RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 TNRQ92752 1358 aa34.28■■■■□ 3.08
PPP1R3F-205ENST00000495799 NEXMIFQ5QGS0 1516 aa34.28■■■■□ 3.08
PPP1R3F-205ENST00000495799 C3P01024 1663 aa34.28■■■■□ 3.08
PPP1R3F-205ENST00000495799 MYO5BQ9ULV0 1848 aa34.28■■■■□ 3.08
PPP1R3F-205ENST00000495799 STAG3Q9UJ98 1225 aa34.25■■■■□ 3.07
PPP1R3F-205ENST00000495799 KDM5AP29375 1690 aaKnown RBP34.24■■■■□ 3.07
PPP1R3F-205ENST00000495799 VGFO15240 615 aaPredicted RBP34.23■■■■□ 3.07
PPP1R3F-205ENST00000495799 ZFYVE9O95405 1425 aa34.22■■■■□ 3.07
PPP1R3F-205ENST00000495799 ADGRF5Q8IZF2 1346 aa34.22■■■■□ 3.07
PPP1R3F-205ENST00000495799 POLR1AO95602 1720 aaPredicted RBP34.19■■■■□ 3.06
PPP1R3F-205ENST00000495799 NBPF1Q3BBV0 1214 aa34.19■■■■□ 3.06
PPP1R3F-205ENST00000495799 PIK3C2GO75747 1445 aa34.19■■■■□ 3.06
PPP1R3F-205ENST00000495799 A2ML1A8K2U0 1454 aa34.18■■■■□ 3.06
PPP1R3F-205ENST00000495799 NLRP1Q9C000 1473 aa34.18■■■■□ 3.06
PPP1R3F-205ENST00000495799 ADAMTSL3P82987 1691 aa34.18■■■■□ 3.06
PPP1R3F-205ENST00000495799 RIMS1Q86UR5 1692 aaKnown RBP34.16■■■■□ 3.06
PPP1R3F-205ENST00000495799 SETBP1Q9Y6X0 1596 aa34.15■■■■□ 3.06
PPP1R3F-205ENST00000495799 IQGAP1P46940 1657 aa34.14■■■■□ 3.06
PPP1R3F-205ENST00000495799 SCAF11Q99590 1463 aaKnown RBP34.1■■■■□ 3.05
PPP1R3F-205ENST00000495799 UBR1Q8IWV7 1749 aa34.09■■■■□ 3.05
PPP1R3F-205ENST00000495799 CFAP70Q5T0N1 1121 aa34.08■■■■□ 3.05
PPP1R3F-205ENST00000495799 C14orf93Q9H972 538 aaKnown RBP34.08■■■■□ 3.05
PPP1R3F-205ENST00000495799 EIF3AQ14152 1382 aaKnown RBP34.07■■■■□ 3.05
PPP1R3F-205ENST00000495799 CEBPAP49715 358 aaPredicted RBP34.07■■■■□ 3.04
PPP1R3F-205ENST00000495799 RIMS2Q9UQ26 1411 aa34.07■■■■□ 3.04
PPP1R3F-205ENST00000495799 ST20-MTHFSA0A0A6YYL1 179 aa34.06■■■■□ 3.04
PPP1R3F-205ENST00000495799 HDGFP51858 240 aaKnown RBP34.05■■■■□ 3.04
PPP1R3F-205ENST00000495799 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.05■■■■□ 3.04
PPP1R3F-205ENST00000495799 CCDC7Q96M83 1385 aa34.05■■■■□ 3.04
PPP1R3F-205ENST00000495799 WASHC2AQ641Q2 1341 aa34.05■■■■□ 3.04
PPP1R3F-205ENST00000495799 DDX10Q13206 875 aaKnown RBP34.03■■■■□ 3.04
PPP1R3F-205ENST00000495799 MYO3AQ8NEV4 1616 aa34■■■■□ 3.03
PPP1R3F-205ENST00000495799 NUTM2DQ5VT03 806 aaPredicted RBP33.99■■■■□ 3.03
PPP1R3F-205ENST00000495799 ADGRB1O14514 1584 aa33.98■■■■□ 3.03
PPP1R3F-205ENST00000495799 KIF7Q2M1P5 1343 aa33.97■■■■□ 3.03
PPP1R3F-205ENST00000495799 PLPPR3Q6T4P5 718 aa33.95■■■■□ 3.03
PPP1R3F-205ENST00000495799 TMEM2Q9UHN6 1383 aa33.95■■■■□ 3.03
PPP1R3F-205ENST00000495799 C11orf95C9JLR9 678 aaPredicted RBP33.94■■■■□ 3.02
PPP1R3F-205ENST00000495799 SLC24A1O60721 1099 aa33.93■■■■□ 3.02
PPP1R3F-205ENST00000495799 ALKQ9UM73 1620 aa33.9■■■■□ 3.02
PPP1R3F-205ENST00000495799 TMF1P82094 1093 aa33.88■■■■□ 3.01
PPP1R3F-205ENST00000495799 CEP170BQ9Y4F5 1589 aaPredicted RBP33.87■■■■□ 3.01
PPP1R3F-205ENST00000495799 SLIT1O75093 1534 aa33.87■■■■□ 3.01
PPP1R3F-205ENST00000495799 TESK2Q96S53 571 aa33.87■■■■□ 3.01
PPP1R3F-205ENST00000495799 THEMISQ8N1K5 641 aaPredicted RBP33.86■■■■□ 3.01
PPP1R3F-205ENST00000495799 ZNF142P52746 1687 aaPredicted RBP33.86■■■■□ 3.01
PPP1R3F-205ENST00000495799 SETD1BQ9UPS6 1966 aaKnown RBP33.84■■■■□ 3.01
PPP1R3F-205ENST00000495799 ARHGAP23Q9P227 1491 aa33.84■■■■□ 3.01
PPP1R3F-205ENST00000495799 EID1Q9Y6B2 187 aa33.82■■■■□ 3
PPP1R3F-205ENST00000495799 ASXL1Q8IXJ9 1541 aa33.82■■■■□ 3
PPP1R3F-205ENST00000495799 PTPRMP28827 1452 aa33.82■■■■□ 3
PPP1R3F-205ENST00000495799 TMEM132EQ6IEE7 984 aa33.81■■■■□ 3
PPP1R3F-205ENST00000495799 CDCA8Q53HL2 280 aa33.8■■■■□ 3
PPP1R3F-205ENST00000495799 MIER1Q8N108 512 aa33.8■■■■□ 3
PPP1R3F-205ENST00000495799 SBNO2Q9Y2G9 1366 aa33.8■■■■□ 3
PPP1R3F-205ENST00000495799 NRXN3Q9Y4C0 1643 aa33.8■■■■□ 3
PPP1R3F-205ENST00000495799 SETD1AO15047 1707 aaKnown RBP33.8■■■■□ 3
PPP1R3F-205ENST00000495799 ARHGEF28Q8N1W1 1705 aaKnown RBP33.79■■■■□ 3
PPP1R3F-205ENST00000495799 POLR3GLQ9BT43 218 aa33.79■■■■□ 3
PPP1R3F-205ENST00000495799 CENPJQ9HC77 1338 aaPredicted RBP33.78■■■■□ 3
PPP1R3F-205ENST00000495799 TRAK1Q9UPV9 953 aa33.78■■■■□ 3
PPP1R3F-205ENST00000495799 PLEKHG1Q9ULL1 1385 aa33.77■■■■□ 3
PPP1R3F-205ENST00000495799 QRICH2Q9H0J4 1663 aa33.76■■■□□ 2.99
PPP1R3F-205ENST00000495799 DISP3Q9P2K9 1392 aa33.75■■■□□ 2.99
PPP1R3F-205ENST00000495799 YTHDC2Q9H6S0 1430 aaKnown RBP33.75■■■□□ 2.99
PPP1R3F-205ENST00000495799 TXNDC2Q86VQ3 553 aa33.74■■■□□ 2.99
PPP1R3F-205ENST00000495799 ANP32CO43423 234 aa33.73■■■□□ 2.99
PPP1R3F-205ENST00000495799 BCANQ96GW7 911 aa33.7■■■□□ 2.99
PPP1R3F-205ENST00000495799 LRPPRCP42704 1394 aaKnown RBP33.69■■■□□ 2.98
PPP1R3F-205ENST00000495799 DLC1Q96QB1 1528 aa33.69■■■□□ 2.98
PPP1R3F-205ENST00000495799 LTKP29376 864 aa33.68■■■□□ 2.98
PPP1R3F-205ENST00000495799 SENP3Q9H4L4 574 aaPredicted RBP33.68■■■□□ 2.98
PPP1R3F-205ENST00000495799 DIP2AQ14689 1571 aa33.66■■■□□ 2.98
PPP1R3F-205ENST00000495799 STK26Q9P289 416 aa33.64■■■□□ 2.98
PPP1R3F-205ENST00000495799 KNDC1Q76NI1 1749 aa33.64■■■□□ 2.98
PPP1R3F-205ENST00000495799 ADAMTS13Q76LX8 1427 aa33.63■■■□□ 2.97
PPP1R3F-205ENST00000495799 ABCC11Q96J66 1382 aa33.62■■■□□ 2.97
PPP1R3F-205ENST00000495799 MED14O60244 1454 aa33.59■■■□□ 2.97
PPP1R3F-205ENST00000495799 METP08581 1390 aa33.58■■■□□ 2.97
PPP1R3F-205ENST00000495799 POGKQ9P215 609 aa33.57■■■□□ 2.96
PPP1R3F-205ENST00000495799 ANKLE2Q86XL3 938 aa33.56■■■□□ 2.96
PPP1R3F-205ENST00000495799 TECPR2O15040 1411 aa33.56■■■□□ 2.96
PPP1R3F-205ENST00000495799 SIRT1Q96EB6 747 aa33.54■■■□□ 2.96
PPP1R3F-205ENST00000495799 TBX22Q9Y458 520 aa33.54■■■□□ 2.96
PPP1R3F-205ENST00000495799 EVC2Q86UK5 1308 aa33.54■■■□□ 2.96
PPP1R3F-205ENST00000495799 CPS1P31327 1500 aa33.54■■■□□ 2.96
PPP1R3F-205ENST00000495799 PUS7Q96PZ0 661 aaKnown RBP33.53■■■□□ 2.96
PPP1R3F-205ENST00000495799 PRAM1Q96QH2 718 aa33.53■■■□□ 2.96
PPP1R3F-205ENST00000495799 FAM135BQ49AJ0 1406 aa33.51■■■□□ 2.96
PPP1R3F-205ENST00000495799 MYOM1P52179 1685 aa33.5■■■□□ 2.95
PPP1R3F-205ENST00000495799 CCER2I3L3R5 266 aa33.48■■■□□ 2.95
PPP1R3F-205ENST00000495799 TULP4Q9NRJ4 1543 aa33.48■■■□□ 2.95
PPP1R3F-205ENST00000495799 PIK3R4Q99570 1358 aa33.46■■■□□ 2.95
PPP1R3F-205ENST00000495799 SLC26A8Q96RN1 970 aa33.45■■■□□ 2.95
PPP1R3F-205ENST00000495799 SAFB2Q14151 953 aaKnown RBP eCLIP33.43■■■□□ 2.94
PPP1R3F-205ENST00000495799 PRKRIP1Q9H875 184 aaPredicted RBP33.43■■■□□ 2.94
PPP1R3F-205ENST00000495799 PANK3Q9H999 370 aa33.43■■■□□ 2.94
PPP1R3F-205ENST00000495799 KTN1Q86UP2 1357 aaKnown RBP33.41■■■□□ 2.94
PPP1R3F-205ENST00000495799 KDM4FA0A1W2PPD8 638 aa33.4■■■□□ 2.94
PPP1R3F-205ENST00000495799 MINK1Q8N4C8 1332 aaPredicted RBP33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms