RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 LTKP29376 864 aa14.1□□□□□ -0.15
SUPT20H-220ENST00000490716 SLC52A1Q9NWF4 448 aa14.09□□□□□ -0.15
SUPT20H-220ENST00000490716 LRRC7Q96NW7 1537 aa14.09□□□□□ -0.15
SUPT20H-220ENST00000490716 PLEKHG1Q9ULL1 1385 aa14.09□□□□□ -0.15
SUPT20H-220ENST00000490716 LAMC1P11047 1609 aa14.08□□□□□ -0.16
SUPT20H-220ENST00000490716 ASXL1Q8IXJ9 1541 aa14.07□□□□□ -0.16
SUPT20H-220ENST00000490716 ESF1Q9H501 851 aaKnown RBP14.06□□□□□ -0.16
SUPT20H-220ENST00000490716 RAB3GAP2Q9H2M9 1393 aa14.06□□□□□ -0.16
SUPT20H-220ENST00000490716 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
SUPT20H-220ENST00000490716 NKTRP30414 1462 aaKnown RBP14.05□□□□□ -0.16
SUPT20H-220ENST00000490716 THEMISQ8N1K5 641 aaPredicted RBP14.05□□□□□ -0.16
SUPT20H-220ENST00000490716 RIMS2Q9UQ26 1411 aa14.04□□□□□ -0.16
SUPT20H-220ENST00000490716 NALCNQ8IZF0 1738 aa14.03□□□□□ -0.16
SUPT20H-220ENST00000490716 PTPRUQ92729 1446 aa14.02□□□□□ -0.16
SUPT20H-220ENST00000490716 KIAA1210Q9ULL0 1709 aa14.02□□□□□ -0.16
SUPT20H-220ENST00000490716 MYOM2P54296 1465 aa14.02□□□□□ -0.16
SUPT20H-220ENST00000490716 ANKRD30BQ9BXX2 1392 aa14.01□□□□□ -0.17
SUPT20H-220ENST00000490716 ACIN1Q9UKV3 1341 aaKnown RBP14.01□□□□□ -0.17
SUPT20H-220ENST00000490716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14□□□□□ -0.17
SUPT20H-220ENST00000490716 SIPA1L2Q9P2F8 1722 aaPredicted RBP14□□□□□ -0.17
SUPT20H-220ENST00000490716 ZNF335Q9H4Z2 1342 aaPredicted RBP13.99□□□□□ -0.17
SUPT20H-220ENST00000490716 PIK3R4Q99570 1358 aa13.98□□□□□ -0.17
SUPT20H-220ENST00000490716 ADGRB1O14514 1584 aa13.98□□□□□ -0.17
SUPT20H-220ENST00000490716 PIK3C2GO75747 1445 aa13.98□□□□□ -0.17
SUPT20H-220ENST00000490716 ANKLE2Q86XL3 938 aa13.98□□□□□ -0.17
SUPT20H-220ENST00000490716 CERKQ8TCT0 537 aa13.98□□□□□ -0.17
SUPT20H-220ENST00000490716 NCOA3Q9Y6Q9 1424 aa13.98□□□□□ -0.17
SUPT20H-220ENST00000490716 PLPPR3Q6T4P5 718 aa13.95□□□□□ -0.18
SUPT20H-220ENST00000490716 MPHOSPH9Q99550 1183 aa13.95□□□□□ -0.18
SUPT20H-220ENST00000490716 TECPR2O15040 1411 aa13.95□□□□□ -0.18
SUPT20H-220ENST00000490716 NHSL1Q5SYE7 1610 aa13.93□□□□□ -0.18
SUPT20H-220ENST00000490716 ITGAEP38570 1179 aa13.93□□□□□ -0.18
SUPT20H-220ENST00000490716 FBXO41Q8TF61 875 aa13.93□□□□□ -0.18
SUPT20H-220ENST00000490716 PTCH1Q13635 1447 aa13.92□□□□□ -0.18
SUPT20H-220ENST00000490716 ADGRB2O60241 1585 aa13.91□□□□□ -0.18
SUPT20H-220ENST00000490716 ARHGEF28Q8N1W1 1705 aaKnown RBP13.91□□□□□ -0.18
SUPT20H-220ENST00000490716 ROBO1Q9Y6N7 1651 aa13.9□□□□□ -0.18
SUPT20H-220ENST00000490716 ILDR1Q86SU0 546 aaPredicted RBP13.9□□□□□ -0.18
SUPT20H-220ENST00000490716 TBX22Q9Y458 520 aa13.9□□□□□ -0.18
SUPT20H-220ENST00000490716 RPGRIP1LQ68CZ1 1315 aa13.9□□□□□ -0.18
SUPT20H-220ENST00000490716 DHX57Q6P158 1386 aaKnown RBP13.9□□□□□ -0.18
SUPT20H-220ENST00000490716 METP08581 1390 aa13.89□□□□□ -0.19
SUPT20H-220ENST00000490716 TXNDC2Q86VQ3 553 aa13.89□□□□□ -0.19
SUPT20H-220ENST00000490716 DLC1Q96QB1 1528 aa13.89□□□□□ -0.19
SUPT20H-220ENST00000490716 FMN2Q9NZ56 1722 aa13.88□□□□□ -0.19
SUPT20H-220ENST00000490716 TRPM1Q7Z4N2 1603 aa13.88□□□□□ -0.19
SUPT20H-220ENST00000490716 AHDC1Q5TGY3 1603 aaPredicted RBP13.88□□□□□ -0.19
SUPT20H-220ENST00000490716 COL16A1Q07092 1604 aaPredicted RBP13.87□□□□□ -0.19
SUPT20H-220ENST00000490716 USP32Q8NFA0 1604 aa13.87□□□□□ -0.19
SUPT20H-220ENST00000490716 DCCP43146 1447 aa13.87□□□□□ -0.19
SUPT20H-220ENST00000490716 KCNA6P17658 529 aa13.86□□□□□ -0.19
SUPT20H-220ENST00000490716 CCDC144AA2RUR9 1427 aa13.86□□□□□ -0.19
SUPT20H-220ENST00000490716 CDC42BPGQ6DT37 1551 aa13.86□□□□□ -0.19
SUPT20H-220ENST00000490716 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.85□□□□□ -0.19
SUPT20H-220ENST00000490716 FOXD1Q16676 465 aa13.85□□□□□ -0.19
SUPT20H-220ENST00000490716 SLC4A1APQ9BWU0 796 aaKnown RBP13.85□□□□□ -0.19
SUPT20H-220ENST00000490716 SHPRHQ149N8 1683 aa13.84□□□□□ -0.19
SUPT20H-220ENST00000490716 TOPAZ1Q8N9V7 1692 aa13.84□□□□□ -0.19
SUPT20H-220ENST00000490716 RGPD8O14715 1765 aaPredicted RBP13.83□□□□□ -0.2
SUPT20H-220ENST00000490716 CRYBG1Q9Y4K1 1723 aa13.82□□□□□ -0.2
SUPT20H-220ENST00000490716 COL22A1Q8NFW1 1626 aaPredicted RBP13.81□□□□□ -0.2
SUPT20H-220ENST00000490716 FAM135BQ49AJ0 1406 aa13.81□□□□□ -0.2
SUPT20H-220ENST00000490716 EID1Q9Y6B2 187 aa13.8□□□□□ -0.2
SUPT20H-220ENST00000490716 ADGRF5Q8IZF2 1346 aa13.8□□□□□ -0.2
SUPT20H-220ENST00000490716 TMEM94Q12767 1356 aa13.79□□□□□ -0.2
SUPT20H-220ENST00000490716 PHLPP1O60346 1717 aa13.78□□□□□ -0.2
SUPT20H-220ENST00000490716 ROBO2Q9HCK4 1378 aa13.78□□□□□ -0.2
SUPT20H-220ENST00000490716 MST1RQ04912 1400 aa13.78□□□□□ -0.2
SUPT20H-220ENST00000490716 ADGRL3Q9HAR2 1447 aa13.78□□□□□ -0.2
SUPT20H-220ENST00000490716 TRPM3Q9HCF6 1732 aaPredicted RBP13.77□□□□□ -0.2
SUPT20H-220ENST00000490716 ABCC11Q96J66 1382 aa13.76□□□□□ -0.21
SUPT20H-220ENST00000490716 ABCA3Q99758 1704 aa13.76□□□□□ -0.21
SUPT20H-220ENST00000490716 LRPPRCP42704 1394 aaKnown RBP13.75□□□□□ -0.21
SUPT20H-220ENST00000490716 SLC26A8Q96RN1 970 aa13.75□□□□□ -0.21
SUPT20H-220ENST00000490716 MARF1Q9Y4F3 1742 aaKnown RBP13.75□□□□□ -0.21
SUPT20H-220ENST00000490716 SIRT1Q96EB6 747 aa13.74□□□□□ -0.21
SUPT20H-220ENST00000490716 C14orf93Q9H972 538 aaKnown RBP13.74□□□□□ -0.21
SUPT20H-220ENST00000490716 KIF1AQ12756 1690 aa13.74□□□□□ -0.21
SUPT20H-220ENST00000490716 TRIM52Q96A61 297 aa13.74□□□□□ -0.21
SUPT20H-220ENST00000490716 HDGFP51858 240 aaKnown RBP13.73□□□□□ -0.21
SUPT20H-220ENST00000490716 YTHDC2Q9H6S0 1430 aaKnown RBP13.73□□□□□ -0.21
SUPT20H-220ENST00000490716 MED1Q15648 1581 aaPredicted RBP13.72□□□□□ -0.21
SUPT20H-220ENST00000490716 VGFO15240 615 aaPredicted RBP13.71□□□□□ -0.21
SUPT20H-220ENST00000490716 ALS2Q96Q42 1657 aa13.71□□□□□ -0.21
SUPT20H-220ENST00000490716 QRICH2Q9H0J4 1663 aa13.71□□□□□ -0.22
SUPT20H-220ENST00000490716 STAC3Q96MF2 364 aa13.7□□□□□ -0.22
SUPT20H-220ENST00000490716 ITSN1Q15811 1721 aa13.7□□□□□ -0.22
SUPT20H-220ENST00000490716 USP54Q70EL1 1684 aa13.69□□□□□ -0.22
SUPT20H-220ENST00000490716 NUTM2DQ5VT03 806 aaPredicted RBP13.69□□□□□ -0.22
SUPT20H-220ENST00000490716 AMOTL2Q9Y2J4 779 aa13.69□□□□□ -0.22
SUPT20H-220ENST00000490716 PXDNQ92626 1479 aa13.68□□□□□ -0.22
SUPT20H-220ENST00000490716 GPRASP1Q5JY77 1395 aa13.68□□□□□ -0.22
SUPT20H-220ENST00000490716 STAG3Q9UJ98 1225 aa13.67□□□□□ -0.22
SUPT20H-220ENST00000490716 PLEKHH1Q9ULM0 1364 aa13.66□□□□□ -0.22
SUPT20H-220ENST00000490716 C1orf167Q5SNV9 1468 aa13.66□□□□□ -0.22
SUPT20H-220ENST00000490716 TRIM26Q12899 539 aaPredicted RBP13.66□□□□□ -0.22
SUPT20H-220ENST00000490716 AKAP12Q02952 1782 aa13.66□□□□□ -0.22
SUPT20H-220ENST00000490716 NRKQ7Z2Y5 1582 aa13.66□□□□□ -0.22
SUPT20H-220ENST00000490716 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.62□□□□□ -0.23
SUPT20H-220ENST00000490716 TULP4Q9NRJ4 1543 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms