RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 SCAF11Q99590 1463 aaKnown RBP21.14■□□□□ 0.98
COL15A1-204ENST00000496686 PPLO60437 1756 aa21.13■□□□□ 0.97
COL15A1-204ENST00000496686 SPATA31D1Q6ZQQ2 1576 aa21.1■□□□□ 0.97
COL15A1-204ENST00000496686 SETBP1Q9Y6X0 1596 aa21.1■□□□□ 0.97
COL15A1-204ENST00000496686 CLTCQ00610 1675 aaKnown RBP21.1■□□□□ 0.97
COL15A1-204ENST00000496686 ZFYVE9O95405 1425 aa21.1■□□□□ 0.97
COL15A1-204ENST00000496686 EIF3AQ14152 1382 aaKnown RBP21.1■□□□□ 0.97
COL15A1-204ENST00000496686 ADGRF5Q8IZF2 1346 aa21.09■□□□□ 0.97
COL15A1-204ENST00000496686 PIK3C2GO75747 1445 aa21.09■□□□□ 0.97
COL15A1-204ENST00000496686 CHGAP10645 457 aaKnown RBP21.08■□□□□ 0.97
COL15A1-204ENST00000496686 NEXMIFQ5QGS0 1516 aa21.08■□□□□ 0.96
COL15A1-204ENST00000496686 TESK2Q96S53 571 aa21.07■□□□□ 0.96
COL15A1-204ENST00000496686 IDI1Q13907 227 aa21.06■□□□□ 0.96
COL15A1-204ENST00000496686 TMEM131LA2VDJ0 1609 aa21.06■□□□□ 0.96
COL15A1-204ENST00000496686 SLC24A1O60721 1099 aa21.05■□□□□ 0.96
COL15A1-204ENST00000496686 CFAP65Q6ZU64 1925 aaKnown RBP21.05■□□□□ 0.96
COL15A1-204ENST00000496686 VGFO15240 615 aaPredicted RBP21.03■□□□□ 0.96
COL15A1-204ENST00000496686 TMF1P82094 1093 aa21.03■□□□□ 0.96
COL15A1-204ENST00000496686 DNAJC5Q9H3Z4 198 aa21.03■□□□□ 0.96
COL15A1-204ENST00000496686 YTHDC1Q96MU7 727 aaKnown RBP21.02■□□□□ 0.96
COL15A1-204ENST00000496686 C14orf93Q9H972 538 aaKnown RBP21.02■□□□□ 0.96
COL15A1-204ENST00000496686 CFAP70Q5T0N1 1121 aa21.01■□□□□ 0.95
COL15A1-204ENST00000496686 ESF1Q9H501 851 aaKnown RBP21.01■□□□□ 0.95
COL15A1-204ENST00000496686 TRHP20396 242 aaPredicted RBP21■□□□□ 0.95
COL15A1-204ENST00000496686 MYO3AQ8NEV4 1616 aa21■□□□□ 0.95
COL15A1-204ENST00000496686 ADGRB1O14514 1584 aa20.99■□□□□ 0.95
COL15A1-204ENST00000496686 CDCA8Q53HL2 280 aa20.99■□□□□ 0.95
COL15A1-204ENST00000496686 FBXO31Q5XUX0 539 aaPredicted RBP20.99■□□□□ 0.95
COL15A1-204ENST00000496686 PRKRIP1Q9H875 184 aaPredicted RBP20.99■□□□□ 0.95
COL15A1-204ENST00000496686 ZMYM3Q14202 1370 aa20.98■□□□□ 0.95
COL15A1-204ENST00000496686 DISP3Q9P2K9 1392 aa20.98■□□□□ 0.95
COL15A1-204ENST00000496686 MLECQ14165 292 aa20.98■□□□□ 0.95
COL15A1-204ENST00000496686 SBNO2Q9Y2G9 1366 aa20.97■□□□□ 0.95
COL15A1-204ENST00000496686 POLR3GLQ9BT43 218 aa20.96■□□□□ 0.95
COL15A1-204ENST00000496686 KTN1Q86UP2 1357 aaKnown RBP20.96■□□□□ 0.95
COL15A1-204ENST00000496686 A2ML1A8K2U0 1454 aa20.94■□□□□ 0.94
COL15A1-204ENST00000496686 KDM5AP29375 1690 aaKnown RBP20.92■□□□□ 0.94
COL15A1-204ENST00000496686 TNRQ92752 1358 aa20.91■□□□□ 0.94
COL15A1-204ENST00000496686 MYO5BQ9ULV0 1848 aa20.91■□□□□ 0.94
COL15A1-204ENST00000496686 STAG3Q9UJ98 1225 aa20.89■□□□□ 0.93
COL15A1-204ENST00000496686 CENPJQ9HC77 1338 aaPredicted RBP20.87■□□□□ 0.93
COL15A1-204ENST00000496686 RIMS2Q9UQ26 1411 aa20.87■□□□□ 0.93
COL15A1-204ENST00000496686 NLRP1Q9C000 1473 aa20.86■□□□□ 0.93
COL15A1-204ENST00000496686 RALBP1Q15311 655 aa20.85■□□□□ 0.93
COL15A1-204ENST00000496686 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.85■□□□□ 0.93
COL15A1-204ENST00000496686 ASXL1Q8IXJ9 1541 aa20.84■□□□□ 0.93
COL15A1-204ENST00000496686 PER1O15534 1290 aaPredicted RBP20.82■□□□□ 0.92
COL15A1-204ENST00000496686 ALKQ9UM73 1620 aa20.82■□□□□ 0.92
COL15A1-204ENST00000496686 QRICH2Q9H0J4 1663 aa20.81■□□□□ 0.92
COL15A1-204ENST00000496686 HDGFP51858 240 aaKnown RBP20.81■□□□□ 0.92
COL15A1-204ENST00000496686 PUS7Q96PZ0 661 aaKnown RBP20.81■□□□□ 0.92
COL15A1-204ENST00000496686 ARHGEF28Q8N1W1 1705 aaKnown RBP20.81■□□□□ 0.92
COL15A1-204ENST00000496686 FER1L4A9Z1Z3 1794 aa20.8■□□□□ 0.92
COL15A1-204ENST00000496686 NUTM2DQ5VT03 806 aaPredicted RBP20.8■□□□□ 0.92
COL15A1-204ENST00000496686 TRAK1Q9UPV9 953 aa20.8■□□□□ 0.92
COL15A1-204ENST00000496686 TMEM132EQ6IEE7 984 aa20.79■□□□□ 0.92
COL15A1-204ENST00000496686 PANK3Q9H999 370 aa20.79■□□□□ 0.92
COL15A1-204ENST00000496686 PARD3Q8TEW0 1356 aa20.79■□□□□ 0.92
COL15A1-204ENST00000496686 MYOM1P52179 1685 aa20.78■□□□□ 0.92
COL15A1-204ENST00000496686 MRS2Q9HD23 443 aa20.78■□□□□ 0.92
COL15A1-204ENST00000496686 C3P01024 1663 aa20.77■□□□□ 0.92
COL15A1-204ENST00000496686 UBR1Q8IWV7 1749 aa20.77■□□□□ 0.92
COL15A1-204ENST00000496686 YTHDC2Q9H6S0 1430 aaKnown RBP20.77■□□□□ 0.91
COL15A1-204ENST00000496686 MYBBP1AQ9BQG0 1328 aaKnown RBP20.77■□□□□ 0.91
COL15A1-204ENST00000496686 NPC1L1Q9UHC9 1359 aa20.76■□□□□ 0.91
COL15A1-204ENST00000496686 DLC1Q96QB1 1528 aa20.76■□□□□ 0.91
COL15A1-204ENST00000496686 BRD4O60885 1362 aaPredicted RBP20.75■□□□□ 0.91
COL15A1-204ENST00000496686 TMEM2Q9UHN6 1383 aa20.75■□□□□ 0.91
COL15A1-204ENST00000496686 PTPRMP28827 1452 aa20.74■□□□□ 0.91
COL15A1-204ENST00000496686 SETD1AO15047 1707 aaKnown RBP20.73■□□□□ 0.91
COL15A1-204ENST00000496686 LRPPRCP42704 1394 aaKnown RBP20.72■□□□□ 0.91
COL15A1-204ENST00000496686 CCDC184Q52MB2 194 aa20.72■□□□□ 0.91
COL15A1-204ENST00000496686 NRXN3Q9Y4C0 1643 aa20.71■□□□□ 0.91
COL15A1-204ENST00000496686 EVC2Q86UK5 1308 aa20.71■□□□□ 0.91
COL15A1-204ENST00000496686 TULP4Q9NRJ4 1543 aa20.7■□□□□ 0.9
COL15A1-204ENST00000496686 KNSTRNQ9Y448 316 aa20.7■□□□□ 0.9
COL15A1-204ENST00000496686 NLRP13Q86W25 1043 aa20.69■□□□□ 0.9
COL15A1-204ENST00000496686 ABCC11Q96J66 1382 aa20.69■□□□□ 0.9
COL15A1-204ENST00000496686 ARHGAP23Q9P227 1491 aa20.69■□□□□ 0.9
COL15A1-204ENST00000496686 SLIT1O75093 1534 aa20.68■□□□□ 0.9
COL15A1-204ENST00000496686 NINLQ9Y2I6 1382 aa20.68■□□□□ 0.9
COL15A1-204ENST00000496686 PLEKHG1Q9ULL1 1385 aa20.67■□□□□ 0.9
COL15A1-204ENST00000496686 AMER1Q5JTC6 1135 aaPredicted RBP20.66■□□□□ 0.9
COL15A1-204ENST00000496686 TECPR2O15040 1411 aa20.65■□□□□ 0.9
COL15A1-204ENST00000496686 SCAF1Q9H7N4 1312 aaKnown RBP20.65■□□□□ 0.9
COL15A1-204ENST00000496686 CEBPAP49715 358 aaPredicted RBP20.65■□□□□ 0.9
COL15A1-204ENST00000496686 TMC1Q8TDI8 760 aa20.65■□□□□ 0.9
COL15A1-204ENST00000496686 SIRT1Q96EB6 747 aa20.65■□□□□ 0.9
COL15A1-204ENST00000496686 KNDC1Q76NI1 1749 aa20.64■□□□□ 0.9
COL15A1-204ENST00000496686 ADAMTSL3P82987 1691 aa20.64■□□□□ 0.9
COL15A1-204ENST00000496686 STK26Q9P289 416 aa20.64■□□□□ 0.89
COL15A1-204ENST00000496686 HNRNPUQ00839 825 aaKnown RBP eCLIP20.62■□□□□ 0.89
COL15A1-204ENST00000496686 PNISRQ8TF01 805 aaKnown RBP20.62■□□□□ 0.89
COL15A1-204ENST00000496686 PRAM1Q96QH2 718 aa20.62■□□□□ 0.89
COL15A1-204ENST00000496686 POGKQ9P215 609 aa20.62■□□□□ 0.89
COL15A1-204ENST00000496686 FAM135BQ49AJ0 1406 aa20.61■□□□□ 0.89
COL15A1-204ENST00000496686 INSRP06213 1382 aa20.61■□□□□ 0.89
COL15A1-204ENST00000496686 ATAD2Q6PL18 1390 aa20.61■□□□□ 0.89
COL15A1-204ENST00000496686 USP32Q8NFA0 1604 aa20.61■□□□□ 0.89
COL15A1-204ENST00000496686 CC2D1BQ5T0F9 858 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms