RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 ARHGAP31Q2M1Z3 1444 aa21.82■■□□□ 1.08
GAPDH-210ENST00000496049 SRCAPQ6ZRS2 3230 aa21.81■■□□□ 1.08
GAPDH-210ENST00000496049 TRPM2O94759 1503 aa21.8■■□□□ 1.08
GAPDH-210ENST00000496049 UGGT1Q9NYU2 1555 aa21.8■■□□□ 1.08
GAPDH-210ENST00000496049 ANKRD30BQ9BXX2 1392 aa21.79■■□□□ 1.08
GAPDH-210ENST00000496049 FOXD1Q16676 465 aa21.79■■□□□ 1.08
GAPDH-210ENST00000496049 THEMISQ8N1K5 641 aaPredicted RBP21.77■■□□□ 1.08
GAPDH-210ENST00000496049 CCDC144AA2RUR9 1427 aa21.76■■□□□ 1.07
GAPDH-210ENST00000496049 ZEB1P37275 1124 aaPredicted RBP21.76■■□□□ 1.07
GAPDH-210ENST00000496049 ROBO1Q9Y6N7 1651 aa21.75■■□□□ 1.07
GAPDH-210ENST00000496049 FAM135BQ49AJ0 1406 aa21.72■■□□□ 1.07
GAPDH-210ENST00000496049 ERVK-7P63135 1459 aa21.71■■□□□ 1.07
GAPDH-210ENST00000496049 NLRP1Q9C000 1473 aa21.71■■□□□ 1.07
GAPDH-210ENST00000496049 NOS1P29475 1434 aa21.7■■□□□ 1.06
GAPDH-210ENST00000496049 CLTCL1P53675 1640 aa21.69■■□□□ 1.06
GAPDH-210ENST00000496049 CFAP65Q6ZU64 1925 aaKnown RBP21.69■■□□□ 1.06
GAPDH-210ENST00000496049 NEUROD1Q13562 356 aa21.69■■□□□ 1.06
GAPDH-210ENST00000496049 TONSLQ96HA7 1378 aa21.68■■□□□ 1.06
GAPDH-210ENST00000496049 SIN3AQ96ST3 1273 aa21.67■■□□□ 1.06
GAPDH-210ENST00000496049 KIF1BO60333 1816 aa21.66■■□□□ 1.06
GAPDH-210ENST00000496049 PIK3C2BO00750 1634 aa21.66■■□□□ 1.06
GAPDH-210ENST00000496049 PHLPP1O60346 1717 aa21.66■■□□□ 1.06
GAPDH-210ENST00000496049 TIMELESSQ9UNS1 1208 aa21.64■■□□□ 1.05
GAPDH-210ENST00000496049 SLC52A1Q9NWF4 448 aa21.6■■□□□ 1.05
GAPDH-210ENST00000496049 ADGRB3O60242 1522 aa21.59■■□□□ 1.05
GAPDH-210ENST00000496049 LRP6O75581 1613 aa21.58■■□□□ 1.04
GAPDH-210ENST00000496049 JCADQ9P266 1359 aa21.57■■□□□ 1.04
GAPDH-210ENST00000496049 SCAF11Q99590 1463 aaKnown RBP21.57■■□□□ 1.04
GAPDH-210ENST00000496049 UBR1Q8IWV7 1749 aa21.56■■□□□ 1.04
GAPDH-210ENST00000496049 MEX3CQ5U5Q3 659 aaKnown RBP21.55■■□□□ 1.04
GAPDH-210ENST00000496049 TMEM94Q12767 1356 aa21.55■■□□□ 1.04
GAPDH-210ENST00000496049 KDM5AP29375 1690 aaKnown RBP21.55■■□□□ 1.04
GAPDH-210ENST00000496049 SPATA31E1Q6ZUB1 1445 aa21.55■■□□□ 1.04
GAPDH-210ENST00000496049 ZNF772Q68DY9 489 aaPredicted RBP21.53■■□□□ 1.04
GAPDH-210ENST00000496049 TMEM131LA2VDJ0 1609 aa21.51■■□□□ 1.03
GAPDH-210ENST00000496049 CHGAP10645 457 aaKnown RBP21.51■■□□□ 1.03
GAPDH-210ENST00000496049 RBM33Q96EV2 1170 aaKnown RBP21.51■■□□□ 1.03
GAPDH-210ENST00000496049 COL16A1Q07092 1604 aaPredicted RBP21.51■■□□□ 1.03
GAPDH-210ENST00000496049 STAG3Q9UJ98 1225 aa21.5■■□□□ 1.03
GAPDH-210ENST00000496049 RXRBP28702 533 aa21.49■■□□□ 1.03
GAPDH-210ENST00000496049 IDI1Q13907 227 aa21.49■■□□□ 1.03
GAPDH-210ENST00000496049 LTKP29376 864 aa21.48■■□□□ 1.03
GAPDH-210ENST00000496049 L3MBTL2Q969R5 705 aa21.48■■□□□ 1.03
GAPDH-210ENST00000496049 IFT172Q9UG01 1749 aa21.48■■□□□ 1.03
GAPDH-210ENST00000496049 MYO5BQ9ULV0 1848 aa21.48■■□□□ 1.03
GAPDH-210ENST00000496049 RGL3Q3MIN7 710 aa21.47■■□□□ 1.03
GAPDH-210ENST00000496049 ZNF326Q5BKZ1 582 aaKnown RBP21.47■■□□□ 1.03
GAPDH-210ENST00000496049 PPLO60437 1756 aa21.46■■□□□ 1.03
GAPDH-210ENST00000496049 TXNDC2Q86VQ3 553 aa21.45■■□□□ 1.02
GAPDH-210ENST00000496049 STAC3Q96MF2 364 aa21.45■■□□□ 1.02
GAPDH-210ENST00000496049 CDK12Q9NYV4 1490 aaPredicted RBP21.45■■□□□ 1.02
GAPDH-210ENST00000496049 RPGRIP1LQ68CZ1 1315 aa21.44■■□□□ 1.02
GAPDH-210ENST00000496049 MYOM2P54296 1465 aa21.44■■□□□ 1.02
GAPDH-210ENST00000496049 DCAF11Q8TEB1 546 aa21.43■■□□□ 1.02
GAPDH-210ENST00000496049 ARHGAP23Q9P227 1491 aa21.43■■□□□ 1.02
GAPDH-210ENST00000496049 SLIT1O75093 1534 aa21.42■■□□□ 1.02
GAPDH-210ENST00000496049 PROSER2Q86WR7 435 aaPredicted RBP21.42■■□□□ 1.02
GAPDH-210ENST00000496049 SETBP1Q9Y6X0 1596 aa21.42■■□□□ 1.02
GAPDH-210ENST00000496049 NEXMIFQ5QGS0 1516 aa21.41■■□□□ 1.02
GAPDH-210ENST00000496049 SPATA31A6Q5VVP1 1343 aa21.41■■□□□ 1.02
GAPDH-210ENST00000496049 SHPRHQ149N8 1683 aa21.4■■□□□ 1.02
GAPDH-210ENST00000496049 PPP1R15AO75807 674 aaPredicted RBP21.4■■□□□ 1.02
GAPDH-210ENST00000496049 RGS12O14924 1447 aa21.39■■□□□ 1.02
GAPDH-210ENST00000496049 MSH6P52701 1360 aa21.37■■□□□ 1.01
GAPDH-210ENST00000496049 SLAIN2Q9P270 581 aa21.37■■□□□ 1.01
GAPDH-210ENST00000496049 KDM2AQ9Y2K7 1162 aa21.37■■□□□ 1.01
GAPDH-210ENST00000496049 PRAG1Q86YV5 1406 aa21.37■■□□□ 1.01
GAPDH-210ENST00000496049 EID1Q9Y6B2 187 aa21.36■■□□□ 1.01
GAPDH-210ENST00000496049 KCNA6P17658 529 aa21.35■■□□□ 1.01
GAPDH-210ENST00000496049 HDGFP51858 240 aaKnown RBP21.35■■□□□ 1.01
GAPDH-210ENST00000496049 RIMS2Q9UQ26 1411 aa21.35■■□□□ 1.01
GAPDH-210ENST00000496049 NUTM2BA6NNL0 878 aaPredicted RBP21.34■■□□□ 1.01
GAPDH-210ENST00000496049 NUTM2EB1AL46 878 aaPredicted RBP21.34■■□□□ 1.01
GAPDH-210ENST00000496049 NUTM2DQ5VT03 806 aaPredicted RBP21.34■■□□□ 1.01
GAPDH-210ENST00000496049 NUTM2AQ8IVF1 878 aaPredicted RBP21.34■■□□□ 1.01
GAPDH-210ENST00000496049 ZRANB1Q9UGI0 708 aa21.34■■□□□ 1.01
GAPDH-210ENST00000496049 ZFYVE9O95405 1425 aa21.34■■□□□ 1.01
GAPDH-210ENST00000496049 LAMC1P11047 1609 aa21.33■■□□□ 1.01
GAPDH-210ENST00000496049 KIAA1210Q9ULL0 1709 aa21.33■■□□□ 1.01
GAPDH-210ENST00000496049 VGFO15240 615 aaPredicted RBP21.33■■□□□ 1.01
GAPDH-210ENST00000496049 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.33■■□□□ 1.01
GAPDH-210ENST00000496049 TMEM2Q9UHN6 1383 aa21.33■■□□□ 1
GAPDH-210ENST00000496049 TRPM1Q7Z4N2 1603 aa21.33■■□□□ 1
GAPDH-210ENST00000496049 RALGAPBQ86X10 1494 aa21.32■■□□□ 1
GAPDH-210ENST00000496049 NRXN1Q9ULB1 1477 aa21.32■■□□□ 1
GAPDH-210ENST00000496049 NWD1Q149M9 1564 aa21.32■■□□□ 1
GAPDH-210ENST00000496049 NKTRP30414 1462 aaKnown RBP21.32■■□□□ 1
GAPDH-210ENST00000496049 AFF2P51816 1311 aa21.31■■□□□ 1
GAPDH-210ENST00000496049 SLC26A8Q96RN1 970 aa21.31■■□□□ 1
GAPDH-210ENST00000496049 PIK3C2GO75747 1445 aa21.29■■□□□ 1
GAPDH-210ENST00000496049 AHDC1Q5TGY3 1603 aaPredicted RBP21.28■■□□□ 1
GAPDH-210ENST00000496049 NBPF8Q3BBV2 869 aa21.26■□□□□ 0.99
GAPDH-210ENST00000496049 ADGRF5Q8IZF2 1346 aa21.26■□□□□ 0.99
GAPDH-210ENST00000496049 ROCK2O75116 1388 aaKnown RBP21.25■□□□□ 0.99
GAPDH-210ENST00000496049 DIP2AQ14689 1571 aa21.23■□□□□ 0.99
GAPDH-210ENST00000496049 ATAD2Q6PL18 1390 aa21.23■□□□□ 0.99
GAPDH-210ENST00000496049 RBM6P78332 1123 aaKnown RBP21.21■□□□□ 0.99
GAPDH-210ENST00000496049 PLEKHG1Q9ULL1 1385 aa21.21■□□□□ 0.99
GAPDH-210ENST00000496049 QTRT2Q9H974 415 aaKnown RBP21.2■□□□□ 0.98
GAPDH-210ENST00000496049 GPRASP1Q5JY77 1395 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms