK3-213ENST00000497049 ZNF454Q8N9F8 522 aa9.47□□□□□ -0.89
SIK3-213ENST00000497049 PCGF6Q9BYE7 350 aa9.47□□□□□ -0.89
SIK3-213ENST00000497049 ARHGAP5Q13017 1502 aa9.46□□□□□ -0.89
SIK3-213ENST00000497049 ZNF687Q8N1G0 1237 aa9.46□□□□□ -0.9
SIK3-213ENST00000497049 ZDHHC16Q969W1 377 aa9.46□□□□□ -0.9
SIK3-213ENST00000497049 SCAPERQ9BY12 1400 aa9.46□□□□□ -0.9
SIK3-213ENST00000497049 TEX14Q8IWB6 1497 aa9.46□□□□□ -0.9
SIK3-213ENST00000497049 MAP3K4Q9Y6R4 1608 aa9.45□□□□□ -0.9
SIK3-213ENST00000497049 CDC42BPAQ5VT25 1732 aa9.45□□□□□ -0.9
SIK3-213ENST00000497049 CDC42BPBQ9Y5S2 1711 aa9.45□□□□□ -0.9
SIK3-213ENST00000497049 ITGAEP38570 1179 aa9.45□□□□□ -0.9
SIK3-213ENST00000497049 ABCC5O15440 1437 aa9.45□□□□□ -0.9
SIK3-213ENST00000497049 PTPN23Q9H3S7 1636 aa9.45□□□□□ -0.9
SIK3-213ENST00000497049 CAMSAP2Q08AD1 1489 aa9.44□□□□□ -0.9
SIK3-213ENST00000497049 PREX2Q70Z35 1606 aa9.44□□□□□ -0.9
SIK3-213ENST00000497049 ITSN2Q9NZM3 1697 aa9.44□□□□□ -0.9
SIK3-213ENST00000497049 MYO5CQ9NQX4 1742 aa9.43□□□□□ -0.9
SIK3-213ENST00000497049 ARHGEF12Q9NZN5 1544 aa9.43□□□□□ -0.9
SIK3-213ENST00000497049 PTPRKQ15262 1439 aa9.43□□□□□ -0.9
SIK3-213ENST00000497049 RAPGEF3O95398 923 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms