RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 TRAK1Q9UPV9 953 aa14.41□□□□□ -0.1
VPS72-205ENST00000491094 SPAG9O60271 1321 aaKnown RBP14.41□□□□□ -0.1
VPS72-205ENST00000491094 TNNQ9UQP3 1299 aa14.39□□□□□ -0.11
VPS72-205ENST00000491094 KDM2BQ8NHM5 1336 aa14.39□□□□□ -0.11
VPS72-205ENST00000491094 ADGBQ8N7X0 1667 aa14.39□□□□□ -0.11
VPS72-205ENST00000491094 MORC1Q86VD1 984 aa14.39□□□□□ -0.11
VPS72-205ENST00000491094 POLR1AO95602 1720 aaPredicted RBP14.39□□□□□ -0.11
VPS72-205ENST00000491094 SEC24BO95487 1268 aa14.39□□□□□ -0.11
VPS72-205ENST00000491094 COL17A1Q9UMD9 1497 aaPredicted RBP14.38□□□□□ -0.11
VPS72-205ENST00000491094 SYCP2Q9BX26 1530 aa14.38□□□□□ -0.11
VPS72-205ENST00000491094 CENPJQ9HC77 1338 aaPredicted RBP14.38□□□□□ -0.11
VPS72-205ENST00000491094 MAGI2Q86UL8 1455 aa14.38□□□□□ -0.11
VPS72-205ENST00000491094 TMEM132EQ6IEE7 984 aa14.37□□□□□ -0.11
VPS72-205ENST00000491094 SLC12A5Q9H2X9 1139 aa14.37□□□□□ -0.11
VPS72-205ENST00000491094 E9PSI1 815 aa14.36□□□□□ -0.11
VPS72-205ENST00000491094 CARD14Q9BXL6 1004 aa14.35□□□□□ -0.11
VPS72-205ENST00000491094 KDM5DQ9BY66 1539 aa14.35□□□□□ -0.11
VPS72-205ENST00000491094 SHANK2Q9UPX8 1470 aa14.35□□□□□ -0.11
VPS72-205ENST00000491094 BLMP54132 1417 aaPredicted RBP14.35□□□□□ -0.11
VPS72-205ENST00000491094 GPRASP1Q5JY77 1395 aa14.34□□□□□ -0.11
VPS72-205ENST00000491094 CDC42BPAQ5VT25 1732 aa14.34□□□□□ -0.11
VPS72-205ENST00000491094 ADGRF5Q8IZF2 1346 aa14.34□□□□□ -0.11
VPS72-205ENST00000491094 GGT6Q6P531 493 aa14.33□□□□□ -0.12
VPS72-205ENST00000491094 GZF1Q9H116 711 aaPredicted RBP14.33□□□□□ -0.12
VPS72-205ENST00000491094 NUP160Q12769 1436 aa14.33□□□□□ -0.12
VPS72-205ENST00000491094 WWC1Q8IX03 1113 aa14.32□□□□□ -0.12
VPS72-205ENST00000491094 TCP11L2Q8N4U5 519 aa14.32□□□□□ -0.12
VPS72-205ENST00000491094 U2SURPO15042 1029 aaKnown RBP14.32□□□□□ -0.12
VPS72-205ENST00000491094 U2AF1L5P0DN76 240 aaPredicted RBP14.32□□□□□ -0.12
VPS72-205ENST00000491094 U2AF1Q01081 240 aaKnown RBP eCLIP14.32□□□□□ -0.12
VPS72-205ENST00000491094 UPF2Q9HAU5 1272 aaKnown RBP14.31□□□□□ -0.12
VPS72-205ENST00000491094 ZNF521Q96K83 1311 aa14.3□□□□□ -0.12
VPS72-205ENST00000491094 MTHFSP49914 203 aa14.3□□□□□ -0.12
VPS72-205ENST00000491094 POGKQ9P215 609 aa14.3□□□□□ -0.12
VPS72-205ENST00000491094 SAMD9LQ8IVG5 1584 aa14.3□□□□□ -0.12
VPS72-205ENST00000491094 ZMYM4Q5VZL5 1548 aa14.29□□□□□ -0.12
VPS72-205ENST00000491094 STK26Q9P289 416 aa14.29□□□□□ -0.12
VPS72-205ENST00000491094 RLBP1P12271 317 aa14.29□□□□□ -0.12
VPS72-205ENST00000491094 BECN1Q14457 450 aa14.29□□□□□ -0.12
VPS72-205ENST00000491094 TRAPPC8Q9Y2L5 1435 aa14.29□□□□□ -0.12
VPS72-205ENST00000491094 CROCC2H7BZ55 1655 aa14.29□□□□□ -0.12
VPS72-205ENST00000491094 FTSJ3Q8IY81 847 aaKnown RBP14.29□□□□□ -0.12
VPS72-205ENST00000491094 ABCA8O94911 1581 aa14.28□□□□□ -0.12
VPS72-205ENST00000491094 PCDHB15Q9Y5E8 787 aa14.28□□□□□ -0.12
VPS72-205ENST00000491094 WDR7Q9Y4E6 1490 aa14.28□□□□□ -0.12
VPS72-205ENST00000491094 CGNL1Q0VF96 1302 aa14.28□□□□□ -0.12
VPS72-205ENST00000491094 TSR2Q969E8 191 aaKnown RBP14.27□□□□□ -0.12
VPS72-205ENST00000491094 PDZRN3Q9UPQ7 1066 aa14.27□□□□□ -0.12
VPS72-205ENST00000491094 TRPM1Q7Z4N2 1603 aa14.27□□□□□ -0.13
VPS72-205ENST00000491094 MFAP1P55081 439 aaKnown RBP14.27□□□□□ -0.13
VPS72-205ENST00000491094 NKTRP30414 1462 aaKnown RBP14.25□□□□□ -0.13
VPS72-205ENST00000491094 EIF3AQ14152 1382 aaKnown RBP14.25□□□□□ -0.13
VPS72-205ENST00000491094 RARSP54136 660 aaKnown RBP14.25□□□□□ -0.13
VPS72-205ENST00000491094 KANK1Q14678 1352 aa14.25□□□□□ -0.13
VPS72-205ENST00000491094 PDE3AQ14432 1141 aa14.24□□□□□ -0.13
VPS72-205ENST00000491094 CFAP53Q96M91 514 aa14.24□□□□□ -0.13
VPS72-205ENST00000491094 RUNDC1Q96C34 613 aa14.24□□□□□ -0.13
VPS72-205ENST00000491094 ADCY10Q96PN6 1610 aa14.23□□□□□ -0.13
VPS72-205ENST00000491094 TRMT2AQ8IZ69 625 aaKnown RBP14.23□□□□□ -0.13
VPS72-205ENST00000491094 SCAPERQ9BY12 1400 aa14.23□□□□□ -0.13
VPS72-205ENST00000491094 SCAF11Q99590 1463 aaKnown RBP14.23□□□□□ -0.13
VPS72-205ENST00000491094 ITPRIPQ8IWB1 547 aa14.23□□□□□ -0.13
VPS72-205ENST00000491094 CABP2Q9NPB3 220 aa14.23□□□□□ -0.13
VPS72-205ENST00000491094 SMC4Q9NTJ3 1288 aa14.22□□□□□ -0.13
VPS72-205ENST00000491094 PRDM15P57071 1507 aaPredicted RBP14.22□□□□□ -0.13
VPS72-205ENST00000491094 PMFBP1Q8TBY8 1022 aa14.21□□□□□ -0.13
VPS72-205ENST00000491094 ASXL1Q8IXJ9 1541 aa14.21□□□□□ -0.13
VPS72-205ENST00000491094 MAPK8IP3Q9UPT6 1336 aa14.21□□□□□ -0.13
VPS72-205ENST00000491094 RWDD1Q9H446 243 aaPredicted RBP14.21□□□□□ -0.13
VPS72-205ENST00000491094 GGNBP2Q9H3C7 697 aa14.21□□□□□ -0.13
VPS72-205ENST00000491094 ARHGEF5Q12774 1597 aa14.2□□□□□ -0.14
VPS72-205ENST00000491094 SRPK2P78362 688 aaKnown RBP14.2□□□□□ -0.14
VPS72-205ENST00000491094 USP19O94966 1318 aa14.2□□□□□ -0.14
VPS72-205ENST00000491094 TTC37Q6PGP7 1564 aa14.19□□□□□ -0.14
VPS72-205ENST00000491094 NSD3Q9BZ95 1437 aa14.19□□□□□ -0.14
VPS72-205ENST00000491094 FOXD4L1Q9NU39 408 aa14.19□□□□□ -0.14
VPS72-205ENST00000491094 E9PCH4 1651 aa14.19□□□□□ -0.14
VPS72-205ENST00000491094 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.19□□□□□ -0.14
VPS72-205ENST00000491094 EXOSC9Q06265 439 aaKnown RBP14.18□□□□□ -0.14
VPS72-205ENST00000491094 CDC42BPBQ9Y5S2 1711 aa14.18□□□□□ -0.14
VPS72-205ENST00000491094 ELL2O00472 640 aaPredicted RBP14.18□□□□□ -0.14
VPS72-205ENST00000491094 TBC1D2Q9BYX2 928 aa14.18□□□□□ -0.14
VPS72-205ENST00000491094 FBLN1P23142 703 aa14.17□□□□□ -0.14
VPS72-205ENST00000491094 DZIP1LQ8IYY4 767 aaKnown RBP14.17□□□□□ -0.14
VPS72-205ENST00000491094 PIK3C2GO75747 1445 aa14.16□□□□□ -0.14
VPS72-205ENST00000491094 PRKCSHP14314 528 aaPredicted RBP14.16□□□□□ -0.14
VPS72-205ENST00000491094 ZKSCAN2Q63HK3 967 aa14.16□□□□□ -0.14
VPS72-205ENST00000491094 MYH16Q9H6N6 1097 aa14.16□□□□□ -0.14
VPS72-205ENST00000491094 DUOX2Q9NRD8 1548 aa14.16□□□□□ -0.14
VPS72-205ENST00000491094 PLCH2O75038 1416 aa14.16□□□□□ -0.14
VPS72-205ENST00000491094 ERCC6L2Q5T890 1561 aa14.15□□□□□ -0.14
VPS72-205ENST00000491094 INSRP06213 1382 aa14.14□□□□□ -0.15
VPS72-205ENST00000491094 HSP90AA1P07900 732 aaKnown RBP14.14□□□□□ -0.15
VPS72-205ENST00000491094 LNPKQ9C0E8 428 aa14.14□□□□□ -0.15
VPS72-205ENST00000491094 UGGT1Q9NYU2 1555 aa14.14□□□□□ -0.15
VPS72-205ENST00000491094 MINK1Q8N4C8 1332 aaPredicted RBP14.13□□□□□ -0.15
VPS72-205ENST00000491094 SLC24A1O60721 1099 aa14.13□□□□□ -0.15
VPS72-205ENST00000491094 C22orf23Q9BZE7 217 aa14.13□□□□□ -0.15
VPS72-205ENST00000491094 ATP10AO60312 1499 aa14.13□□□□□ -0.15
VPS72-205ENST00000491094 MVPQ14764 893 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms