RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 AXIN1O15169 862 aa11.62□□□□□ -0.55
SYCP1-208ENST00000493377 NKX1-1Q15270 411 aaPredicted RBP11.62□□□□□ -0.55
SYCP1-208ENST00000493377 CTC1Q2NKJ3 1217 aa11.62□□□□□ -0.55
SYCP1-208ENST00000493377 CERKQ8TCT0 537 aa11.62□□□□□ -0.55
SYCP1-208ENST00000493377 PRR14Q9BWN1 585 aa11.62□□□□□ -0.55
SYCP1-208ENST00000493377 TERTO14746 1132 aaKnown RBP11.61□□□□□ -0.55
SYCP1-208ENST00000493377 SLF2Q8IX21 1173 aa11.61□□□□□ -0.55
SYCP1-208ENST00000493377 DDX12PQ92771 950 aa11.6□□□□□ -0.55
SYCP1-208ENST00000493377 C3orf80F5H4A9 247 aa11.59□□□□□ -0.55
SYCP1-208ENST00000493377 PCDHB3Q9Y5E6 796 aa11.59□□□□□ -0.55
SYCP1-208ENST00000493377 SMCPP49901 116 aaPredicted RBP11.57□□□□□ -0.56
SYCP1-208ENST00000493377 NBR1Q14596 966 aa11.57□□□□□ -0.56
SYCP1-208ENST00000493377 CHGAP10645 457 aaKnown RBP11.56□□□□□ -0.56
SYCP1-208ENST00000493377 PPEF1O14829 653 aaPredicted RBP11.55□□□□□ -0.56
SYCP1-208ENST00000493377 PKD2L1Q9P0L9 805 aa11.55□□□□□ -0.56
SYCP1-208ENST00000493377 S1PR4O95977 384 aa11.54□□□□□ -0.56
SYCP1-208ENST00000493377 SLC4A3P48751 1232 aa11.54□□□□□ -0.56
SYCP1-208ENST00000493377 NUDT18Q6ZVK8 323 aa11.54□□□□□ -0.56
SYCP1-208ENST00000493377 DPYSL4O14531 572 aa11.53□□□□□ -0.56
SYCP1-208ENST00000493377 TLL1O43897 1013 aa11.52□□□□□ -0.57
SYCP1-208ENST00000493377 BLOC1S3Q6QNY0 202 aa11.52□□□□□ -0.57
SYCP1-208ENST00000493377 CAMK2BQ13554 666 aa11.51□□□□□ -0.57
SYCP1-208ENST00000493377 SWT1Q5T5J6 900 aaKnown RBP11.51□□□□□ -0.57
SYCP1-208ENST00000493377 FOXC1Q12948 553 aa11.5□□□□□ -0.57
SYCP1-208ENST00000493377 ZSCAN1Q8NBB4 408 aa11.5□□□□□ -0.57
SYCP1-208ENST00000493377 TOR4AQ9NXH8 423 aa11.5□□□□□ -0.57
SYCP1-208ENST00000493377 RBM27Q9P2N5 1060 aaKnown RBP11.49□□□□□ -0.57
SYCP1-208ENST00000493377 SENP2Q9HC62 589 aa11.45□□□□□ -0.58
SYCP1-208ENST00000493377 SNRPBP14678 240 aaKnown RBP11.44□□□□□ -0.58
SYCP1-208ENST00000493377 LORP23490 312 aaPredicted RBP11.44□□□□□ -0.58
SYCP1-208ENST00000493377 PLA2G2CQ5R387 149 aa11.44□□□□□ -0.58
SYCP1-208ENST00000493377 CYP4X1Q8N118 509 aa11.44□□□□□ -0.58
SYCP1-208ENST00000493377 TRIM47Q96LD4 638 aa11.44□□□□□ -0.58
SYCP1-208ENST00000493377 SLC16A10Q8TF71 515 aa11.43□□□□□ -0.58
SYCP1-208ENST00000493377 ADH1BP00325 375 aa11.42□□□□□ -0.58
SYCP1-208ENST00000493377 ATP13A2Q9NQ11 1180 aa11.42□□□□□ -0.58
SYCP1-208ENST00000493377 SLC6A16Q9GZN6 736 aa11.38□□□□□ -0.59
SYCP1-208ENST00000493377 RPIAP49247 311 aa11.37□□□□□ -0.59
SYCP1-208ENST00000493377 KIFC2Q96AC6 838 aa11.37□□□□□ -0.59
SYCP1-208ENST00000493377 PDIA6Q15084 440 aa11.36□□□□□ -0.59
SYCP1-208ENST00000493377 GMPRP36959 345 aa11.35□□□□□ -0.59
SYCP1-208ENST00000493377 GTPBP6O43824 516 aaPredicted RBP11.34□□□□□ -0.59
SYCP1-208ENST00000493377 ACTN4O43707 911 aaKnown RBP11.33□□□□□ -0.6
SYCP1-208ENST00000493377 TTC13Q8NBP0 860 aa11.33□□□□□ -0.6
SYCP1-208ENST00000493377 IRF7Q92985 503 aa11.32□□□□□ -0.6
SYCP1-208ENST00000493377 CD2BP2O95400 341 aaKnown RBP11.31□□□□□ -0.6
SYCP1-208ENST00000493377 KMT5BQ4FZB7 885 aa11.31□□□□□ -0.6
SYCP1-208ENST00000493377 SPDYE16A6NNV3 312 aaPredicted RBP11.3□□□□□ -0.6
SYCP1-208ENST00000493377 NR1I2O75469 434 aa11.3□□□□□ -0.6
SYCP1-208ENST00000493377 NPAS3Q8IXF0 933 aa11.3□□□□□ -0.6
SYCP1-208ENST00000493377 TTC24A2A3L6 582 aaPredicted RBP11.29□□□□□ -0.6
SYCP1-208ENST00000493377 PRIM1P49642 420 aaKnown RBP11.29□□□□□ -0.6
SYCP1-208ENST00000493377 NXF1Q9UBU9 619 aaKnown RBP11.29□□□□□ -0.6
SYCP1-208ENST00000493377 CDHR5Q9HBB8 845 aa11.27□□□□□ -0.61
SYCP1-208ENST00000493377 CADPS2Q86UW7 1296 aa11.26□□□□□ -0.61
SYCP1-208ENST00000493377 KCTD17Q8N5Z5 321 aa11.26□□□□□ -0.61
SYCP1-208ENST00000493377 EYA1Q99502 592 aa11.26□□□□□ -0.61
SYCP1-208ENST00000493377 KCNMA1Q12791 1236 aa11.25□□□□□ -0.61
SYCP1-208ENST00000493377 PADI6Q6TGC4 694 aa11.24□□□□□ -0.61
SYCP1-208ENST00000493377 SMPD1P17405 629 aa11.22□□□□□ -0.61
SYCP1-208ENST00000493377 CFHP08603 1231 aa11.19□□□□□ -0.62
SYCP1-208ENST00000493377 SNIP1Q8TAD8 396 aaKnown RBP11.19□□□□□ -0.62
SYCP1-208ENST00000493377 GRXCR2A6NFK2 248 aa11.17□□□□□ -0.62
SYCP1-208ENST00000493377 H3BM21 787 aa11.17□□□□□ -0.62
SYCP1-208ENST00000493377 DNAJB2P25686 324 aa11.17□□□□□ -0.62
SYCP1-208ENST00000493377 SPSB2Q99619 263 aa11.17□□□□□ -0.62
SYCP1-208ENST00000493377 GSK3AP49840 483 aa11.15□□□□□ -0.62
SYCP1-208ENST00000493377 SCUBE3Q8IX30 993 aa11.15□□□□□ -0.62
SYCP1-208ENST00000493377 FCF1Q9Y324 198 aaKnown RBP11.15□□□□□ -0.62
SYCP1-208ENST00000493377 WNT7AO00755 349 aa11.14□□□□□ -0.63
SYCP1-208ENST00000493377 OSBPP22059 807 aa11.14□□□□□ -0.63
SYCP1-208ENST00000493377 TMEM134Q9H6X4 195 aa11.13□□□□□ -0.63
SYCP1-208ENST00000493377 NPDC1Q9NQX5 325 aaPredicted RBP11.13□□□□□ -0.63
SYCP1-208ENST00000493377 TMEM151AQ8N4L1 468 aa11.12□□□□□ -0.63
SYCP1-208ENST00000493377 ERBB4Q15303 1308 aa11.11□□□□□ -0.63
SYCP1-208ENST00000493377 XP32Q5T750 250 aa11.09□□□□□ -0.63
SYCP1-208ENST00000493377 J3QL48 77 aa11.08□□□□□ -0.64
SYCP1-208ENST00000493377 HPS1Q92902 700 aa11.08□□□□□ -0.64
SYCP1-208ENST00000493377 ZBTB24O43167 697 aaPredicted RBP11.07□□□□□ -0.64
SYCP1-208ENST00000493377 GDF11O95390 407 aa11.06□□□□□ -0.64
SYCP1-208ENST00000493377 VEGFBP49765 207 aa11.06□□□□□ -0.64
SYCP1-208ENST00000493377 RASSF7Q02833 373 aa11.03□□□□□ -0.64
SYCP1-208ENST00000493377 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
SYCP1-208ENST00000493377 MRGPRX2Q96LB1 330 aa11.03□□□□□ -0.64
SYCP1-208ENST00000493377 KRTAP4-8Q9BYQ9 185 aa11.03□□□□□ -0.64
SYCP1-208ENST00000493377 SLC10A3P09131 477 aa11.02□□□□□ -0.65
SYCP1-208ENST00000493377 REPIN1Q9BWE0 567 aaKnown RBP11.02□□□□□ -0.65
SYCP1-208ENST00000493377 RNF225M0QZC1 329 aaPredicted RBP11.01□□□□□ -0.65
SYCP1-208ENST00000493377 ARIH1Q9Y4X5 557 aaPredicted RBP11□□□□□ -0.65
SYCP1-208ENST00000493377 PUS10Q3MIT2 529 aaKnown RBP10.99□□□□□ -0.65
SYCP1-208ENST00000493377 IGHA1P01876 353 aa10.97□□□□□ -0.65
SYCP1-208ENST00000493377 VSIG8P0DPA2 414 aa10.97□□□□□ -0.65
SYCP1-208ENST00000493377 RCCD1A6NED2 376 aa10.96□□□□□ -0.65
SYCP1-208ENST00000493377 TRIM32Q13049 653 aa10.96□□□□□ -0.65
SYCP1-208ENST00000493377 THAP11Q96EK4 314 aa10.96□□□□□ -0.65
SYCP1-208ENST00000493377 FAM160A2Q8N612 972 aaPredicted RBP10.94□□□□□ -0.66
SYCP1-208ENST00000493377 ADGRG1Q9Y653 693 aa10.93□□□□□ -0.66
SYCP1-208ENST00000493377 FMNL1O95466 1100 aaPredicted RBP10.92□□□□□ -0.66
SYCP1-208ENST00000493377 TRIM46Q7Z4K8 759 aa10.92□□□□□ -0.66
SYCP1-208ENST00000493377 BMP1P13497 986 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms