RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 PYGBP11216 843 aa11.65□□□□□ -0.54
SPTA1-208ENST00000492934 KIAA1107Q9UPP5 1409 aa11.65□□□□□ -0.54
SPTA1-208ENST00000492934 CLTCQ00610 1675 aaKnown RBP11.65□□□□□ -0.55
SPTA1-208ENST00000492934 MYO3AQ8NEV4 1616 aa11.64□□□□□ -0.55
SPTA1-208ENST00000492934 A2MP01023 1474 aa11.64□□□□□ -0.55
SPTA1-208ENST00000492934 NCOA1Q15788 1441 aa11.64□□□□□ -0.55
SPTA1-208ENST00000492934 CFDP1Q9UEE9 299 aaPredicted RBP11.64□□□□□ -0.55
SPTA1-208ENST00000492934 PTPRTO14522 1441 aa11.63□□□□□ -0.55
SPTA1-208ENST00000492934 NPATQ14207 1427 aa11.63□□□□□ -0.55
SPTA1-208ENST00000492934 HNRNPMP52272 730 aaKnown RBP eCLIP11.63□□□□□ -0.55
SPTA1-208ENST00000492934 ZNF142P52746 1687 aaPredicted RBP11.62□□□□□ -0.55
SPTA1-208ENST00000492934 ADGBQ8N7X0 1667 aa11.62□□□□□ -0.55
SPTA1-208ENST00000492934 CEP162Q5TB80 1403 aa11.62□□□□□ -0.55
SPTA1-208ENST00000492934 CAMSAP1Q5T5Y3 1602 aa11.62□□□□□ -0.55
SPTA1-208ENST00000492934 KLHL34Q8N239 644 aa11.62□□□□□ -0.55
SPTA1-208ENST00000492934 PCDHB8Q9UN66 801 aa11.62□□□□□ -0.55
SPTA1-208ENST00000492934 SETD1BQ9UPS6 1966 aaKnown RBP11.6□□□□□ -0.55
SPTA1-208ENST00000492934 CEP170BQ9Y4F5 1589 aaPredicted RBP11.6□□□□□ -0.55
SPTA1-208ENST00000492934 ZMYM3Q14202 1370 aa11.59□□□□□ -0.55
SPTA1-208ENST00000492934 C3orf67Q6ZVT6 689 aa11.59□□□□□ -0.55
SPTA1-208ENST00000492934 MBD5Q9P267 1494 aa11.58□□□□□ -0.56
SPTA1-208ENST00000492934 LTBP4Q8N2S1 1624 aa11.58□□□□□ -0.56
SPTA1-208ENST00000492934 EMP3P54852 163 aa11.58□□□□□ -0.56
SPTA1-208ENST00000492934 PDCD7Q8N8D1 485 aaKnown RBP11.58□□□□□ -0.56
SPTA1-208ENST00000492934 L3MBTL3Q96JM7 780 aaPredicted RBP11.58□□□□□ -0.56
SPTA1-208ENST00000492934 ZNF644Q9H582 1327 aaPredicted RBP11.58□□□□□ -0.56
SPTA1-208ENST00000492934 CAMSAP2Q08AD1 1489 aa11.57□□□□□ -0.56
SPTA1-208ENST00000492934 CCDC141Q6ZP82 1450 aa11.57□□□□□ -0.56
SPTA1-208ENST00000492934 PTPRKQ15262 1439 aa11.57□□□□□ -0.56
SPTA1-208ENST00000492934 PLA2R1Q13018 1463 aa11.57□□□□□ -0.56
SPTA1-208ENST00000492934 NCOA2Q15596 1464 aa11.57□□□□□ -0.56
SPTA1-208ENST00000492934 GGT6Q6P531 493 aa11.56□□□□□ -0.56
SPTA1-208ENST00000492934 IQSEC2Q5JU85 1478 aa11.56□□□□□ -0.56
SPTA1-208ENST00000492934 RTEL1-TNFRSF6BF6WH68 1400 aa11.55□□□□□ -0.56
SPTA1-208ENST00000492934 KDM5DQ9BY66 1539 aa11.55□□□□□ -0.56
SPTA1-208ENST00000492934 SPATA31D1Q6ZQQ2 1576 aa11.54□□□□□ -0.56
SPTA1-208ENST00000492934 TCOF1Q13428 1488 aaKnown RBP11.54□□□□□ -0.56
SPTA1-208ENST00000492934 FAM135AQ9P2D6 1515 aa11.54□□□□□ -0.56
SPTA1-208ENST00000492934 GOLGA2Q08379 1002 aa11.53□□□□□ -0.56
SPTA1-208ENST00000492934 MKRN3Q13064 507 aaKnown RBP11.53□□□□□ -0.56
SPTA1-208ENST00000492934 A2ML1A8K2U0 1454 aa11.52□□□□□ -0.56
SPTA1-208ENST00000492934 ZNF467Q7Z7K2 595 aaPredicted RBP11.52□□□□□ -0.57
SPTA1-208ENST00000492934 IFNLR1Q8IU57 520 aaPredicted RBP11.52□□□□□ -0.57
SPTA1-208ENST00000492934 HS3ST6Q96QI5 342 aa11.52□□□□□ -0.57
SPTA1-208ENST00000492934 ARHGEF5Q12774 1597 aa11.52□□□□□ -0.57
SPTA1-208ENST00000492934 NCKAP5LQ9HCH0 1330 aa11.52□□□□□ -0.57
SPTA1-208ENST00000492934 DHX29Q7Z478 1369 aaKnown RBP11.52□□□□□ -0.57
SPTA1-208ENST00000492934 DISP3Q9P2K9 1392 aa11.52□□□□□ -0.57
SPTA1-208ENST00000492934 KRTAP3-3Q9BYR6 98 aa11.51□□□□□ -0.57
SPTA1-208ENST00000492934 KRTAP3-2Q9BYR7 98 aa11.51□□□□□ -0.57
SPTA1-208ENST00000492934 ZNF335Q9H4Z2 1342 aaPredicted RBP11.51□□□□□ -0.57
SPTA1-208ENST00000492934 PZPP20742 1482 aa11.51□□□□□ -0.57
SPTA1-208ENST00000492934 DNMT1P26358 1616 aaKnown RBP11.5□□□□□ -0.57
SPTA1-208ENST00000492934 POLR1AO95602 1720 aaPredicted RBP11.5□□□□□ -0.57
SPTA1-208ENST00000492934 VPS8Q8N3P4 1428 aa11.5□□□□□ -0.57
SPTA1-208ENST00000492934 POTEB3A0JP26 581 aa11.49□□□□□ -0.57
SPTA1-208ENST00000492934 FAM205CA6NFA0 338 aa11.49□□□□□ -0.57
SPTA1-208ENST00000492934 PKD2Q13563 968 aa11.49□□□□□ -0.57
SPTA1-208ENST00000492934 POTEBQ6S5H4 581 aa11.49□□□□□ -0.57
SPTA1-208ENST00000492934 SPOCK2Q92563 424 aa11.49□□□□□ -0.57
SPTA1-208ENST00000492934 TNRQ92752 1358 aa11.49□□□□□ -0.57
SPTA1-208ENST00000492934 LRRC9Q6ZRR7 1453 aa11.49□□□□□ -0.57
SPTA1-208ENST00000492934 KIF3BO15066 747 aa11.48□□□□□ -0.57
SPTA1-208ENST00000492934 GSE1Q14687 1217 aa11.48□□□□□ -0.57
SPTA1-208ENST00000492934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.48□□□□□ -0.57
SPTA1-208ENST00000492934 NEURL4Q96JN8 1562 aa11.48□□□□□ -0.57
SPTA1-208ENST00000492934 RNF17Q9BXT8 1623 aaKnown RBP11.47□□□□□ -0.57
SPTA1-208ENST00000492934 ZC3H13Q5T200 1668 aaKnown RBP11.46□□□□□ -0.57
SPTA1-208ENST00000492934 MAST1Q9Y2H9 1570 aa11.46□□□□□ -0.57
SPTA1-208ENST00000492934 EIF2AK4Q9P2K8 1649 aaKnown RBP11.45□□□□□ -0.58
SPTA1-208ENST00000492934 ABCC3O15438 1527 aa11.45□□□□□ -0.58
SPTA1-208ENST00000492934 NLRP1Q9C000 1473 aa11.44□□□□□ -0.58
SPTA1-208ENST00000492934 WASHC2CQ9Y4E1 1318 aa11.44□□□□□ -0.58
SPTA1-208ENST00000492934 UBAP1LF5GYI3 381 aa11.44□□□□□ -0.58
SPTA1-208ENST00000492934 RSPH4AQ5TD94 716 aa11.44□□□□□ -0.58
SPTA1-208ENST00000492934 FBXO31Q5XUX0 539 aaPredicted RBP11.44□□□□□ -0.58
SPTA1-208ENST00000492934 UGGT1Q9NYU2 1555 aa11.44□□□□□ -0.58
SPTA1-208ENST00000492934 CPS1P31327 1500 aa11.43□□□□□ -0.58
SPTA1-208ENST00000492934 MYOM3Q5VTT5 1437 aa11.43□□□□□ -0.58
SPTA1-208ENST00000492934 MROH1Q8NDA8 1641 aa11.42□□□□□ -0.58
SPTA1-208ENST00000492934 MAP3K1Q13233 1512 aa11.42□□□□□ -0.58
SPTA1-208ENST00000492934 TSPY4P0CV99 314 aa11.42□□□□□ -0.58
SPTA1-208ENST00000492934 TSPY10P0CW01 314 aa11.42□□□□□ -0.58
SPTA1-208ENST00000492934 CHRM1P11229 460 aaPredicted RBP11.42□□□□□ -0.58
SPTA1-208ENST00000492934 ILDR2Q71H61 639 aa11.42□□□□□ -0.58
SPTA1-208ENST00000492934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.41□□□□□ -0.58
SPTA1-208ENST00000492934 ERVK-7P63135 1459 aa11.41□□□□□ -0.58
SPTA1-208ENST00000492934 PSEN1P49768 467 aa11.41□□□□□ -0.58
SPTA1-208ENST00000492934 DEPDC5O75140 1603 aa11.41□□□□□ -0.58
SPTA1-208ENST00000492934 MIA2Q96PC5 1412 aa11.41□□□□□ -0.58
SPTA1-208ENST00000492934 CEP152O94986 1710 aa11.4□□□□□ -0.58
SPTA1-208ENST00000492934 CROCC2H7BZ55 1655 aa11.4□□□□□ -0.58
SPTA1-208ENST00000492934 SHANK2Q9UPX8 1470 aa11.4□□□□□ -0.58
SPTA1-208ENST00000492934 VWDEQ8N2E2 1590 aa11.4□□□□□ -0.58
SPTA1-208ENST00000492934 IQGAP1P46940 1657 aa11.4□□□□□ -0.59
SPTA1-208ENST00000492934 NPHP4O75161 1426 aaPredicted RBP11.39□□□□□ -0.59
SPTA1-208ENST00000492934 PRDM15P57071 1507 aaPredicted RBP11.39□□□□□ -0.59
SPTA1-208ENST00000492934 DUOX2Q9NRD8 1548 aa11.39□□□□□ -0.59
SPTA1-208ENST00000492934 MED14O60244 1454 aa11.38□□□□□ -0.59
SPTA1-208ENST00000492934 LOC105371045A0A1W2PR82 267 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms