RNA–Protein interactions for RNA: ENST00000492403.1

EPHB4-208, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-208ENST00000492403 ZEB1P37275 1124 aaPredicted RBP15.43■□□□□ 0.06
EPHB4-208ENST00000492403 ZMYM3Q14202 1370 aa15.43■□□□□ 0.06
EPHB4-208ENST00000492403 CLTCQ00610 1675 aaKnown RBP15.42■□□□□ 0.06
EPHB4-208ENST00000492403 NCOA2Q15596 1464 aa15.42■□□□□ 0.06
EPHB4-208ENST00000492403 AKT1S1Q96B36 256 aa15.42■□□□□ 0.06
EPHB4-208ENST00000492403 RTEL1-TNFRSF6BF6WH68 1400 aa15.41■□□□□ 0.06
EPHB4-208ENST00000492403 NPATQ14207 1427 aa15.41■□□□□ 0.06
EPHB4-208ENST00000492403 VPS8Q8N3P4 1428 aa15.41■□□□□ 0.06
EPHB4-208ENST00000492403 PDAP1Q13442 181 aaKnown RBP15.4■□□□□ 0.06
EPHB4-208ENST00000492403 CCDC141Q6ZP82 1450 aa15.4■□□□□ 0.06
EPHB4-208ENST00000492403 KIF3BO15066 747 aa15.39■□□□□ 0.05
EPHB4-208ENST00000492403 CAMSAP2Q08AD1 1489 aa15.39■□□□□ 0.05
EPHB4-208ENST00000492403 E2F4Q16254 413 aa15.37■□□□□ 0.05
EPHB4-208ENST00000492403 DHX29Q7Z478 1369 aaKnown RBP15.36■□□□□ 0.05
EPHB4-208ENST00000492403 PLXNC1O60486 1568 aa15.36■□□□□ 0.05
EPHB4-208ENST00000492403 STRCQ7RTU9 1775 aa15.36■□□□□ 0.05
EPHB4-208ENST00000492403 MBD5Q9P267 1494 aa15.36■□□□□ 0.05
EPHB4-208ENST00000492403 TESPA1A2RU30 521 aaPredicted RBP15.36■□□□□ 0.05
EPHB4-208ENST00000492403 WASHC2CQ9Y4E1 1318 aa15.36■□□□□ 0.05
EPHB4-208ENST00000492403 LRRC9Q6ZRR7 1453 aa15.35■□□□□ 0.05
EPHB4-208ENST00000492403 SEMA3EO15041 775 aa15.35■□□□□ 0.05
EPHB4-208ENST00000492403 MFRPQ9BY79 579 aa15.35■□□□□ 0.05
EPHB4-208ENST00000492403 PTPRTO14522 1441 aa15.34■□□□□ 0.05
EPHB4-208ENST00000492403 RBM42Q9BTD8 480 aaKnown RBP15.34■□□□□ 0.05
EPHB4-208ENST00000492403 CAMSAP1Q5T5Y3 1602 aa15.34■□□□□ 0.05
EPHB4-208ENST00000492403 ARHGEF5Q12774 1597 aa15.31■□□□□ 0.04
EPHB4-208ENST00000492403 MYO3AQ8NEV4 1616 aa15.31■□□□□ 0.04
EPHB4-208ENST00000492403 MAP3K1Q13233 1512 aa15.3■□□□□ 0.04
EPHB4-208ENST00000492403 NCOA1Q15788 1441 aa15.3■□□□□ 0.04
EPHB4-208ENST00000492403 NCKAP5LQ9HCH0 1330 aa15.3■□□□□ 0.04
EPHB4-208ENST00000492403 KDM5DQ9BY66 1539 aa15.29■□□□□ 0.04
EPHB4-208ENST00000492403 PTPRKQ15262 1439 aa15.29■□□□□ 0.04
EPHB4-208ENST00000492403 CEP170BQ9Y4F5 1589 aaPredicted RBP15.28■□□□□ 0.04
EPHB4-208ENST00000492403 REM2Q8IYK8 340 aaPredicted RBP15.28■□□□□ 0.04
EPHB4-208ENST00000492403 TSPYL2Q9H2G4 693 aaPredicted RBP15.28■□□□□ 0.04
EPHB4-208ENST00000492403 FAM135AQ9P2D6 1515 aa15.27■□□□□ 0.04
EPHB4-208ENST00000492403 MYOM3Q5VTT5 1437 aa15.27■□□□□ 0.04
EPHB4-208ENST00000492403 MIA2Q96PC5 1412 aa15.27■□□□□ 0.04
EPHB4-208ENST00000492403 TNRQ92752 1358 aa15.27■□□□□ 0.04
EPHB4-208ENST00000492403 KANK4Q5T7N3 995 aaPredicted RBP15.27■□□□□ 0.04
EPHB4-208ENST00000492403 PCDHB8Q9UN66 801 aa15.27■□□□□ 0.04
EPHB4-208ENST00000492403 PCDHB13Q9Y5F0 798 aa15.27■□□□□ 0.04
EPHB4-208ENST00000492403 ZNF142P52746 1687 aaPredicted RBP15.27■□□□□ 0.03
EPHB4-208ENST00000492403 ZMYND10O75800 440 aa15.25■□□□□ 0.03
EPHB4-208ENST00000492403 PSEN1P49768 467 aa15.25■□□□□ 0.03
EPHB4-208ENST00000492403 SMYD5Q6GMV2 418 aa15.25■□□□□ 0.03
EPHB4-208ENST00000492403 THEMISQ8N1K5 641 aaPredicted RBP15.25■□□□□ 0.03
EPHB4-208ENST00000492403 A2ML1A8K2U0 1454 aa15.25■□□□□ 0.03
EPHB4-208ENST00000492403 PLA2R1Q13018 1463 aa15.25■□□□□ 0.03
EPHB4-208ENST00000492403 PPP1R37O75864 691 aa15.24■□□□□ 0.03
EPHB4-208ENST00000492403 FBXO31Q5XUX0 539 aaPredicted RBP15.23■□□□□ 0.03
EPHB4-208ENST00000492403 PZPP20742 1482 aa15.22■□□□□ 0.03
EPHB4-208ENST00000492403 ANKLE2Q86XL3 938 aa15.22■□□□□ 0.03
EPHB4-208ENST00000492403 MAST1Q9Y2H9 1570 aa15.22■□□□□ 0.03
EPHB4-208ENST00000492403 ZC3H13Q5T200 1668 aaKnown RBP15.2■□□□□ 0.02
EPHB4-208ENST00000492403 RRP7BPQ9NSQ0 103 aa15.2■□□□□ 0.02
EPHB4-208ENST00000492403 DNMT1P26358 1616 aaKnown RBP15.2■□□□□ 0.02
EPHB4-208ENST00000492403 KANK1Q14678 1352 aa15.2■□□□□ 0.02
EPHB4-208ENST00000492403 EIF2AK4Q9P2K8 1649 aaKnown RBP15.2■□□□□ 0.02
EPHB4-208ENST00000492403 IQSEC2Q5JU85 1478 aa15.2■□□□□ 0.02
EPHB4-208ENST00000492403 DUOX2Q9NRD8 1548 aa15.19■□□□□ 0.02
EPHB4-208ENST00000492403 PTPN23Q9H3S7 1636 aa15.19■□□□□ 0.02
EPHB4-208ENST00000492403 UBAP1LF5GYI3 381 aa15.19■□□□□ 0.02
EPHB4-208ENST00000492403 NLRP1Q9C000 1473 aa15.19■□□□□ 0.02
EPHB4-208ENST00000492403 ZNF335Q9H4Z2 1342 aaPredicted RBP15.18■□□□□ 0.02
EPHB4-208ENST00000492403 POLR1AO95602 1720 aaPredicted RBP15.18■□□□□ 0.02
EPHB4-208ENST00000492403 NLRP6P59044 892 aa15.18■□□□□ 0.02
EPHB4-208ENST00000492403 UGGT1Q9NYU2 1555 aa15.17■□□□□ 0.02
EPHB4-208ENST00000492403 KIF15Q9NS87 1388 aa15.17■□□□□ 0.02
EPHB4-208ENST00000492403 PPARGC1BQ86YN6 1023 aaKnown RBP15.17■□□□□ 0.02
EPHB4-208ENST00000492403 TCOF1Q13428 1488 aaKnown RBP15.16■□□□□ 0.02
EPHB4-208ENST00000492403 FAM50AQ14320 339 aaKnown RBP15.16■□□□□ 0.02
EPHB4-208ENST00000492403 ZNF579Q8NAF0 562 aaKnown RBP15.16■□□□□ 0.02
EPHB4-208ENST00000492403 LTBP4Q8N2S1 1624 aa15.16■□□□□ 0.02
EPHB4-208ENST00000492403 RNF17Q9BXT8 1623 aaKnown RBP15.16■□□□□ 0.02
EPHB4-208ENST00000492403 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.15■□□□□ 0.02
EPHB4-208ENST00000492403 BARGINQ6ZT62 677 aa15.15■□□□□ 0.02
EPHB4-208ENST00000492403 CHIC2Q9UKJ5 165 aa15.15■□□□□ 0.02
EPHB4-208ENST00000492403 ANKRD30AQ9BXX3 1397 aa15.14■□□□□ 0.01
EPHB4-208ENST00000492403 DISP3Q9P2K9 1392 aa15.14■□□□□ 0.01
EPHB4-208ENST00000492403 FBXO22Q8NEZ5 403 aa15.14■□□□□ 0.01
EPHB4-208ENST00000492403 SHANK2Q9UPX8 1470 aa15.14■□□□□ 0.01
EPHB4-208ENST00000492403 ABCC3O15438 1527 aa15.13■□□□□ 0.01
EPHB4-208ENST00000492403 CROCC2H7BZ55 1655 aa15.13■□□□□ 0.01
EPHB4-208ENST00000492403 CEP152O94986 1710 aa15.13■□□□□ 0.01
EPHB4-208ENST00000492403 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
EPHB4-208ENST00000492403 FGD6Q6ZV73 1430 aa15.13■□□□□ 0.01
EPHB4-208ENST00000492403 ERBINQ96RT1 1412 aa15.13■□□□□ 0.01
EPHB4-208ENST00000492403 CFAP65Q6ZU64 1925 aaKnown RBP15.13■□□□□ 0.01
EPHB4-208ENST00000492403 DAPK1P53355 1430 aa15.12■□□□□ 0.01
EPHB4-208ENST00000492403 ABCC5O15440 1437 aa15.11■□□□□ 0.01
EPHB4-208ENST00000492403 TOM1O60784 492 aa15.11■□□□□ 0.01
EPHB4-208ENST00000492403 EFCAB3Q8N7B9 438 aa15.11■□□□□ 0.01
EPHB4-208ENST00000492403 PODXL2Q9NZ53 605 aa15.11■□□□□ 0.01
EPHB4-208ENST00000492403 EID1Q9Y6B2 187 aa15.11■□□□□ 0.01
EPHB4-208ENST00000492403 PITPNM1O00562 1244 aa15.1■□□□□ 0.01
EPHB4-208ENST00000492403 SOX12O15370 315 aa15.1■□□□□ 0.01
EPHB4-208ENST00000492403 LARP6Q9BRS8 491 aaKnown RBP15.1■□□□□ 0.01
EPHB4-208ENST00000492403 NPHP4O75161 1426 aaPredicted RBP15.09■□□□□ 0.01
EPHB4-208ENST00000492403 ERVK-7P63135 1459 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms