RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 SETD5Q9C0A6 1442 aa18.99■□□□□ 0.63
CACNA1C-228ENST00000492150 ZNF644Q9H582 1327 aaPredicted RBP18.99■□□□□ 0.63
CACNA1C-228ENST00000492150 MROH1Q8NDA8 1641 aa18.98■□□□□ 0.63
CACNA1C-228ENST00000492150 NHSL1Q5SYE7 1610 aa18.97■□□□□ 0.63
CACNA1C-228ENST00000492150 IFFO2Q5TF58 517 aa18.97■□□□□ 0.63
CACNA1C-228ENST00000492150 EFCAB6Q5THR3 1501 aa18.96■□□□□ 0.63
CACNA1C-228ENST00000492150 SLC26A8Q96RN1 970 aa18.96■□□□□ 0.63
CACNA1C-228ENST00000492150 ARHGAP31Q2M1Z3 1444 aa18.96■□□□□ 0.63
CACNA1C-228ENST00000492150 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.96■□□□□ 0.63
CACNA1C-228ENST00000492150 RSPH4AQ5TD94 716 aa18.95■□□□□ 0.62
CACNA1C-228ENST00000492150 MAST1Q9Y2H9 1570 aa18.94■□□□□ 0.62
CACNA1C-228ENST00000492150 CADPS2Q86UW7 1296 aa18.94■□□□□ 0.62
CACNA1C-228ENST00000492150 C8orf37Q96NL8 207 aa18.94■□□□□ 0.62
CACNA1C-228ENST00000492150 MTUS2Q5JR59 1369 aa18.93■□□□□ 0.62
CACNA1C-228ENST00000492150 BRINP3Q76B58 766 aa18.88■□□□□ 0.61
CACNA1C-228ENST00000492150 ARHGEF5Q12774 1597 aa18.88■□□□□ 0.61
CACNA1C-228ENST00000492150 ASXL1Q8IXJ9 1541 aa18.87■□□□□ 0.61
CACNA1C-228ENST00000492150 C19orf44Q9H6X5 657 aa18.87■□□□□ 0.61
CACNA1C-228ENST00000492150 BLMP54132 1417 aaPredicted RBP18.86■□□□□ 0.61
CACNA1C-228ENST00000492150 TRPC5Q9UL62 973 aaPredicted RBP18.86■□□□□ 0.61
CACNA1C-228ENST00000492150 ATF3P18847 181 aa18.85■□□□□ 0.61
CACNA1C-228ENST00000492150 LRRC59Q96AG4 307 aaKnown RBP18.85■□□□□ 0.61
CACNA1C-228ENST00000492150 STAG3Q9UJ98 1225 aa18.85■□□□□ 0.61
CACNA1C-228ENST00000492150 ATRNO75882 1429 aa18.84■□□□□ 0.61
CACNA1C-228ENST00000492150 PNPLA6Q8IY17 1366 aa18.84■□□□□ 0.61
CACNA1C-228ENST00000492150 EHBP1L1Q8N3D4 1523 aa18.84■□□□□ 0.61
CACNA1C-228ENST00000492150 CEP162Q5TB80 1403 aa18.83■□□□□ 0.61
CACNA1C-228ENST00000492150 DCCP43146 1447 aa18.83■□□□□ 0.6
CACNA1C-228ENST00000492150 YY1P25490 414 aa18.82■□□□□ 0.6
CACNA1C-228ENST00000492150 ADGRB3O60242 1522 aa18.82■□□□□ 0.6
CACNA1C-228ENST00000492150 BCL9LQ86UU0 1499 aa18.82■□□□□ 0.6
CACNA1C-228ENST00000492150 USP21Q9UK80 565 aa18.8■□□□□ 0.6
CACNA1C-228ENST00000492150 PLEKHG1Q9ULL1 1385 aa18.8■□□□□ 0.6
CACNA1C-228ENST00000492150 TSPY4P0CV99 314 aa18.79■□□□□ 0.6
CACNA1C-228ENST00000492150 TSPY10P0CW01 314 aa18.79■□□□□ 0.6
CACNA1C-228ENST00000492150 C14orf37Q86TY3 774 aa18.79■□□□□ 0.6
CACNA1C-228ENST00000492150 FNBP4Q8N3X1 1017 aaPredicted RBP18.78■□□□□ 0.6
CACNA1C-228ENST00000492150 UNC13BO14795 1591 aa18.77■□□□□ 0.6
CACNA1C-228ENST00000492150 HRCP23327 699 aa18.77■□□□□ 0.6
CACNA1C-228ENST00000492150 IDI1Q13907 227 aa18.77■□□□□ 0.6
CACNA1C-228ENST00000492150 SPHKAPQ2M3C7 1700 aa18.76■□□□□ 0.59
CACNA1C-228ENST00000492150 PTCH1Q13635 1447 aa18.75■□□□□ 0.59
CACNA1C-228ENST00000492150 ZFYVE9O95405 1425 aa18.74■□□□□ 0.59
CACNA1C-228ENST00000492150 PIK3R4Q99570 1358 aa18.74■□□□□ 0.59
CACNA1C-228ENST00000492150 TBX22Q9Y458 520 aa18.74■□□□□ 0.59
CACNA1C-228ENST00000492150 DEFB132Q7Z7B7 95 aa18.73■□□□□ 0.59
CACNA1C-228ENST00000492150 BCANQ96GW7 911 aa18.73■□□□□ 0.59
CACNA1C-228ENST00000492150 MST1RQ04912 1400 aa18.73■□□□□ 0.59
CACNA1C-228ENST00000492150 ADAMTS2O95450 1211 aa18.72■□□□□ 0.59
CACNA1C-228ENST00000492150 DUOX2Q9NRD8 1548 aa18.72■□□□□ 0.59
CACNA1C-228ENST00000492150 LAMC1P11047 1609 aa18.71■□□□□ 0.59
CACNA1C-228ENST00000492150 NOS1P29475 1434 aa18.69■□□□□ 0.58
CACNA1C-228ENST00000492150 LMTK2Q8IWU2 1503 aa18.69■□□□□ 0.58
CACNA1C-228ENST00000492150 SF3B2Q13435 895 aaKnown RBP18.68■□□□□ 0.58
CACNA1C-228ENST00000492150 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.68■□□□□ 0.58
CACNA1C-228ENST00000492150 COL22A1Q8NFW1 1626 aaPredicted RBP18.67■□□□□ 0.58
CACNA1C-228ENST00000492150 ADAMTS13Q76LX8 1427 aa18.66■□□□□ 0.58
CACNA1C-228ENST00000492150 BRWD3Q6RI45 1802 aa18.66■□□□□ 0.58
CACNA1C-228ENST00000492150 MYO5BQ9ULV0 1848 aa18.66■□□□□ 0.58
CACNA1C-228ENST00000492150 MARF1Q9Y4F3 1742 aaKnown RBP18.66■□□□□ 0.58
CACNA1C-228ENST00000492150 PSDA5PKW4 1024 aaPredicted RBP18.65■□□□□ 0.58
CACNA1C-228ENST00000492150 HDGFP51858 240 aaKnown RBP18.65■□□□□ 0.58
CACNA1C-228ENST00000492150 SLC52A1Q9NWF4 448 aa18.65■□□□□ 0.58
CACNA1C-228ENST00000492150 PPP1R15AO75807 674 aaPredicted RBP18.64■□□□□ 0.57
CACNA1C-228ENST00000492150 GJD4Q96KN9 370 aaPredicted RBP18.64■□□□□ 0.57
CACNA1C-228ENST00000492150 ERBINQ96RT1 1412 aa18.64■□□□□ 0.57
CACNA1C-228ENST00000492150 TRPM2O94759 1503 aa18.64■□□□□ 0.57
CACNA1C-228ENST00000492150 RIMS2Q9UQ26 1411 aa18.63■□□□□ 0.57
CACNA1C-228ENST00000492150 GLI3P10071 1580 aa18.6■□□□□ 0.57
CACNA1C-228ENST00000492150 GCC2Q8IWJ2 1684 aa18.6■□□□□ 0.57
CACNA1C-228ENST00000492150 KANK1Q14678 1352 aa18.59■□□□□ 0.57
CACNA1C-228ENST00000492150 DDX17Q92841 729 aaKnown RBP18.59■□□□□ 0.57
CACNA1C-228ENST00000492150 XRN1Q8IZH2 1706 aaKnown RBP18.59■□□□□ 0.57
CACNA1C-228ENST00000492150 SOS2Q07890 1332 aaPredicted RBP18.58■□□□□ 0.57
CACNA1C-228ENST00000492150 TMEM131LA2VDJ0 1609 aa18.58■□□□□ 0.56
CACNA1C-228ENST00000492150 MYOM2P54296 1465 aa18.58■□□□□ 0.56
CACNA1C-228ENST00000492150 PTPRUQ92729 1446 aa18.57■□□□□ 0.56
CACNA1C-228ENST00000492150 SENP3-EIF4A1A0A087X0R7 540 aa18.56■□□□□ 0.56
CACNA1C-228ENST00000492150 RALGAPBQ86X10 1494 aa18.56■□□□□ 0.56
CACNA1C-228ENST00000492150 BAG6P46379 1132 aa18.55■□□□□ 0.56
CACNA1C-228ENST00000492150 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.55■□□□□ 0.56
CACNA1C-228ENST00000492150 AMOTL2Q9Y2J4 779 aa18.55■□□□□ 0.56
CACNA1C-228ENST00000492150 KANK4Q5T7N3 995 aaPredicted RBP18.54■□□□□ 0.56
CACNA1C-228ENST00000492150 RPRD2Q5VT52 1461 aaKnown RBP18.53■□□□□ 0.56
CACNA1C-228ENST00000492150 VPS8Q8N3P4 1428 aa18.53■□□□□ 0.56
CACNA1C-228ENST00000492150 ADGRL3Q9HAR2 1447 aa18.53■□□□□ 0.56
CACNA1C-228ENST00000492150 KIF15Q9NS87 1388 aa18.53■□□□□ 0.56
CACNA1C-228ENST00000492150 MYOM3Q5VTT5 1437 aa18.51■□□□□ 0.55
CACNA1C-228ENST00000492150 NALCNQ8IZF0 1738 aa18.5■□□□□ 0.55
CACNA1C-228ENST00000492150 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.55
CACNA1C-228ENST00000492150 C1orf167Q5SNV9 1468 aa18.5■□□□□ 0.55
CACNA1C-228ENST00000492150 RGPD1P0DJD0 1748 aa18.49■□□□□ 0.55
CACNA1C-228ENST00000492150 SLIT2O94813 1529 aa18.49■□□□□ 0.55
CACNA1C-228ENST00000492150 R3HDM1Q15032 1099 aaKnown RBP18.48■□□□□ 0.55
CACNA1C-228ENST00000492150 UNC5CLQ8IV45 518 aa18.47■□□□□ 0.55
CACNA1C-228ENST00000492150 DISP2A7MBM2 1401 aa18.47■□□□□ 0.55
CACNA1C-228ENST00000492150 PTPN23Q9H3S7 1636 aa18.46■□□□□ 0.55
CACNA1C-228ENST00000492150 LOC105371045A0A1W2PR82 267 aa18.46■□□□□ 0.55
CACNA1C-228ENST00000492150 DCAF8L1A6NGE4 600 aa18.46■□□□□ 0.55
CACNA1C-228ENST00000492150 CROCC2H7BZ55 1655 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms