RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 PRR29P0C7W0 189 aa15.31■□□□□ 0.04
TNFRSF9-203ENST00000492571 BCANQ96GW7 911 aa15.31■□□□□ 0.04
TNFRSF9-203ENST00000492571 KANK1Q14678 1352 aa15.31■□□□□ 0.04
TNFRSF9-203ENST00000492571 MYOM3Q5VTT5 1437 aa15.31■□□□□ 0.04
TNFRSF9-203ENST00000492571 SYNMO15061 1565 aa15.31■□□□□ 0.04
TNFRSF9-203ENST00000492571 ZC3H13Q5T200 1668 aaKnown RBP15.3■□□□□ 0.04
TNFRSF9-203ENST00000492571 RRP7BPQ9NSQ0 103 aa15.3■□□□□ 0.04
TNFRSF9-203ENST00000492571 ALKQ9UM73 1620 aa15.29■□□□□ 0.04
TNFRSF9-203ENST00000492571 LRRC9Q6ZRR7 1453 aa15.29■□□□□ 0.04
TNFRSF9-203ENST00000492571 FAM135BQ49AJ0 1406 aa15.29■□□□□ 0.04
TNFRSF9-203ENST00000492571 KCNA6P17658 529 aa15.29■□□□□ 0.04
TNFRSF9-203ENST00000492571 PROSER2Q86WR7 435 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF9-203ENST00000492571 RGS17Q9UGC6 210 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF9-203ENST00000492571 DUOX2Q9NRD8 1548 aa15.27■□□□□ 0.04
TNFRSF9-203ENST00000492571 ARHGAP31Q2M1Z3 1444 aa15.27■□□□□ 0.04
TNFRSF9-203ENST00000492571 KIF15Q9NS87 1388 aa15.27■□□□□ 0.04
TNFRSF9-203ENST00000492571 TMEM2Q9UHN6 1383 aa15.27■□□□□ 0.04
TNFRSF9-203ENST00000492571 MAST1Q9Y2H9 1570 aa15.27■□□□□ 0.03
TNFRSF9-203ENST00000492571 EIF2AK4Q9P2K8 1649 aaKnown RBP15.26■□□□□ 0.03
TNFRSF9-203ENST00000492571 SLC26A8Q96RN1 970 aa15.26■□□□□ 0.03
TNFRSF9-203ENST00000492571 ARHGAP23Q9P227 1491 aa15.26■□□□□ 0.03
TNFRSF9-203ENST00000492571 TMEM94Q12767 1356 aa15.25■□□□□ 0.03
TNFRSF9-203ENST00000492571 HDGFP51858 240 aaKnown RBP15.25■□□□□ 0.03
TNFRSF9-203ENST00000492571 KANK4Q5T7N3 995 aaPredicted RBP15.25■□□□□ 0.03
TNFRSF9-203ENST00000492571 SLIT1O75093 1534 aa15.25■□□□□ 0.03
TNFRSF9-203ENST00000492571 SPDYE4A6NLX3 237 aa15.24■□□□□ 0.03
TNFRSF9-203ENST00000492571 IDI1Q13907 227 aa15.24■□□□□ 0.03
TNFRSF9-203ENST00000492571 VPS8Q8N3P4 1428 aa15.24■□□□□ 0.03
TNFRSF9-203ENST00000492571 ERBINQ96RT1 1412 aa15.24■□□□□ 0.03
TNFRSF9-203ENST00000492571 POTEAQ6S8J7 498 aa15.23■□□□□ 0.03
TNFRSF9-203ENST00000492571 STRCP1A6NGW2 1772 aa15.22■□□□□ 0.03
TNFRSF9-203ENST00000492571 SLC52A1Q9NWF4 448 aa15.22■□□□□ 0.03
TNFRSF9-203ENST00000492571 UBR1Q8IWV7 1749 aa15.22■□□□□ 0.03
TNFRSF9-203ENST00000492571 MSH6P52701 1360 aa15.22■□□□□ 0.03
TNFRSF9-203ENST00000492571 RBM33Q96EV2 1170 aaKnown RBP15.21■□□□□ 0.03
TNFRSF9-203ENST00000492571 SLAIN2Q9P270 581 aa15.21■□□□□ 0.03
TNFRSF9-203ENST00000492571 PPP1R15AO75807 674 aaPredicted RBP15.2■□□□□ 0.02
TNFRSF9-203ENST00000492571 ANKRD30AQ9BXX3 1397 aa15.19■□□□□ 0.02
TNFRSF9-203ENST00000492571 EFCAB6Q5THR3 1501 aa15.18■□□□□ 0.02
TNFRSF9-203ENST00000492571 MROH1Q8NDA8 1641 aa15.18■□□□□ 0.02
TNFRSF9-203ENST00000492571 C19orf67A6NJJ6 358 aa15.18■□□□□ 0.02
TNFRSF9-203ENST00000492571 C14orf37Q86TY3 774 aa15.18■□□□□ 0.02
TNFRSF9-203ENST00000492571 CHIC2Q9UKJ5 165 aa15.18■□□□□ 0.02
TNFRSF9-203ENST00000492571 MAP3K1Q13233 1512 aa15.17■□□□□ 0.02
TNFRSF9-203ENST00000492571 CFAP65Q6ZU64 1925 aaKnown RBP15.17■□□□□ 0.02
TNFRSF9-203ENST00000492571 CEP152O94986 1710 aa15.17■□□□□ 0.02
TNFRSF9-203ENST00000492571 PRDM15P57071 1507 aaPredicted RBP15.17■□□□□ 0.02
TNFRSF9-203ENST00000492571 ABCC5O15440 1437 aa15.17■□□□□ 0.02
TNFRSF9-203ENST00000492571 JCADQ9P266 1359 aa15.16■□□□□ 0.02
TNFRSF9-203ENST00000492571 LOC105371045A0A1W2PR82 267 aa15.16■□□□□ 0.02
TNFRSF9-203ENST00000492571 MEX3CQ5U5Q3 659 aaKnown RBP15.16■□□□□ 0.02
TNFRSF9-203ENST00000492571 ZNF772Q68DY9 489 aaPredicted RBP15.14■□□□□ 0.01
TNFRSF9-203ENST00000492571 PIK3C2BO00750 1634 aa15.14■□□□□ 0.01
TNFRSF9-203ENST00000492571 DAPK1P53355 1430 aa15.13■□□□□ 0.01
TNFRSF9-203ENST00000492571 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.13■□□□□ 0.01
TNFRSF9-203ENST00000492571 NKTRP30414 1462 aaKnown RBP15.13■□□□□ 0.01
TNFRSF9-203ENST00000492571 ATF3P18847 181 aa15.12■□□□□ 0.01
TNFRSF9-203ENST00000492571 CHGAP10645 457 aaKnown RBP15.11■□□□□ 0.01
TNFRSF9-203ENST00000492571 CADPS2Q86UW7 1296 aa15.11■□□□□ 0.01
TNFRSF9-203ENST00000492571 SPATA31A6Q5VVP1 1343 aa15.11■□□□□ 0.01
TNFRSF9-203ENST00000492571 ROBO1Q9Y6N7 1651 aa15.1■□□□□ 0.01
TNFRSF9-203ENST00000492571 TBX22Q9Y458 520 aa15.1■□□□□ 0.01
TNFRSF9-203ENST00000492571 LMTK2Q8IWU2 1503 aa15.1■□□□□ 0.01
TNFRSF9-203ENST00000492571 TET3O43151 1660 aa15.09■□□□□ 0.01
TNFRSF9-203ENST00000492571 KDM5AP29375 1690 aaKnown RBP15.09■□□□□ 0.01
TNFRSF9-203ENST00000492571 PLEKHG1Q9ULL1 1385 aa15.09■□□□□ 0.01
TNFRSF9-203ENST00000492571 NOS1P29475 1434 aa15.09■□□□□ 0.01
TNFRSF9-203ENST00000492571 FAM50AQ14320 339 aaKnown RBP15.08■□□□□ 0
TNFRSF9-203ENST00000492571 C19orf44Q9H6X5 657 aa15.08■□□□□ 0
TNFRSF9-203ENST00000492571 NCOA3Q9Y6Q9 1424 aa15.08■□□□□ 0
TNFRSF9-203ENST00000492571 PTPN23Q9H3S7 1636 aa15.07■□□□□ 0
TNFRSF9-203ENST00000492571 XIRP1Q702N8 1843 aaKnown RBP15.07■□□□□ 0
TNFRSF9-203ENST00000492571 FGD6Q6ZV73 1430 aa15.07■□□□□ 0
TNFRSF9-203ENST00000492571 RXRBP28702 533 aa15.06■□□□□ 0
TNFRSF9-203ENST00000492571 TRIM52Q96A61 297 aa15.06■□□□□ 0
TNFRSF9-203ENST00000492571 FARP1Q9Y4F1 1045 aaPredicted RBP15.06■□□□□ 0
TNFRSF9-203ENST00000492571 ADGRB3O60242 1522 aa15.06■□□□□ 0
TNFRSF9-203ENST00000492571 RIMS2Q9UQ26 1411 aa15.05■□□□□ -0
TNFRSF9-203ENST00000492571 RPRD2Q5VT52 1461 aaKnown RBP15.05■□□□□ -0
TNFRSF9-203ENST00000492571 UPF1Q92900 1129 aaKnown RBP eCLIP15.03■□□□□ -0
TNFRSF9-203ENST00000492571 NWD1Q149M9 1564 aa15.02■□□□□ -0
TNFRSF9-203ENST00000492571 ANKRD50Q9ULJ7 1429 aa15.02■□□□□ -0
TNFRSF9-203ENST00000492571 NUTM2BA6NNL0 878 aaPredicted RBP15.02■□□□□ -0
TNFRSF9-203ENST00000492571 NUTM2EB1AL46 878 aaPredicted RBP15.02■□□□□ -0
TNFRSF9-203ENST00000492571 NUTM2AQ8IVF1 878 aaPredicted RBP15.02■□□□□ -0
TNFRSF9-203ENST00000492571 PHLPP1O60346 1717 aa15.02□□□□□ -0.01
TNFRSF9-203ENST00000492571 PIK3R4Q99570 1358 aa15.01□□□□□ -0.01
TNFRSF9-203ENST00000492571 CROCC2H7BZ55 1655 aa15.01□□□□□ -0.01
TNFRSF9-203ENST00000492571 NUTM2DQ5VT03 806 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF9-203ENST00000492571 CREBZFQ9NS37 354 aa15.01□□□□□ -0.01
TNFRSF9-203ENST00000492571 ZFYVE9O95405 1425 aa15□□□□□ -0.01
TNFRSF9-203ENST00000492571 AMOTL2Q9Y2J4 779 aa15□□□□□ -0.01
TNFRSF9-203ENST00000492571 LRRC59Q96AG4 307 aaKnown RBP14.98□□□□□ -0.01
TNFRSF9-203ENST00000492571 ADGRL2O95490 1459 aa14.97□□□□□ -0.01
TNFRSF9-203ENST00000492571 BRINP3Q76B58 766 aa14.97□□□□□ -0.01
TNFRSF9-203ENST00000492571 AFF2P51816 1311 aa14.94□□□□□ -0.02
TNFRSF9-203ENST00000492571 GABBR2O75899 941 aa14.94□□□□□ -0.02
TNFRSF9-203ENST00000492571 ZNF326Q5BKZ1 582 aaKnown RBP14.94□□□□□ -0.02
TNFRSF9-203ENST00000492571 COL16A1Q07092 1604 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF9-203ENST00000492571 LRP6O75581 1613 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms