RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
CLK1-214ENST00000496205 TSHZ2Q9NRE2 1034 aa10.2□□□□□ -0.78
CLK1-214ENST00000496205 TLL1O43897 1013 aa10.19□□□□□ -0.78
CLK1-214ENST00000496205 SLC4A3P48751 1232 aa10.19□□□□□ -0.78
CLK1-214ENST00000496205 FAM161AQ3B820 660 aa10.19□□□□□ -0.78
CLK1-214ENST00000496205 ADGRG1Q9Y653 693 aa10.19□□□□□ -0.78
CLK1-214ENST00000496205 DNAJB2P25686 324 aa10.18□□□□□ -0.78
CLK1-214ENST00000496205 PRR14Q9BWN1 585 aa10.18□□□□□ -0.78
CLK1-214ENST00000496205 TMEM134Q9H6X4 195 aa10.18□□□□□ -0.78
CLK1-214ENST00000496205 ZNF787Q6DD87 383 aa10.17□□□□□ -0.78
CLK1-214ENST00000496205 PPEF1O14829 653 aaPredicted RBP10.16□□□□□ -0.78
CLK1-214ENST00000496205 SLC19A1P41440 591 aa10.16□□□□□ -0.78
CLK1-214ENST00000496205 RBM46Q8TBY0 533 aaKnown RBP10.16□□□□□ -0.78
CLK1-214ENST00000496205 RCCD1A6NED2 376 aa10.15□□□□□ -0.78
CLK1-214ENST00000496205 ACTN4O43707 911 aaKnown RBP10.14□□□□□ -0.79
CLK1-214ENST00000496205 SLC10A3P09131 477 aa10.13□□□□□ -0.79
CLK1-214ENST00000496205 SPRYD7Q5W111 196 aa10.13□□□□□ -0.79
CLK1-214ENST00000496205 NUTM2FA1L443 756 aa10.12□□□□□ -0.79
CLK1-214ENST00000496205 S1PR4O95977 384 aa10.12□□□□□ -0.79
CLK1-214ENST00000496205 LIAT1Q6ZQX7 453 aa10.12□□□□□ -0.79
CLK1-214ENST00000496205 CFHP08603 1231 aa10.11□□□□□ -0.79
CLK1-214ENST00000496205 KMT5BQ4FZB7 885 aa10.1□□□□□ -0.79
CLK1-214ENST00000496205 ANKLE1Q8NAG6 615 aa10.1□□□□□ -0.79
CLK1-214ENST00000496205 ZNF598Q86UK7 904 aaKnown RBP10.09□□□□□ -0.79
CLK1-214ENST00000496205 ZNF775Q96BV0 537 aaPredicted RBP10.09□□□□□ -0.79
CLK1-214ENST00000496205 MYT1Q01538 1121 aa10.08□□□□□ -0.8
CLK1-214ENST00000496205 PLA2G2CQ5R387 149 aa10.06□□□□□ -0.8
CLK1-214ENST00000496205 POTECB2RU33 542 aa10.05□□□□□ -0.8
CLK1-214ENST00000496205 SEMA3EO15041 775 aa10.05□□□□□ -0.8
CLK1-214ENST00000496205 FCHSD2O94868 740 aa10.05□□□□□ -0.8
CLK1-214ENST00000496205 ADH1BP00325 375 aa10.05□□□□□ -0.8
CLK1-214ENST00000496205 PRR20EP86478 221 aa10.05□□□□□ -0.8
CLK1-214ENST00000496205 PRR20CP86479 221 aa10.05□□□□□ -0.8
CLK1-214ENST00000496205 PRR20DP86480 221 aa10.05□□□□□ -0.8
CLK1-214ENST00000496205 PRR20BP86481 221 aa10.05□□□□□ -0.8
CLK1-214ENST00000496205 PRR20AP86496 221 aa10.05□□□□□ -0.8
CLK1-214ENST00000496205 ZNF697Q5TEC3 545 aa10.05□□□□□ -0.8
CLK1-214ENST00000496205 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.04□□□□□ -0.8
CLK1-214ENST00000496205 GDF9O60383 454 aa10.04□□□□□ -0.8
CLK1-214ENST00000496205 PKDCCQ504Y2 493 aa10.04□□□□□ -0.8
CLK1-214ENST00000496205 SCUBE3Q8IX30 993 aa10.04□□□□□ -0.8
CLK1-214ENST00000496205 PXYLP1Q8TE99 480 aa10.04□□□□□ -0.8
CLK1-214ENST00000496205 TNFRSF10AO00220 468 aa10.03□□□□□ -0.8
CLK1-214ENST00000496205 NR1I2O75469 434 aa10.03□□□□□ -0.8
CLK1-214ENST00000496205 DGAT1O75907 488 aa10.03□□□□□ -0.8
CLK1-214ENST00000496205 PUS10Q3MIT2 529 aaKnown RBP10.03□□□□□ -0.8
CLK1-214ENST00000496205 SLC6A16Q9GZN6 736 aa10.02□□□□□ -0.81
CLK1-214ENST00000496205 OATP04181 439 aa10□□□□□ -0.81
CLK1-214ENST00000496205 FAM187AA6NFU0 413 aa9.99□□□□□ -0.81
CLK1-214ENST00000496205 METTL3Q86U44 580 aaKnown RBP9.99□□□□□ -0.81
CLK1-214ENST00000496205 FECHP22830 423 aa9.98□□□□□ -0.81
CLK1-214ENST00000496205 RBM26Q5T8P6 1007 aaKnown RBP9.97□□□□□ -0.81
CLK1-214ENST00000496205 SPSB2Q99619 263 aa9.97□□□□□ -0.81
CLK1-214ENST00000496205 HIC1Q14526 733 aa9.96□□□□□ -0.82
CLK1-214ENST00000496205 PKD2L1Q9P0L9 805 aa9.96□□□□□ -0.82
CLK1-214ENST00000496205 ST8SIA5O15466 376 aa9.95□□□□□ -0.82
CLK1-214ENST00000496205 P3H3Q8IVL6 736 aa9.95□□□□□ -0.82
CLK1-214ENST00000496205 NLRP7Q8WX94 980 aa9.94□□□□□ -0.82
CLK1-214ENST00000496205 AAASQ9NRG9 546 aa9.94□□□□□ -0.82
CLK1-214ENST00000496205 FOXC1Q12948 553 aa9.93□□□□□ -0.82
CLK1-214ENST00000496205 MORN1Q5T089 497 aa9.93□□□□□ -0.82
CLK1-214ENST00000496205 TESPA1A2RU30 521 aaPredicted RBP9.92□□□□□ -0.82
CLK1-214ENST00000496205 THAP11Q96EK4 314 aa9.92□□□□□ -0.82
CLK1-214ENST00000496205 GPR37O15354 613 aa9.91□□□□□ -0.82
CLK1-214ENST00000496205 FUT2Q10981 343 aa9.91□□□□□ -0.82
CLK1-214ENST00000496205 RSPH4AQ5TD94 716 aa9.91□□□□□ -0.82
CLK1-214ENST00000496205 DAXXQ9UER7 740 aaPredicted RBP9.91□□□□□ -0.82
CLK1-214ENST00000496205 GNPATO15228 680 aa9.9□□□□□ -0.82
CLK1-214ENST00000496205 FAM160A2Q8N612 972 aaPredicted RBP9.9□□□□□ -0.82
CLK1-214ENST00000496205 RDH13Q8NBN7 331 aa9.9□□□□□ -0.82
CLK1-214ENST00000496205 DDX11L8A8MPP1 907 aa9.89□□□□□ -0.83
CLK1-214ENST00000496205 FCF1Q9Y324 198 aaKnown RBP9.89□□□□□ -0.83
CLK1-214ENST00000496205 PHOX2BQ99453 314 aa9.88□□□□□ -0.83
CLK1-214ENST00000496205 DACH1Q9UI36 760 aa9.88□□□□□ -0.83
CLK1-214ENST00000496205 SLC27A5Q9Y2P5 690 aa9.88□□□□□ -0.83
CLK1-214ENST00000496205 ATP6V1AP38606 617 aa9.87□□□□□ -0.83
CLK1-214ENST00000496205 RPIAP49247 311 aa9.87□□□□□ -0.83
CLK1-214ENST00000496205 GCGRP47871 477 aa9.86□□□□□ -0.83
CLK1-214ENST00000496205 LMOD2Q6P5Q4 547 aa9.86□□□□□ -0.83
CLK1-214ENST00000496205 PRDM9Q9NQV7 894 aa9.86□□□□□ -0.83
CLK1-214ENST00000496205 TOR4AQ9NXH8 423 aa9.86□□□□□ -0.83
CLK1-214ENST00000496205 LCE2AQ5TA79 106 aaPredicted RBP9.85□□□□□ -0.83
CLK1-214ENST00000496205 FMNL1O95466 1100 aaPredicted RBP9.84□□□□□ -0.83
CLK1-214ENST00000496205 CD2BP2O95400 341 aaKnown RBP9.83□□□□□ -0.84
CLK1-214ENST00000496205 BRICD5Q6PL45 260 aa9.83□□□□□ -0.84
CLK1-214ENST00000496205 TREML4Q6UXN2 200 aa9.83□□□□□ -0.84
CLK1-214ENST00000496205 CRIPAKQ8N1N5 446 aa9.83□□□□□ -0.84
CLK1-214ENST00000496205 AVPP01185 164 aa9.82□□□□□ -0.84
CLK1-214ENST00000496205 SMYD5Q6GMV2 418 aa9.82□□□□□ -0.84
CLK1-214ENST00000496205 RNF19BQ6ZMZ0 732 aa9.82□□□□□ -0.84
CLK1-214ENST00000496205 SALL2Q9Y467 1007 aaPredicted RBP9.81□□□□□ -0.84
CLK1-214ENST00000496205 CYP4X1Q8N118 509 aa9.8□□□□□ -0.84
CLK1-214ENST00000496205 GMPR2Q9P2T1 348 aaKnown RBP9.79□□□□□ -0.84
CLK1-214ENST00000496205 AXIN1O15169 862 aa9.78□□□□□ -0.84
CLK1-214ENST00000496205 SULF1Q8IWU6 871 aa9.78□□□□□ -0.84
CLK1-214ENST00000496205 MSS51Q4VC12 460 aa9.77□□□□□ -0.85
CLK1-214ENST00000496205 SMCPP49901 116 aaPredicted RBP9.75□□□□□ -0.85
CLK1-214ENST00000496205 TTC24A2A3L6 582 aaPredicted RBP9.74□□□□□ -0.85
CLK1-214ENST00000496205 C11orf95C9JLR9 678 aaPredicted RBP9.74□□□□□ -0.85
CLK1-214ENST00000496205 ZBTB24O43167 697 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms