RNA–Protein interactions for RNA: ENST00000490821.1

ALMS1-205, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 578 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-205ENST00000490821 SLAIN2Q9P270 581 aa12.58□□□□□ -0.4
ALMS1-205ENST00000490821 CHD2O14647 1828 aaKnown RBP12.58□□□□□ -0.4
ALMS1-205ENST00000490821 SHPRHQ149N8 1683 aa12.57□□□□□ -0.4
ALMS1-205ENST00000490821 FGD6Q6ZV73 1430 aa12.56□□□□□ -0.4
ALMS1-205ENST00000490821 ZNF772Q68DY9 489 aaPredicted RBP12.56□□□□□ -0.4
ALMS1-205ENST00000490821 SPATA31A6Q5VVP1 1343 aa12.56□□□□□ -0.4
ALMS1-205ENST00000490821 IDI1Q13907 227 aa12.55□□□□□ -0.4
ALMS1-205ENST00000490821 AHDC1Q5TGY3 1603 aaPredicted RBP12.55□□□□□ -0.4
ALMS1-205ENST00000490821 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
ALMS1-205ENST00000490821 CDK12Q9NYV4 1490 aaPredicted RBP12.53□□□□□ -0.4
ALMS1-205ENST00000490821 ADGRB3O60242 1522 aa12.53□□□□□ -0.4
ALMS1-205ENST00000490821 MYO5BQ9ULV0 1848 aa12.53□□□□□ -0.4
ALMS1-205ENST00000490821 ERBINQ96RT1 1412 aa12.53□□□□□ -0.4
ALMS1-205ENST00000490821 MEX3CQ5U5Q3 659 aaKnown RBP12.52□□□□□ -0.41
ALMS1-205ENST00000490821 KIF15Q9NS87 1388 aa12.52□□□□□ -0.41
ALMS1-205ENST00000490821 LMTK2Q8IWU2 1503 aa12.52□□□□□ -0.41
ALMS1-205ENST00000490821 DIP2AQ14689 1571 aa12.52□□□□□ -0.41
ALMS1-205ENST00000490821 CROCC2H7BZ55 1655 aa12.51□□□□□ -0.41
ALMS1-205ENST00000490821 RXRBP28702 533 aa12.51□□□□□ -0.41
ALMS1-205ENST00000490821 NOS1P29475 1434 aa12.51□□□□□ -0.41
ALMS1-205ENST00000490821 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.51□□□□□ -0.41
ALMS1-205ENST00000490821 MYOM3Q5VTT5 1437 aa12.5□□□□□ -0.41
ALMS1-205ENST00000490821 ZFYVE9O95405 1425 aa12.49□□□□□ -0.41
ALMS1-205ENST00000490821 NCOA3Q9Y6Q9 1424 aa12.49□□□□□ -0.41
ALMS1-205ENST00000490821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.49□□□□□ -0.41
ALMS1-205ENST00000490821 RGS12O14924 1447 aa12.47□□□□□ -0.41
ALMS1-205ENST00000490821 ABCC5O15440 1437 aa12.47□□□□□ -0.41
ALMS1-205ENST00000490821 PLEKHG1Q9ULL1 1385 aa12.47□□□□□ -0.41
ALMS1-205ENST00000490821 RRP7BPQ9NSQ0 103 aa12.47□□□□□ -0.41
ALMS1-205ENST00000490821 KANK1Q14678 1352 aa12.46□□□□□ -0.41
ALMS1-205ENST00000490821 BCANQ96GW7 911 aa12.46□□□□□ -0.41
ALMS1-205ENST00000490821 EP400Q96L91 3159 aa12.46□□□□□ -0.42
ALMS1-205ENST00000490821 GCC2Q8IWJ2 1684 aa12.45□□□□□ -0.42
ALMS1-205ENST00000490821 AFF2P51816 1311 aa12.45□□□□□ -0.42
ALMS1-205ENST00000490821 NUTM2BA6NNL0 878 aaPredicted RBP12.44□□□□□ -0.42
ALMS1-205ENST00000490821 NUTM2EB1AL46 878 aaPredicted RBP12.44□□□□□ -0.42
ALMS1-205ENST00000490821 CADPS2Q86UW7 1296 aa12.44□□□□□ -0.42
ALMS1-205ENST00000490821 NUTM2AQ8IVF1 878 aaPredicted RBP12.44□□□□□ -0.42
ALMS1-205ENST00000490821 SLC52A1Q9NWF4 448 aa12.44□□□□□ -0.42
ALMS1-205ENST00000490821 TMEM131LA2VDJ0 1609 aa12.44□□□□□ -0.42
ALMS1-205ENST00000490821 KANK4Q5T7N3 995 aaPredicted RBP12.43□□□□□ -0.42
ALMS1-205ENST00000490821 BRINP3Q76B58 766 aa12.43□□□□□ -0.42
ALMS1-205ENST00000490821 C19orf44Q9H6X5 657 aa12.43□□□□□ -0.42
ALMS1-205ENST00000490821 TBX22Q9Y458 520 aa12.43□□□□□ -0.42
ALMS1-205ENST00000490821 NHSL1Q5SYE7 1610 aa12.43□□□□□ -0.42
ALMS1-205ENST00000490821 ADAMTS13Q76LX8 1427 aa12.43□□□□□ -0.42
ALMS1-205ENST00000490821 RIMS2Q9UQ26 1411 aa12.43□□□□□ -0.42
ALMS1-205ENST00000490821 C14orf37Q86TY3 774 aa12.42□□□□□ -0.42
ALMS1-205ENST00000490821 SETD5Q9C0A6 1442 aa12.42□□□□□ -0.42
ALMS1-205ENST00000490821 ASXL1Q8IXJ9 1541 aa12.42□□□□□ -0.42
ALMS1-205ENST00000490821 PTPN23Q9H3S7 1636 aa12.41□□□□□ -0.42
ALMS1-205ENST00000490821 ATF3P18847 181 aa12.41□□□□□ -0.42
ALMS1-205ENST00000490821 DAPK1P53355 1430 aa12.41□□□□□ -0.42
ALMS1-205ENST00000490821 RBM6P78332 1123 aaKnown RBP12.4□□□□□ -0.42
ALMS1-205ENST00000490821 RPRD2Q5VT52 1461 aaKnown RBP12.4□□□□□ -0.43
ALMS1-205ENST00000490821 VPS8Q8N3P4 1428 aa12.39□□□□□ -0.43
ALMS1-205ENST00000490821 PPP1R15AO75807 674 aaPredicted RBP12.39□□□□□ -0.43
ALMS1-205ENST00000490821 RNF39Q9H2S5 420 aa12.39□□□□□ -0.43
ALMS1-205ENST00000490821 QTRT2Q9H974 415 aaKnown RBP12.39□□□□□ -0.43
ALMS1-205ENST00000490821 PIK3R4Q99570 1358 aa12.39□□□□□ -0.43
ALMS1-205ENST00000490821 SETBP1Q9Y6X0 1596 aa12.39□□□□□ -0.43
ALMS1-205ENST00000490821 C8orf37Q96NL8 207 aa12.38□□□□□ -0.43
ALMS1-205ENST00000490821 DCCP43146 1447 aa12.37□□□□□ -0.43
ALMS1-205ENST00000490821 MST1RQ04912 1400 aa12.37□□□□□ -0.43
ALMS1-205ENST00000490821 PTPRUQ92729 1446 aa12.37□□□□□ -0.43
ALMS1-205ENST00000490821 NUTM2DQ5VT03 806 aaPredicted RBP12.37□□□□□ -0.43
ALMS1-205ENST00000490821 ATAD2Q6PL18 1390 aa12.36□□□□□ -0.43
ALMS1-205ENST00000490821 PNPLA6Q8IY17 1366 aa12.36□□□□□ -0.43
ALMS1-205ENST00000490821 ANKRD30AQ9BXX3 1397 aa12.36□□□□□ -0.43
ALMS1-205ENST00000490821 HDGFP51858 240 aaKnown RBP12.36□□□□□ -0.43
ALMS1-205ENST00000490821 XRN1Q8IZH2 1706 aaKnown RBP12.36□□□□□ -0.43
ALMS1-205ENST00000490821 TRPM2O94759 1503 aa12.36□□□□□ -0.43
ALMS1-205ENST00000490821 UNC13BO14795 1591 aa12.35□□□□□ -0.43
ALMS1-205ENST00000490821 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.34□□□□□ -0.43
ALMS1-205ENST00000490821 LRRC59Q96AG4 307 aaKnown RBP12.34□□□□□ -0.43
ALMS1-205ENST00000490821 CHIC2Q9UKJ5 165 aa12.34□□□□□ -0.43
ALMS1-205ENST00000490821 AMOTL2Q9Y2J4 779 aa12.34□□□□□ -0.43
ALMS1-205ENST00000490821 NRXN3Q9Y4C0 1643 aa12.33□□□□□ -0.43
ALMS1-205ENST00000490821 DDX17Q92841 729 aaKnown RBP12.33□□□□□ -0.44
ALMS1-205ENST00000490821 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
ALMS1-205ENST00000490821 ADGRL2O95490 1459 aa12.33□□□□□ -0.44
ALMS1-205ENST00000490821 NGLY1Q96IV0 654 aa12.32□□□□□ -0.44
ALMS1-205ENST00000490821 LAMC1P11047 1609 aa12.31□□□□□ -0.44
ALMS1-205ENST00000490821 E9PCH4 1651 aa12.31□□□□□ -0.44
ALMS1-205ENST00000490821 ADAMTS2O95450 1211 aa12.3□□□□□ -0.44
ALMS1-205ENST00000490821 CHGAP10645 457 aaKnown RBP12.3□□□□□ -0.44
ALMS1-205ENST00000490821 NALCNQ8IZF0 1738 aa12.3□□□□□ -0.44
ALMS1-205ENST00000490821 ATRNO75882 1429 aa12.28□□□□□ -0.44
ALMS1-205ENST00000490821 ANKRD50Q9ULJ7 1429 aa12.28□□□□□ -0.44
ALMS1-205ENST00000490821 USP21Q9UK80 565 aa12.28□□□□□ -0.44
ALMS1-205ENST00000490821 ADGRL3Q9HAR2 1447 aa12.28□□□□□ -0.44
ALMS1-205ENST00000490821 FNBP4Q8N3X1 1017 aaPredicted RBP12.27□□□□□ -0.45
ALMS1-205ENST00000490821 TRPC5Q9UL62 973 aaPredicted RBP12.27□□□□□ -0.45
ALMS1-205ENST00000490821 CACNB1Q02641 598 aaPredicted RBP12.26□□□□□ -0.45
ALMS1-205ENST00000490821 METP08581 1390 aa12.26□□□□□ -0.45
ALMS1-205ENST00000490821 PTCH1Q13635 1447 aa12.26□□□□□ -0.45
ALMS1-205ENST00000490821 COL22A1Q8NFW1 1626 aaPredicted RBP12.26□□□□□ -0.45
ALMS1-205ENST00000490821 C1orf167Q5SNV9 1468 aa12.25□□□□□ -0.45
ALMS1-205ENST00000490821 IQGAP3Q86VI3 1631 aa12.25□□□□□ -0.45
ALMS1-205ENST00000490821 LRP5O75197 1615 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms