RNA–Protein interactions for RNA: ENST00000496588.1

NDUFB4-206, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 425 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-206ENST00000496588 METTL3Q86U44 580 aaKnown RBP12.63□□□□□ -0.39
NDUFB4-206ENST00000496588 SLC24A1O60721 1099 aa12.62□□□□□ -0.39
NDUFB4-206ENST00000496588 FECHP22830 423 aa12.61□□□□□ -0.39
NDUFB4-206ENST00000496588 RSPH4AQ5TD94 716 aa12.61□□□□□ -0.39
NDUFB4-206ENST00000496588 LMOD2Q6P5Q4 547 aa12.6□□□□□ -0.39
NDUFB4-206ENST00000496588 KCNC4Q03721 635 aa12.59□□□□□ -0.39
NDUFB4-206ENST00000496588 MAP2K5Q13163 448 aa12.58□□□□□ -0.4
NDUFB4-206ENST00000496588 MINK1Q8N4C8 1332 aaPredicted RBP12.56□□□□□ -0.4
NDUFB4-206ENST00000496588 KMT5BQ4FZB7 885 aa12.54□□□□□ -0.4
NDUFB4-206ENST00000496588 APLP1P51693 650 aa12.53□□□□□ -0.4
NDUFB4-206ENST00000496588 DAXXQ9UER7 740 aaPredicted RBP12.53□□□□□ -0.4
NDUFB4-206ENST00000496588 IL21Q9HBE4 155 aa12.52□□□□□ -0.41
NDUFB4-206ENST00000496588 IRF6O14896 467 aa12.51□□□□□ -0.41
NDUFB4-206ENST00000496588 SULF1Q8IWU6 871 aa12.51□□□□□ -0.41
NDUFB4-206ENST00000496588 MTRQ99707 1265 aa12.5□□□□□ -0.41
NDUFB4-206ENST00000496588 A0A0G2JS52 829 aa12.49□□□□□ -0.41
NDUFB4-206ENST00000496588 TJAP1Q5JTD0 557 aa12.49□□□□□ -0.41
NDUFB4-206ENST00000496588 CFHP08603 1231 aa12.48□□□□□ -0.41
NDUFB4-206ENST00000496588 PCDHB3Q9Y5E6 796 aa12.48□□□□□ -0.41
NDUFB4-206ENST00000496588 RGS20O76081 388 aa12.47□□□□□ -0.41
NDUFB4-206ENST00000496588 ACTN4O43707 911 aaKnown RBP12.46□□□□□ -0.41
NDUFB4-206ENST00000496588 KRI1Q8N9T8 703 aaKnown RBP12.46□□□□□ -0.41
NDUFB4-206ENST00000496588 RDH13Q8NBN7 331 aa12.46□□□□□ -0.41
NDUFB4-206ENST00000496588 DDX11L8A8MPP1 907 aa12.44□□□□□ -0.42
NDUFB4-206ENST00000496588 SLC10A3P09131 477 aa12.44□□□□□ -0.42
NDUFB4-206ENST00000496588 CCDC102AQ96A19 550 aa12.44□□□□□ -0.42
NDUFB4-206ENST00000496588 ZC3H15Q8WU90 426 aaKnown RBP12.43□□□□□ -0.42
NDUFB4-206ENST00000496588 BCANQ96GW7 911 aa12.43□□□□□ -0.42
NDUFB4-206ENST00000496588 PHOX2BQ99453 314 aa12.43□□□□□ -0.42
NDUFB4-206ENST00000496588 ZMYND10O75800 440 aa12.42□□□□□ -0.42
NDUFB4-206ENST00000496588 COPS2P61201 443 aa12.42□□□□□ -0.42
NDUFB4-206ENST00000496588 BARGINQ6ZT62 677 aa12.42□□□□□ -0.42
NDUFB4-206ENST00000496588 NLRP7Q8WX94 980 aa12.41□□□□□ -0.42
NDUFB4-206ENST00000496588 ZPR1O75312 459 aa12.39□□□□□ -0.43
NDUFB4-206ENST00000496588 NR1I2O75469 434 aa12.38□□□□□ -0.43
NDUFB4-206ENST00000496588 CLCN1P35523 988 aa12.38□□□□□ -0.43
NDUFB4-206ENST00000496588 BLOC1S3Q6QNY0 202 aa12.38□□□□□ -0.43
NDUFB4-206ENST00000496588 ZNF516Q92618 1163 aa12.38□□□□□ -0.43
NDUFB4-206ENST00000496588 GGCXP38435 758 aa12.37□□□□□ -0.43
NDUFB4-206ENST00000496588 MDM2Q00987 491 aaPredicted RBP12.36□□□□□ -0.43
NDUFB4-206ENST00000496588 GPCPD1Q9NPB8 672 aa12.36□□□□□ -0.43
NDUFB4-206ENST00000496588 GCGRP47871 477 aa12.35□□□□□ -0.43
NDUFB4-206ENST00000496588 GRIPAP1Q4V328 841 aa12.35□□□□□ -0.43
NDUFB4-206ENST00000496588 ATP6V1AP38606 617 aa12.32□□□□□ -0.44
NDUFB4-206ENST00000496588 CD46P15529 392 aa12.3□□□□□ -0.44
NDUFB4-206ENST00000496588 TMUB1Q9BVT8 246 aa12.3□□□□□ -0.44
NDUFB4-206ENST00000496588 FUT2Q10981 343 aa12.29□□□□□ -0.44
NDUFB4-206ENST00000496588 PPP1R18Q6NYC8 613 aa12.29□□□□□ -0.44
NDUFB4-206ENST00000496588 NKX2-3Q8TAU0 364 aa12.29□□□□□ -0.44
NDUFB4-206ENST00000496588 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.29□□□□□ -0.44
NDUFB4-206ENST00000496588 TTLL12Q14166 644 aaPredicted RBP12.28□□□□□ -0.44
NDUFB4-206ENST00000496588 SCUBE3Q8IX30 993 aa12.28□□□□□ -0.44
NDUFB4-206ENST00000496588 AK7Q96M32 723 aa12.28□□□□□ -0.44
NDUFB4-206ENST00000496588 AMHR2Q16671 573 aa12.27□□□□□ -0.45
NDUFB4-206ENST00000496588 PUS10Q3MIT2 529 aaKnown RBP12.27□□□□□ -0.45
NDUFB4-206ENST00000496588 FAM217BQ9NTX9 383 aaPredicted RBP12.27□□□□□ -0.45
NDUFB4-206ENST00000496588 ADH1BP00325 375 aa12.26□□□□□ -0.45
NDUFB4-206ENST00000496588 USP46P62068 366 aa12.26□□□□□ -0.45
NDUFB4-206ENST00000496588 MORN1Q5T089 497 aa12.26□□□□□ -0.45
NDUFB4-206ENST00000496588 KDM4AO75164 1064 aa12.25□□□□□ -0.45
NDUFB4-206ENST00000496588 TLL1O43897 1013 aa12.23□□□□□ -0.45
NDUFB4-206ENST00000496588 SPSB2Q99619 263 aa12.23□□□□□ -0.45
NDUFB4-206ENST00000496588 SALL2Q9Y467 1007 aaPredicted RBP12.23□□□□□ -0.45
NDUFB4-206ENST00000496588 FMNL1O95466 1100 aaPredicted RBP12.22□□□□□ -0.45
NDUFB4-206ENST00000496588 Q3C1V9 767 aa12.22□□□□□ -0.45
NDUFB4-206ENST00000496588 NUTM1Q86Y26 1132 aa12.21□□□□□ -0.45
NDUFB4-206ENST00000496588 TRIM66O15016 1216 aa12.2□□□□□ -0.46
NDUFB4-206ENST00000496588 SSTR3P32745 418 aaPredicted RBP12.2□□□□□ -0.46
NDUFB4-206ENST00000496588 SLC6A16Q9GZN6 736 aa12.2□□□□□ -0.46
NDUFB4-206ENST00000496588 SLC27A5Q9Y2P5 690 aa12.2□□□□□ -0.46
NDUFB4-206ENST00000496588 V9GY48 417 aaPredicted RBP12.19□□□□□ -0.46
NDUFB4-206ENST00000496588 GIGYF2Q6Y7W6 1299 aaKnown RBP12.18□□□□□ -0.46
NDUFB4-206ENST00000496588 S1PR4O95977 384 aa12.17□□□□□ -0.46
NDUFB4-206ENST00000496588 ANKLE1Q8NAG6 615 aa12.17□□□□□ -0.46
NDUFB4-206ENST00000496588 REPIN1Q9BWE0 567 aaKnown RBP12.17□□□□□ -0.46
NDUFB4-206ENST00000496588 PRKD2Q9BZL6 878 aa12.17□□□□□ -0.46
NDUFB4-206ENST00000496588 RNF223E7ERA6 249 aa12.16□□□□□ -0.46
NDUFB4-206ENST00000496588 THAP11Q96EK4 314 aa12.15□□□□□ -0.46
NDUFB4-206ENST00000496588 IRX2Q9BZI1 471 aaPredicted RBP12.15□□□□□ -0.46
NDUFB4-206ENST00000496588 HOXA2O43364 376 aa12.14□□□□□ -0.47
NDUFB4-206ENST00000496588 DIXDC1Q155Q3 683 aa12.14□□□□□ -0.47
NDUFB4-206ENST00000496588 BRICD5Q6PL45 260 aa12.14□□□□□ -0.47
NDUFB4-206ENST00000496588 SLC24A3Q9HC58 644 aa12.14□□□□□ -0.47
NDUFB4-206ENST00000496588 PARP9Q8IXQ6 854 aa12.13□□□□□ -0.47
NDUFB4-206ENST00000496588 PDE4DQ08499 809 aa12.11□□□□□ -0.47
NDUFB4-206ENST00000496588 MSS51Q4VC12 460 aa12.11□□□□□ -0.47
NDUFB4-206ENST00000496588 BEGAINQ9BUH8 593 aa12.1□□□□□ -0.47
NDUFB4-206ENST00000496588 SLC19A1P41440 591 aa12.08□□□□□ -0.48
NDUFB4-206ENST00000496588 LAPTM4AQ15012 233 aa12.08□□□□□ -0.48
NDUFB4-206ENST00000496588 RNF19BQ6ZMZ0 732 aa12.08□□□□□ -0.48
NDUFB4-206ENST00000496588 USB1Q9BQ65 265 aaKnown RBP12.08□□□□□ -0.48
NDUFB4-206ENST00000496588 FAM160A2Q8N612 972 aaPredicted RBP12.07□□□□□ -0.48
NDUFB4-206ENST00000496588 SPIRE2Q8WWL2 714 aa12.07□□□□□ -0.48
NDUFB4-206ENST00000496588 PPEF1O14829 653 aaPredicted RBP12.06□□□□□ -0.48
NDUFB4-206ENST00000496588 FDX1P10109 184 aa12.06□□□□□ -0.48
NDUFB4-206ENST00000496588 GJA5P36382 358 aa12.03□□□□□ -0.48
NDUFB4-206ENST00000496588 HLA-CQ95604 372 aa12.03□□□□□ -0.48
NDUFB4-206ENST00000496588 MS4A1P11836 297 aa12.02□□□□□ -0.49
NDUFB4-206ENST00000496588 FCF1Q9Y324 198 aaKnown RBP12.02□□□□□ -0.49
NDUFB4-206ENST00000496588 MMP16P51512 607 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms