RNA–Protein interactions for RNA: ENST00000495428.5

CMC1-211, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 608 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-211ENST00000495428 METTL3Q86U44 580 aaKnown RBP8.05□□□□□ -1.12
CMC1-211ENST00000495428 SLF2Q8IX21 1173 aa8.05□□□□□ -1.12
CMC1-211ENST00000495428 TMEM134Q9H6X4 195 aa8.05□□□□□ -1.12
CMC1-211ENST00000495428 MAP2K5Q13163 448 aa8.04□□□□□ -1.12
CMC1-211ENST00000495428 BCANQ96GW7 911 aa8.04□□□□□ -1.12
CMC1-211ENST00000495428 NECTIN2Q92692 538 aa8.03□□□□□ -1.12
CMC1-211ENST00000495428 MINK1Q8N4C8 1332 aaPredicted RBP8.03□□□□□ -1.12
CMC1-211ENST00000495428 RNF40O75150 1001 aa8.02□□□□□ -1.13
CMC1-211ENST00000495428 IRF6O14896 467 aa8.01□□□□□ -1.13
CMC1-211ENST00000495428 ZC3H15Q8WU90 426 aaKnown RBP8.01□□□□□ -1.13
CMC1-211ENST00000495428 ZMYND10O75800 440 aa7.99□□□□□ -1.13
CMC1-211ENST00000495428 BARGINQ6ZT62 677 aa7.99□□□□□ -1.13
CMC1-211ENST00000495428 PHOX2BQ99453 314 aa7.98□□□□□ -1.13
CMC1-211ENST00000495428 DAXXQ9UER7 740 aaPredicted RBP7.98□□□□□ -1.13
CMC1-211ENST00000495428 CCDC102AQ96A19 550 aa7.97□□□□□ -1.13
CMC1-211ENST00000495428 ITGBL1O95965 494 aaPredicted RBP7.96□□□□□ -1.14
CMC1-211ENST00000495428 APLP1P51693 650 aa7.96□□□□□ -1.14
CMC1-211ENST00000495428 KRI1Q8N9T8 703 aaKnown RBP7.96□□□□□ -1.14
CMC1-211ENST00000495428 PRR14Q9BWN1 585 aa7.96□□□□□ -1.14
CMC1-211ENST00000495428 RSPH4AQ5TD94 716 aa7.95□□□□□ -1.14
CMC1-211ENST00000495428 NLRP7Q8WX94 980 aa7.95□□□□□ -1.14
CMC1-211ENST00000495428 SLC10A3P09131 477 aa7.94□□□□□ -1.14
CMC1-211ENST00000495428 Q6ZNB5 142 aa7.94□□□□□ -1.14
CMC1-211ENST00000495428 KMT5BQ4FZB7 885 aa7.93□□□□□ -1.14
CMC1-211ENST00000495428 SULF1Q8IWU6 871 aa7.93□□□□□ -1.14
CMC1-211ENST00000495428 CFHP08603 1231 aa7.92□□□□□ -1.14
CMC1-211ENST00000495428 KCNC4Q03721 635 aa7.92□□□□□ -1.14
CMC1-211ENST00000495428 DDX11L8A8MPP1 907 aa7.91□□□□□ -1.14
CMC1-211ENST00000495428 MDM2Q00987 491 aaPredicted RBP7.91□□□□□ -1.14
CMC1-211ENST00000495428 TJAP1Q5JTD0 557 aa7.91□□□□□ -1.14
CMC1-211ENST00000495428 MTRQ99707 1265 aa7.91□□□□□ -1.14
CMC1-211ENST00000495428 ACTN4O43707 911 aaKnown RBP7.9□□□□□ -1.14
CMC1-211ENST00000495428 RDH13Q8NBN7 331 aa7.9□□□□□ -1.14
CMC1-211ENST00000495428 IL21Q9HBE4 155 aa7.9□□□□□ -1.14
CMC1-211ENST00000495428 CLCN1P35523 988 aa7.89□□□□□ -1.15
CMC1-211ENST00000495428 PCDHB3Q9Y5E6 796 aa7.89□□□□□ -1.15
CMC1-211ENST00000495428 GPCPD1Q9NPB8 672 aa7.88□□□□□ -1.15
CMC1-211ENST00000495428 COPS2P61201 443 aa7.87□□□□□ -1.15
CMC1-211ENST00000495428 AMHR2Q16671 573 aa7.87□□□□□ -1.15
CMC1-211ENST00000495428 AK7Q96M32 723 aa7.87□□□□□ -1.15
CMC1-211ENST00000495428 TMUB1Q9BVT8 246 aa7.87□□□□□ -1.15
CMC1-211ENST00000495428 GCGRP47871 477 aa7.86□□□□□ -1.15
CMC1-211ENST00000495428 LAPTM4AQ15012 233 aa7.86□□□□□ -1.15
CMC1-211ENST00000495428 CD46P15529 392 aa7.85□□□□□ -1.15
CMC1-211ENST00000495428 BLOC1S3Q6QNY0 202 aa7.85□□□□□ -1.15
CMC1-211ENST00000495428 ZNF516Q92618 1163 aa7.85□□□□□ -1.15
CMC1-211ENST00000495428 FAM217BQ9NTX9 383 aaPredicted RBP7.85□□□□□ -1.15
CMC1-211ENST00000495428 TRIM66O15016 1216 aa7.84□□□□□ -1.15
CMC1-211ENST00000495428 ZPR1O75312 459 aa7.84□□□□□ -1.15
CMC1-211ENST00000495428 TTLL12Q14166 644 aaPredicted RBP7.84□□□□□ -1.15
CMC1-211ENST00000495428 NR1I2O75469 434 aa7.83□□□□□ -1.16
CMC1-211ENST00000495428 REPIN1Q9BWE0 567 aaKnown RBP7.83□□□□□ -1.16
CMC1-211ENST00000495428 SLC24A3Q9HC58 644 aa7.83□□□□□ -1.16
CMC1-211ENST00000495428 ATP6V1AP38606 617 aa7.82□□□□□ -1.16
CMC1-211ENST00000495428 FUT2Q10981 343 aa7.82□□□□□ -1.16
CMC1-211ENST00000495428 PUS10Q3MIT2 529 aaKnown RBP7.81□□□□□ -1.16
CMC1-211ENST00000495428 GRIPAP1Q4V328 841 aa7.81□□□□□ -1.16
CMC1-211ENST00000495428 SSTR3P32745 418 aaPredicted RBP7.8□□□□□ -1.16
CMC1-211ENST00000495428 MORN1Q5T089 497 aa7.8□□□□□ -1.16
CMC1-211ENST00000495428 GIGYF2Q6Y7W6 1299 aaKnown RBP7.8□□□□□ -1.16
CMC1-211ENST00000495428 SCUBE3Q8IX30 993 aa7.8□□□□□ -1.16
CMC1-211ENST00000495428 NKX2-3Q8TAU0 364 aa7.8□□□□□ -1.16
CMC1-211ENST00000495428 KDM4AO75164 1064 aa7.79□□□□□ -1.16
CMC1-211ENST00000495428 USP46P62068 366 aa7.79□□□□□ -1.16
CMC1-211ENST00000495428 PARP9Q8IXQ6 854 aa7.79□□□□□ -1.16
CMC1-211ENST00000495428 PDE4DQ08499 809 aa7.78□□□□□ -1.16
CMC1-211ENST00000495428 TLL1O43897 1013 aa7.77□□□□□ -1.17
CMC1-211ENST00000495428 ADH1BP00325 375 aa7.77□□□□□ -1.17
CMC1-211ENST00000495428 TRAF7Q6Q0C0 670 aa7.77□□□□□ -1.17
CMC1-211ENST00000495428 SLC27A5Q9Y2P5 690 aa7.77□□□□□ -1.17
CMC1-211ENST00000495428 GGCXP38435 758 aa7.76□□□□□ -1.17
CMC1-211ENST00000495428 PPP1R18Q6NYC8 613 aa7.76□□□□□ -1.17
CMC1-211ENST00000495428 NUTM1Q86Y26 1132 aa7.76□□□□□ -1.17
CMC1-211ENST00000495428 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.76□□□□□ -1.17
CMC1-211ENST00000495428 SALL2Q9Y467 1007 aaPredicted RBP7.75□□□□□ -1.17
CMC1-211ENST00000495428 HOXA2O43364 376 aa7.74□□□□□ -1.17
CMC1-211ENST00000495428 THAP11Q96EK4 314 aa7.74□□□□□ -1.17
CMC1-211ENST00000495428 SPSB2Q99619 263 aa7.74□□□□□ -1.17
CMC1-211ENST00000495428 BEGAINQ9BUH8 593 aa7.74□□□□□ -1.17
CMC1-211ENST00000495428 GFRA3O60609 400 aa7.73□□□□□ -1.17
CMC1-211ENST00000495428 FMNL1O95466 1100 aaPredicted RBP7.73□□□□□ -1.17
CMC1-211ENST00000495428 MS4A1P11836 297 aa7.73□□□□□ -1.17
CMC1-211ENST00000495428 Q3C1V9 767 aa7.73□□□□□ -1.17
CMC1-211ENST00000495428 BRICD5Q6PL45 260 aa7.72□□□□□ -1.17
CMC1-211ENST00000495428 SPIRE2Q8WWL2 714 aa7.72□□□□□ -1.17
CMC1-211ENST00000495428 SLC6A16Q9GZN6 736 aa7.72□□□□□ -1.17
CMC1-211ENST00000495428 LCE2BO14633 110 aa7.71□□□□□ -1.18
CMC1-211ENST00000495428 S1PR4O95977 384 aa7.71□□□□□ -1.18
CMC1-211ENST00000495428 RNF223E7ERA6 249 aa7.7□□□□□ -1.18
CMC1-211ENST00000495428 DIXDC1Q155Q3 683 aa7.7□□□□□ -1.18
CMC1-211ENST00000495428 RNF19BQ6ZMZ0 732 aa7.7□□□□□ -1.18
CMC1-211ENST00000495428 HLA-CQ95604 372 aa7.7□□□□□ -1.18
CMC1-211ENST00000495428 FAM160A2Q8N612 972 aaPredicted RBP7.69□□□□□ -1.18
CMC1-211ENST00000495428 TBC1D2Q9BYX2 928 aa7.69□□□□□ -1.18
CMC1-211ENST00000495428 NRG2O14511 850 aaPredicted RBP7.68□□□□□ -1.18
CMC1-211ENST00000495428 FDX1P10109 184 aa7.68□□□□□ -1.18
CMC1-211ENST00000495428 GUCA2AQ02747 115 aa7.68□□□□□ -1.18
CMC1-211ENST00000495428 MSS51Q4VC12 460 aa7.68□□□□□ -1.18
CMC1-211ENST00000495428 ANKLE1Q8NAG6 615 aa7.68□□□□□ -1.18
CMC1-211ENST00000495428 MOXD2PA6NHM9 499 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms