RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 FCHSD2O94868 740 aa9.79□□□□□ -0.84
RBM39-240ENST00000495293 SLC10A3P09131 477 aa9.78□□□□□ -0.84
RBM39-240ENST00000495293 BLOC1S3Q6QNY0 202 aa9.78□□□□□ -0.84
RBM39-240ENST00000495293 RBM46Q8TBY0 533 aaKnown RBP9.78□□□□□ -0.84
RBM39-240ENST00000495293 LAPTM4AQ15012 233 aa9.77□□□□□ -0.85
RBM39-240ENST00000495293 TLL1O43897 1013 aa9.76□□□□□ -0.85
RBM39-240ENST00000495293 PXYLP1Q8TE99 480 aa9.76□□□□□ -0.85
RBM39-240ENST00000495293 PRKD2Q9BZL6 878 aa9.76□□□□□ -0.85
RBM39-240ENST00000495293 ZPR1O75312 459 aa9.75□□□□□ -0.85
RBM39-240ENST00000495293 TRAF7Q6Q0C0 670 aa9.75□□□□□ -0.85
RBM39-240ENST00000495293 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.75□□□□□ -0.85
RBM39-240ENST00000495293 HAP1P54257 671 aaPredicted RBP9.74□□□□□ -0.85
RBM39-240ENST00000495293 METTL3Q86U44 580 aaKnown RBP9.73□□□□□ -0.85
RBM39-240ENST00000495293 NLRP7Q8WX94 980 aa9.73□□□□□ -0.85
RBM39-240ENST00000495293 EMID1Q96A84 441 aaPredicted RBP9.73□□□□□ -0.85
RBM39-240ENST00000495293 PCDHB3Q9Y5E6 796 aa9.73□□□□□ -0.85
RBM39-240ENST00000495293 CFHP08603 1231 aa9.72□□□□□ -0.85
RBM39-240ENST00000495293 HIC1Q14526 733 aa9.72□□□□□ -0.85
RBM39-240ENST00000495293 NECTIN2Q92692 538 aa9.72□□□□□ -0.85
RBM39-240ENST00000495293 ACTN4O43707 911 aaKnown RBP9.71□□□□□ -0.86
RBM39-240ENST00000495293 PHOX2BQ99453 314 aa9.71□□□□□ -0.86
RBM39-240ENST00000495293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.7□□□□□ -0.86
RBM39-240ENST00000495293 GNPATO15228 680 aa9.69□□□□□ -0.86
RBM39-240ENST00000495293 GFRA3O60609 400 aa9.69□□□□□ -0.86
RBM39-240ENST00000495293 RNF223E7ERA6 249 aa9.67□□□□□ -0.86
RBM39-240ENST00000495293 PRR14Q9BWN1 585 aa9.67□□□□□ -0.86
RBM39-240ENST00000495293 V9GY48 417 aaPredicted RBP9.67□□□□□ -0.86
RBM39-240ENST00000495293 PPEF1O14829 653 aaPredicted RBP9.66□□□□□ -0.86
RBM39-240ENST00000495293 OATP04181 439 aa9.66□□□□□ -0.86
RBM39-240ENST00000495293 SLC4A3P48751 1232 aa9.66□□□□□ -0.86
RBM39-240ENST00000495293 PUS10Q3MIT2 529 aaKnown RBP9.65□□□□□ -0.86
RBM39-240ENST00000495293 S1PR4O95977 384 aa9.64□□□□□ -0.87
RBM39-240ENST00000495293 KMT5BQ4FZB7 885 aa9.64□□□□□ -0.87
RBM39-240ENST00000495293 TRIM67Q6ZTA4 783 aa9.63□□□□□ -0.87
RBM39-240ENST00000495293 SMYD5Q6GMV2 418 aa9.62□□□□□ -0.87
RBM39-240ENST00000495293 TMUB1Q9BVT8 246 aa9.62□□□□□ -0.87
RBM39-240ENST00000495293 PLA2G2CQ5R387 149 aa9.61□□□□□ -0.87
RBM39-240ENST00000495293 NRG2O14511 850 aaPredicted RBP9.6□□□□□ -0.87
RBM39-240ENST00000495293 GPIHBP1Q8IV16 184 aa9.6□□□□□ -0.87
RBM39-240ENST00000495293 SCUBE3Q8IX30 993 aa9.6□□□□□ -0.87
RBM39-240ENST00000495293 GGCXP38435 758 aa9.59□□□□□ -0.87
RBM39-240ENST00000495293 DAXXQ9UER7 740 aaPredicted RBP9.59□□□□□ -0.87
RBM39-240ENST00000495293 ADH1BP00325 375 aa9.58□□□□□ -0.88
RBM39-240ENST00000495293 LIAT1Q6ZQX7 453 aa9.58□□□□□ -0.88
RBM39-240ENST00000495293 DDX11L8A8MPP1 907 aa9.57□□□□□ -0.88
RBM39-240ENST00000495293 FUT2Q10981 343 aa9.57□□□□□ -0.88
RBM39-240ENST00000495293 PDZRN3Q9UPQ7 1066 aa9.57□□□□□ -0.88
RBM39-240ENST00000495293 SLC19A1P41440 591 aa9.56□□□□□ -0.88
RBM39-240ENST00000495293 MORN1Q5T089 497 aa9.56□□□□□ -0.88
RBM39-240ENST00000495293 ANKLE1Q8NAG6 615 aa9.56□□□□□ -0.88
RBM39-240ENST00000495293 RDH13Q8NBN7 331 aa9.56□□□□□ -0.88
RBM39-240ENST00000495293 NR1I2O75469 434 aa9.55□□□□□ -0.88
RBM39-240ENST00000495293 SPRYD7Q5W111 196 aa9.55□□□□□ -0.88
RBM39-240ENST00000495293 ZNF787Q6DD87 383 aa9.55□□□□□ -0.88
RBM39-240ENST00000495293 THAP11Q96EK4 314 aa9.55□□□□□ -0.88
RBM39-240ENST00000495293 SLC6A16Q9GZN6 736 aa9.54□□□□□ -0.88
RBM39-240ENST00000495293 ZNF775Q96BV0 537 aaPredicted RBP9.53□□□□□ -0.88
RBM39-240ENST00000495293 GCGRP47871 477 aa9.52□□□□□ -0.89
RBM39-240ENST00000495293 VSIG10Q8N0Z9 540 aa9.52□□□□□ -0.89
RBM39-240ENST00000495293 SPSB2Q99619 263 aa9.52□□□□□ -0.89
RBM39-240ENST00000495293 SLC27A5Q9Y2P5 690 aa9.52□□□□□ -0.89
RBM39-240ENST00000495293 FAM160A2Q8N612 972 aaPredicted RBP9.51□□□□□ -0.89
RBM39-240ENST00000495293 PRDM9Q9NQV7 894 aa9.51□□□□□ -0.89
RBM39-240ENST00000495293 MAP2K5Q13163 448 aa9.49□□□□□ -0.89
RBM39-240ENST00000495293 RNF19BQ6ZMZ0 732 aa9.49□□□□□ -0.89
RBM39-240ENST00000495293 ZNF598Q86UK7 904 aaKnown RBP9.49□□□□□ -0.89
RBM39-240ENST00000495293 GDF9O60383 454 aa9.48□□□□□ -0.89
RBM39-240ENST00000495293 ATP6V1AP38606 617 aa9.48□□□□□ -0.89
RBM39-240ENST00000495293 ZNF697Q5TEC3 545 aa9.48□□□□□ -0.89
RBM39-240ENST00000495293 IRF6O14896 467 aa9.47□□□□□ -0.89
RBM39-240ENST00000495293 CD46P15529 392 aa9.47□□□□□ -0.89
RBM39-240ENST00000495293 RSPH4AQ5TD94 716 aa9.47□□□□□ -0.89
RBM39-240ENST00000495293 HLA-CQ95604 372 aa9.47□□□□□ -0.89
RBM39-240ENST00000495293 TNFRSF10AO00220 468 aa9.46□□□□□ -0.9
RBM39-240ENST00000495293 SULF1Q8IWU6 871 aa9.45□□□□□ -0.9
RBM39-240ENST00000495293 CCDC102AQ96A19 550 aa9.45□□□□□ -0.9
RBM39-240ENST00000495293 PRR20EP86478 221 aa9.44□□□□□ -0.9
RBM39-240ENST00000495293 PRR20CP86479 221 aa9.44□□□□□ -0.9
RBM39-240ENST00000495293 PRR20DP86480 221 aa9.44□□□□□ -0.9
RBM39-240ENST00000495293 PRR20BP86481 221 aa9.44□□□□□ -0.9
RBM39-240ENST00000495293 PRR20AP86496 221 aa9.44□□□□□ -0.9
RBM39-240ENST00000495293 MDM2Q00987 491 aaPredicted RBP9.44□□□□□ -0.9
RBM39-240ENST00000495293 BRICD5Q6PL45 260 aa9.44□□□□□ -0.9
RBM39-240ENST00000495293 PKD2L1Q9P0L9 805 aa9.44□□□□□ -0.9
RBM39-240ENST00000495293 FCF1Q9Y324 198 aaKnown RBP9.44□□□□□ -0.9
RBM39-240ENST00000495293 FMNL1O95466 1100 aaPredicted RBP9.42□□□□□ -0.9
RBM39-240ENST00000495293 MYT1Q01538 1121 aa9.42□□□□□ -0.9
RBM39-240ENST00000495293 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.41□□□□□ -0.9
RBM39-240ENST00000495293 REPIN1Q9BWE0 567 aaKnown RBP9.41□□□□□ -0.9
RBM39-240ENST00000495293 MINK1Q8N4C8 1332 aaPredicted RBP9.4□□□□□ -0.9
RBM39-240ENST00000495293 SALL2Q9Y467 1007 aaPredicted RBP9.4□□□□□ -0.9
RBM39-240ENST00000495293 GUCA2AQ02747 115 aa9.39□□□□□ -0.91
RBM39-240ENST00000495293 POTECB2RU33 542 aa9.38□□□□□ -0.91
RBM39-240ENST00000495293 MSS51Q4VC12 460 aa9.38□□□□□ -0.91
RBM39-240ENST00000495293 KDM4AO75164 1064 aa9.37□□□□□ -0.91
RBM39-240ENST00000495293 FOXC1Q12948 553 aa9.37□□□□□ -0.91
RBM39-240ENST00000495293 FAM187AA6NFU0 413 aa9.36□□□□□ -0.91
RBM39-240ENST00000495293 PKDCCQ504Y2 493 aa9.36□□□□□ -0.91
RBM39-240ENST00000495293 FAM217BQ9NTX9 383 aaPredicted RBP9.36□□□□□ -0.91
RBM39-240ENST00000495293 ST8SIA5O15466 376 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms