RNA–Protein interactions for RNA: ENST00000491383.5

KDM3A-214, Transcript of lysine demethylase 3A, humanhuman

TSL 1 (best)

Gene KDM3A, Length 4,485 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-214ENST00000491383 SPAG9O60271 1321 aaKnown RBP6.59□□□□□ -1.35
KDM3A-214ENST00000491383 GCC2Q8IWJ2 1684 aa6.59□□□□□ -1.35
KDM3A-214ENST00000491383 PAXIP1Q6ZW49 1069 aaPredicted RBP6.59□□□□□ -1.35
KDM3A-214ENST00000491383 ZNF518AQ6AHZ1 1483 aa6.59□□□□□ -1.36
KDM3A-214ENST00000491383 PTPRKQ15262 1439 aa6.58□□□□□ -1.36
KDM3A-214ENST00000491383 RTEL1-TNFRSF6BF6WH68 1400 aa6.58□□□□□ -1.36
KDM3A-214ENST00000491383 FAM161AQ3B820 660 aa6.58□□□□□ -1.36
KDM3A-214ENST00000491383 DENND4BO75064 1496 aaPredicted RBP6.58□□□□□ -1.36
KDM3A-214ENST00000491383 CARD11Q9BXL7 1154 aa6.58□□□□□ -1.36
KDM3A-214ENST00000491383 NAIPQ13075 1403 aa6.57□□□□□ -1.36
KDM3A-214ENST00000491383 TRHP20396 242 aaPredicted RBP6.57□□□□□ -1.36
KDM3A-214ENST00000491383 BRD2P25440 801 aaKnown RBP6.57□□□□□ -1.36
KDM3A-214ENST00000491383 EXOC6Q8TAG9 804 aa6.57□□□□□ -1.36
KDM3A-214ENST00000491383 NCOA1Q15788 1441 aa6.57□□□□□ -1.36
KDM3A-214ENST00000491383 KIF15Q9NS87 1388 aa6.57□□□□□ -1.36
KDM3A-214ENST00000491383 RRP9O43818 475 aaKnown RBP6.57□□□□□ -1.36
KDM3A-214ENST00000491383 PLCB2Q00722 1185 aa6.57□□□□□ -1.36
KDM3A-214ENST00000491383 PDE3BQ13370 1112 aa6.57□□□□□ -1.36
KDM3A-214ENST00000491383 POGZQ7Z3K3 1410 aa6.57□□□□□ -1.36
KDM3A-214ENST00000491383 TRAPPC8Q9Y2L5 1435 aa6.57□□□□□ -1.36
KDM3A-214ENST00000491383 KIF13AQ9H1H9 1805 aa6.57□□□□□ -1.36
KDM3A-214ENST00000491383 PLXNC1O60486 1568 aa6.57□□□□□ -1.36
KDM3A-214ENST00000491383 TSPOAP1O95153 1857 aa6.56□□□□□ -1.36
KDM3A-214ENST00000491383 ARHGEF12Q9NZN5 1544 aa6.56□□□□□ -1.36
KDM3A-214ENST00000491383 KIAA2012Q0VF49 1180 aa6.56□□□□□ -1.36
KDM3A-214ENST00000491383 FTSJ3Q8IY81 847 aaKnown RBP6.56□□□□□ -1.36
KDM3A-214ENST00000491383 PRKRIP1Q9H875 184 aaPredicted RBP6.56□□□□□ -1.36
KDM3A-214ENST00000491383 RRP1P56182 461 aaKnown RBP6.56□□□□□ -1.36
KDM3A-214ENST00000491383 AAMPQ13685 434 aa6.56□□□□□ -1.36
KDM3A-214ENST00000491383 DUOX2Q9NRD8 1548 aa6.56□□□□□ -1.36
KDM3A-214ENST00000491383 ATP7AQ04656 1500 aa6.55□□□□□ -1.36
KDM3A-214ENST00000491383 DDX11L8A8MPP1 907 aa6.55□□□□□ -1.36
KDM3A-214ENST00000491383 FAM13BQ9NYF5 915 aa6.55□□□□□ -1.36
KDM3A-214ENST00000491383 KNSTRNQ9Y448 316 aa6.55□□□□□ -1.36
KDM3A-214ENST00000491383 ANKRD50Q9ULJ7 1429 aa6.55□□□□□ -1.36
KDM3A-214ENST00000491383 CENPQQ7L2Z9 268 aaPredicted RBP6.55□□□□□ -1.36
KDM3A-214ENST00000491383 AFAP1Q8N556 730 aa6.55□□□□□ -1.36
KDM3A-214ENST00000491383 MAP7D2Q96T17 732 aa6.55□□□□□ -1.36
KDM3A-214ENST00000491383 TPM2P07951 284 aa6.54□□□□□ -1.36
KDM3A-214ENST00000491383 RALBP1Q15311 655 aa6.54□□□□□ -1.36
KDM3A-214ENST00000491383 ERBINQ96RT1 1412 aa6.54□□□□□ -1.36
KDM3A-214ENST00000491383 ZFYVE16Q7Z3T8 1539 aa6.54□□□□□ -1.36
KDM3A-214ENST00000491383 HECW2Q9P2P5 1572 aa6.54□□□□□ -1.36
KDM3A-214ENST00000491383 MLH3Q9UHC1 1453 aa6.54□□□□□ -1.36
KDM3A-214ENST00000491383 INO80Q9ULG1 1556 aaPredicted RBP6.54□□□□□ -1.36
KDM3A-214ENST00000491383 KDM5CP41229 1560 aa6.54□□□□□ -1.36
KDM3A-214ENST00000491383 ZBTB7CA1YPR0 619 aa6.54□□□□□ -1.36
KDM3A-214ENST00000491383 TNNT3P45378 269 aaPredicted RBP6.54□□□□□ -1.36
KDM3A-214ENST00000491383 CC2D1BQ5T0F9 858 aaKnown RBP6.54□□□□□ -1.36
KDM3A-214ENST00000491383 PPRC1Q5VV67 1664 aaKnown RBP6.53□□□□□ -1.36
KDM3A-214ENST00000491383 TMEM132AQ24JP5 1023 aa6.53□□□□□ -1.36
KDM3A-214ENST00000491383 CASC1Q6TDU7 716 aa6.53□□□□□ -1.36
KDM3A-214ENST00000491383 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.53□□□□□ -1.36
KDM3A-214ENST00000491383 FRAT2O75474 233 aaPredicted RBP6.53□□□□□ -1.36
KDM3A-214ENST00000491383 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.53□□□□□ -1.36
KDM3A-214ENST00000491383 MAGI2Q86UL8 1455 aa6.53□□□□□ -1.36
KDM3A-214ENST00000491383 ZMYND15Q9H091 742 aa6.53□□□□□ -1.36
KDM3A-214ENST00000491383 MRE11P49959 708 aa6.52□□□□□ -1.37
KDM3A-214ENST00000491383 CALD1Q05682 793 aaKnown RBP6.52□□□□□ -1.37
KDM3A-214ENST00000491383 SKOR2Q2VWA4 1001 aaPredicted RBP6.52□□□□□ -1.37
KDM3A-214ENST00000491383 KANK1Q14678 1352 aa6.52□□□□□ -1.37
KDM3A-214ENST00000491383 RICTORQ6R327 1708 aa6.52□□□□□ -1.37
KDM3A-214ENST00000491383 IGSF3O75054 1194 aa6.52□□□□□ -1.37
KDM3A-214ENST00000491383 ZMYM4Q5VZL5 1548 aa6.52□□□□□ -1.37
KDM3A-214ENST00000491383 MTERF4Q7Z6M4 381 aaKnown RBP6.52□□□□□ -1.37
KDM3A-214ENST00000491383 DHX29Q7Z478 1369 aaKnown RBP6.52□□□□□ -1.37
KDM3A-214ENST00000491383 RAPGEF3O95398 923 aa6.51□□□□□ -1.37
KDM3A-214ENST00000491383 CNKSR2Q8WXI2 1034 aa6.51□□□□□ -1.37
KDM3A-214ENST00000491383 CFAP44Q96MT7 982 aa6.51□□□□□ -1.37
KDM3A-214ENST00000491383 RWDD1Q9H446 243 aaPredicted RBP6.51□□□□□ -1.37
KDM3A-214ENST00000491383 NEUROD2Q15784 382 aa6.51□□□□□ -1.37
KDM3A-214ENST00000491383 BACH2Q9BYV9 841 aa6.51□□□□□ -1.37
KDM3A-214ENST00000491383 KTN1Q86UP2 1357 aaKnown RBP6.51□□□□□ -1.37
KDM3A-214ENST00000491383 A2MP01023 1474 aa6.51□□□□□ -1.37
KDM3A-214ENST00000491383 EIF2AK4Q9P2K8 1649 aaKnown RBP6.51□□□□□ -1.37
KDM3A-214ENST00000491383 CDCA8Q53HL2 280 aa6.51□□□□□ -1.37
KDM3A-214ENST00000491383 CRBNQ96SW2 442 aa6.51□□□□□ -1.37
KDM3A-214ENST00000491383 PLIN1O60240 522 aa6.5□□□□□ -1.37
KDM3A-214ENST00000491383 MFAP1P55081 439 aaKnown RBP6.5□□□□□ -1.37
KDM3A-214ENST00000491383 KIDINS220Q9ULH0 1771 aa6.5□□□□□ -1.37
KDM3A-214ENST00000491383 NUP155O75694 1391 aa6.5□□□□□ -1.37
KDM3A-214ENST00000491383 PMFBP1Q8TBY8 1022 aa6.5□□□□□ -1.37
KDM3A-214ENST00000491383 RBM10P98175 930 aaKnown RBP6.5□□□□□ -1.37
KDM3A-214ENST00000491383 CSPP1Q1MSJ5 1256 aa6.5□□□□□ -1.37
KDM3A-214ENST00000491383 MAPK8IP3Q9UPT6 1336 aa6.49□□□□□ -1.37
KDM3A-214ENST00000491383 MPHOSPH9Q99550 1183 aa6.49□□□□□ -1.37
KDM3A-214ENST00000491383 CHMP5Q9NZZ3 219 aa6.49□□□□□ -1.37
KDM3A-214ENST00000491383 FBXO3Q9UK99 471 aa6.49□□□□□ -1.37
KDM3A-214ENST00000491383 KDM6BO15054 1643 aa6.49□□□□□ -1.37
KDM3A-214ENST00000491383 KDM5DQ9BY66 1539 aa6.49□□□□□ -1.37
KDM3A-214ENST00000491383 UNC13BO14795 1591 aa6.49□□□□□ -1.37
KDM3A-214ENST00000491383 NLRP13Q86W25 1043 aa6.49□□□□□ -1.37
KDM3A-214ENST00000491383 CHMP4BQ9H444 224 aaKnown RBP6.49□□□□□ -1.37
KDM3A-214ENST00000491383 FRMPD1Q5SYB0 1578 aa6.49□□□□□ -1.37
KDM3A-214ENST00000491383 KIF3BO15066 747 aa6.49□□□□□ -1.37
KDM3A-214ENST00000491383 SYAP1Q96A49 352 aaPredicted RBP6.49□□□□□ -1.37
KDM3A-214ENST00000491383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.49□□□□□ -1.372e-7■■□□□ 13.4
KDM3A-214ENST00000491383 ATP10AO60312 1499 aa6.49□□□□□ -1.37
KDM3A-214ENST00000491383 L3MBTL2Q969R5 705 aa6.48□□□□□ -1.37
KDM3A-214ENST00000491383 DDX49Q9Y6V7 483 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms