RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 TBX22Q9Y458 520 aa10.77□□□□□ -0.69
RBM39-239ENST00000494274 CPS1P31327 1500 aa10.77□□□□□ -0.69
RBM39-239ENST00000494274 TET3O43151 1660 aa10.76□□□□□ -0.69
RBM39-239ENST00000494274 UBR1Q8IWV7 1749 aa10.76□□□□□ -0.69
RBM39-239ENST00000494274 MPHOSPH9Q99550 1183 aa10.76□□□□□ -0.69
RBM39-239ENST00000494274 PLEKHG1Q9ULL1 1385 aa10.76□□□□□ -0.69
RBM39-239ENST00000494274 ADGRB3O60242 1522 aa10.75□□□□□ -0.69
RBM39-239ENST00000494274 LRRC7Q96NW7 1537 aa10.74□□□□□ -0.69
RBM39-239ENST00000494274 IQGAP3Q86VI3 1631 aa10.74□□□□□ -0.69
RBM39-239ENST00000494274 HSPA1LP34931 641 aa10.74□□□□□ -0.69
RBM39-239ENST00000494274 C14orf37Q86TY3 774 aa10.74□□□□□ -0.69
RBM39-239ENST00000494274 TMEM94Q12767 1356 aa10.74□□□□□ -0.69
RBM39-239ENST00000494274 ZFYVE9O95405 1425 aa10.74□□□□□ -0.69
RBM39-239ENST00000494274 IQGAP1P46940 1657 aa10.73□□□□□ -0.69
RBM39-239ENST00000494274 RGL3Q3MIN7 710 aa10.73□□□□□ -0.69
RBM39-239ENST00000494274 AMOTL2Q9Y2J4 779 aa10.73□□□□□ -0.69
RBM39-239ENST00000494274 SETD5Q9C0A6 1442 aa10.73□□□□□ -0.69
RBM39-239ENST00000494274 POLR1AO95602 1720 aaPredicted RBP10.72□□□□□ -0.69
RBM39-239ENST00000494274 E9PCH4 1651 aa10.72□□□□□ -0.69
RBM39-239ENST00000494274 VGFO15240 615 aaPredicted RBP10.71□□□□□ -0.69
RBM39-239ENST00000494274 DISP3Q9P2K9 1392 aa10.7□□□□□ -0.7
RBM39-239ENST00000494274 ACIN1Q9UKV3 1341 aaKnown RBP10.7□□□□□ -0.7
RBM39-239ENST00000494274 GCC2Q8IWJ2 1684 aa10.69□□□□□ -0.7
RBM39-239ENST00000494274 RAB3GAP2Q9H2M9 1393 aa10.69□□□□□ -0.7
RBM39-239ENST00000494274 TMEM131LA2VDJ0 1609 aa10.69□□□□□ -0.7
RBM39-239ENST00000494274 ADAMTS13Q76LX8 1427 aa10.68□□□□□ -0.7
RBM39-239ENST00000494274 RPGRIP1LQ68CZ1 1315 aa10.68□□□□□ -0.7
RBM39-239ENST00000494274 SLAIN2Q9P270 581 aa10.68□□□□□ -0.7
RBM39-239ENST00000494274 MSH6P52701 1360 aa10.67□□□□□ -0.7
RBM39-239ENST00000494274 C19orf44Q9H6X5 657 aa10.67□□□□□ -0.7
RBM39-239ENST00000494274 CCDC144AA2RUR9 1427 aa10.67□□□□□ -0.7
RBM39-239ENST00000494274 KDM5AP29375 1690 aaKnown RBP10.66□□□□□ -0.7
RBM39-239ENST00000494274 METP08581 1390 aa10.66□□□□□ -0.7
RBM39-239ENST00000494274 ATF3P18847 181 aa10.66□□□□□ -0.7
RBM39-239ENST00000494274 PIK3R4Q99570 1358 aa10.65□□□□□ -0.7
RBM39-239ENST00000494274 TRPM2O94759 1503 aa10.65□□□□□ -0.7
RBM39-239ENST00000494274 HRCP23327 699 aa10.64□□□□□ -0.71
RBM39-239ENST00000494274 CADPS2Q86UW7 1296 aa10.64□□□□□ -0.71
RBM39-239ENST00000494274 PTPRUQ92729 1446 aa10.64□□□□□ -0.71
RBM39-239ENST00000494274 ADGRF5Q8IZF2 1346 aa10.63□□□□□ -0.71
RBM39-239ENST00000494274 STRCP1A6NGW2 1772 aa10.63□□□□□ -0.71
RBM39-239ENST00000494274 CLTCL1P53675 1640 aa10.62□□□□□ -0.71
RBM39-239ENST00000494274 NKTRP30414 1462 aaKnown RBP10.62□□□□□ -0.71
RBM39-239ENST00000494274 FAM135BQ49AJ0 1406 aa10.62□□□□□ -0.71
RBM39-239ENST00000494274 STK26Q9P289 416 aa10.62□□□□□ -0.71
RBM39-239ENST00000494274 TMEM132EQ6IEE7 984 aa10.61□□□□□ -0.71
RBM39-239ENST00000494274 ILDR2Q71H61 639 aa10.61□□□□□ -0.71
RBM39-239ENST00000494274 KDM2AQ9Y2K7 1162 aa10.61□□□□□ -0.71
RBM39-239ENST00000494274 NCOA3Q9Y6Q9 1424 aa10.6□□□□□ -0.71
RBM39-239ENST00000494274 ALKQ9UM73 1620 aa10.6□□□□□ -0.71
RBM39-239ENST00000494274 SPHKAPQ2M3C7 1700 aa10.6□□□□□ -0.71
RBM39-239ENST00000494274 ANKRD30BQ9BXX2 1392 aa10.6□□□□□ -0.71
RBM39-239ENST00000494274 SPATA31E1Q6ZUB1 1445 aa10.58□□□□□ -0.72
RBM39-239ENST00000494274 NEXMIFQ5QGS0 1516 aa10.58□□□□□ -0.72
RBM39-239ENST00000494274 CFAP70Q5T0N1 1121 aa10.58□□□□□ -0.72
RBM39-239ENST00000494274 DCAF11Q8TEB1 546 aa10.58□□□□□ -0.72
RBM39-239ENST00000494274 MYO5BQ9ULV0 1848 aa10.58□□□□□ -0.72
RBM39-239ENST00000494274 NWD1Q149M9 1564 aa10.57□□□□□ -0.72
RBM39-239ENST00000494274 BRINP3Q76B58 766 aa10.57□□□□□ -0.72
RBM39-239ENST00000494274 WAPLQ7Z5K2 1190 aa10.57□□□□□ -0.72
RBM39-239ENST00000494274 DIP2AQ14689 1571 aa10.56□□□□□ -0.72
RBM39-239ENST00000494274 SETBP1Q9Y6X0 1596 aa10.56□□□□□ -0.72
RBM39-239ENST00000494274 ROBO2Q9HCK4 1378 aa10.56□□□□□ -0.72
RBM39-239ENST00000494274 C14orf93Q9H972 538 aaKnown RBP10.56□□□□□ -0.72
RBM39-239ENST00000494274 NUTM2FA1L443 756 aa10.54□□□□□ -0.72
RBM39-239ENST00000494274 DDX17Q92841 729 aaKnown RBP10.54□□□□□ -0.72
RBM39-239ENST00000494274 ORAI2Q96SN7 254 aa10.54□□□□□ -0.72
RBM39-239ENST00000494274 SAFB2Q14151 953 aaKnown RBP eCLIP10.53□□□□□ -0.72
RBM39-239ENST00000494274 NRXN3Q9Y4C0 1643 aa10.53□□□□□ -0.72
RBM39-239ENST00000494274 DHX57Q6P158 1386 aaKnown RBP10.52□□□□□ -0.72
RBM39-239ENST00000494274 CHD2O14647 1828 aaKnown RBP10.52□□□□□ -0.73
RBM39-239ENST00000494274 ESCO1Q5FWF5 840 aa10.52□□□□□ -0.73
RBM39-239ENST00000494274 LRPPRCP42704 1394 aaKnown RBP10.52□□□□□ -0.73
RBM39-239ENST00000494274 ABCC11Q96J66 1382 aa10.52□□□□□ -0.73
RBM39-239ENST00000494274 KIF1BO60333 1816 aa10.51□□□□□ -0.73
RBM39-239ENST00000494274 ADGRL3Q9HAR2 1447 aa10.51□□□□□ -0.73
RBM39-239ENST00000494274 NUTM2BA6NNL0 878 aaPredicted RBP10.51□□□□□ -0.73
RBM39-239ENST00000494274 NUTM2EB1AL46 878 aaPredicted RBP10.51□□□□□ -0.73
RBM39-239ENST00000494274 NUTM2AQ8IVF1 878 aaPredicted RBP10.51□□□□□ -0.73
RBM39-239ENST00000494274 LRRC59Q96AG4 307 aaKnown RBP10.51□□□□□ -0.73
RBM39-239ENST00000494274 POGKQ9P215 609 aa10.51□□□□□ -0.73
RBM39-239ENST00000494274 TRAK1Q9UPV9 953 aa10.51□□□□□ -0.73
RBM39-239ENST00000494274 XIRP1Q702N8 1843 aaKnown RBP10.51□□□□□ -0.73
RBM39-239ENST00000494274 JCADQ9P266 1359 aa10.51□□□□□ -0.73
RBM39-239ENST00000494274 DCCP43146 1447 aa10.5□□□□□ -0.73
RBM39-239ENST00000494274 NEUROD1Q13562 356 aa10.5□□□□□ -0.73
RBM39-239ENST00000494274 MEX3CQ5U5Q3 659 aaKnown RBP10.5□□□□□ -0.73
RBM39-239ENST00000494274 STAC3Q96MF2 364 aa10.5□□□□□ -0.73
RBM39-239ENST00000494274 PRAM1Q96QH2 718 aa10.5□□□□□ -0.73
RBM39-239ENST00000494274 PLEKHH1Q9ULM0 1364 aa10.5□□□□□ -0.73
RBM39-239ENST00000494274 PIK3C2GO75747 1445 aa10.5□□□□□ -0.73
RBM39-239ENST00000494274 MST1RQ04912 1400 aa10.5□□□□□ -0.73
RBM39-239ENST00000494274 PTCH1Q13635 1447 aa10.5□□□□□ -0.73
RBM39-239ENST00000494274 SOCS7O14512 581 aa10.49□□□□□ -0.73
RBM39-239ENST00000494274 SIRT1Q96EB6 747 aa10.49□□□□□ -0.73
RBM39-239ENST00000494274 SIN3AQ96ST3 1273 aa10.49□□□□□ -0.73
RBM39-239ENST00000494274 RGS17Q9UGC6 210 aaPredicted RBP10.49□□□□□ -0.73
RBM39-239ENST00000494274 YTHDC2Q9H6S0 1430 aaKnown RBP10.49□□□□□ -0.73
RBM39-239ENST00000494274 ROBO1Q9Y6N7 1651 aa10.48□□□□□ -0.73
RBM39-239ENST00000494274 FOXO3O43524 673 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms