RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 NUTM2AQ8IVF1 878 aaPredicted RBP22.06■■□□□ 1.12
EXOSC3-207ENST00000490516 BCANQ96GW7 911 aa22.06■■□□□ 1.12
EXOSC3-207ENST00000490516 RGS12O14924 1447 aa22.04■■□□□ 1.12
EXOSC3-207ENST00000490516 AFF2P51816 1311 aa22.04■■□□□ 1.12
EXOSC3-207ENST00000490516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.03■■□□□ 1.12
EXOSC3-207ENST00000490516 DIP2AQ14689 1571 aa22.03■■□□□ 1.12
EXOSC3-207ENST00000490516 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.03■■□□□ 1.12
EXOSC3-207ENST00000490516 ADGRB3O60242 1522 aa22.01■■□□□ 1.11
EXOSC3-207ENST00000490516 MYO5BQ9ULV0 1848 aa21.99■■□□□ 1.11
EXOSC3-207ENST00000490516 C14orf37Q86TY3 774 aa21.99■■□□□ 1.11
EXOSC3-207ENST00000490516 NUTM2DQ5VT03 806 aaPredicted RBP21.98■■□□□ 1.11
EXOSC3-207ENST00000490516 KIF15Q9NS87 1388 aa21.96■■□□□ 1.11
EXOSC3-207ENST00000490516 ERBINQ96RT1 1412 aa21.96■■□□□ 1.11
EXOSC3-207ENST00000490516 QTRT2Q9H974 415 aaKnown RBP21.95■■□□□ 1.1
EXOSC3-207ENST00000490516 NCOA3Q9Y6Q9 1424 aa21.95■■□□□ 1.1
EXOSC3-207ENST00000490516 CADPS2Q86UW7 1296 aa21.94■■□□□ 1.1
EXOSC3-207ENST00000490516 SETBP1Q9Y6X0 1596 aa21.94■■□□□ 1.1
EXOSC3-207ENST00000490516 ATF3P18847 181 aa21.93■■□□□ 1.1
EXOSC3-207ENST00000490516 RBM6P78332 1123 aaKnown RBP21.93■■□□□ 1.1
EXOSC3-207ENST00000490516 KANK1Q14678 1352 aa21.93■■□□□ 1.1
EXOSC3-207ENST00000490516 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
EXOSC3-207ENST00000490516 PLEKHG1Q9ULL1 1385 aa21.93■■□□□ 1.1
EXOSC3-207ENST00000490516 ZFYVE9O95405 1425 aa21.92■■□□□ 1.1
EXOSC3-207ENST00000490516 NOS1P29475 1434 aa21.92■■□□□ 1.1
EXOSC3-207ENST00000490516 BRINP3Q76B58 766 aa21.92■■□□□ 1.1
EXOSC3-207ENST00000490516 CROCC2H7BZ55 1655 aa21.91■■□□□ 1.1
EXOSC3-207ENST00000490516 LMTK2Q8IWU2 1503 aa21.91■■□□□ 1.1
EXOSC3-207ENST00000490516 C8orf37Q96NL8 207 aa21.91■■□□□ 1.1
EXOSC3-207ENST00000490516 C19orf44Q9H6X5 657 aa21.91■■□□□ 1.1
EXOSC3-207ENST00000490516 ZRANB1Q9UGI0 708 aa21.91■■□□□ 1.1
EXOSC3-207ENST00000490516 MYOM3Q5VTT5 1437 aa21.89■■□□□ 1.1
EXOSC3-207ENST00000490516 GCC2Q8IWJ2 1684 aa21.89■■□□□ 1.1
EXOSC3-207ENST00000490516 PPP1R15AO75807 674 aaPredicted RBP21.88■■□□□ 1.09
EXOSC3-207ENST00000490516 ATAD2Q6PL18 1390 aa21.87■■□□□ 1.09
EXOSC3-207ENST00000490516 TBX22Q9Y458 520 aa21.87■■□□□ 1.09
EXOSC3-207ENST00000490516 SETD5Q9C0A6 1442 aa21.87■■□□□ 1.09
EXOSC3-207ENST00000490516 RIMS2Q9UQ26 1411 aa21.87■■□□□ 1.09
EXOSC3-207ENST00000490516 NHSL1Q5SYE7 1610 aa21.87■■□□□ 1.09
EXOSC3-207ENST00000490516 ASXL1Q8IXJ9 1541 aa21.86■■□□□ 1.09
EXOSC3-207ENST00000490516 SLC52A1Q9NWF4 448 aa21.86■■□□□ 1.09
EXOSC3-207ENST00000490516 ABCC5O15440 1437 aa21.83■■□□□ 1.09
EXOSC3-207ENST00000490516 ADAMTS13Q76LX8 1427 aa21.82■■□□□ 1.08
EXOSC3-207ENST00000490516 TMEM131LA2VDJ0 1609 aa21.82■■□□□ 1.08
EXOSC3-207ENST00000490516 FOXD1Q16676 465 aa21.81■■□□□ 1.08
EXOSC3-207ENST00000490516 NGLY1Q96IV0 654 aa21.81■■□□□ 1.08
EXOSC3-207ENST00000490516 LRRC59Q96AG4 307 aaKnown RBP21.8■■□□□ 1.08
EXOSC3-207ENST00000490516 PNPLA6Q8IY17 1366 aa21.79■■□□□ 1.08
EXOSC3-207ENST00000490516 HDGFP51858 240 aaKnown RBP21.79■■□□□ 1.08
EXOSC3-207ENST00000490516 DDX17Q92841 729 aaKnown RBP21.79■■□□□ 1.08
EXOSC3-207ENST00000490516 EP400Q96L91 3159 aa21.79■■□□□ 1.08
EXOSC3-207ENST00000490516 ADAMTS2O95450 1211 aa21.77■■□□□ 1.08
EXOSC3-207ENST00000490516 KANK4Q5T7N3 995 aaPredicted RBP21.77■■□□□ 1.08
EXOSC3-207ENST00000490516 MST1RQ04912 1400 aa21.76■■□□□ 1.07
EXOSC3-207ENST00000490516 PTPRUQ92729 1446 aa21.76■■□□□ 1.07
EXOSC3-207ENST00000490516 PIK3R4Q99570 1358 aa21.75■■□□□ 1.07
EXOSC3-207ENST00000490516 DCCP43146 1447 aa21.75■■□□□ 1.07
EXOSC3-207ENST00000490516 AMOTL2Q9Y2J4 779 aa21.75■■□□□ 1.07
EXOSC3-207ENST00000490516 DAPK1P53355 1430 aa21.74■■□□□ 1.07
EXOSC3-207ENST00000490516 TRPM2O94759 1503 aa21.73■■□□□ 1.07
EXOSC3-207ENST00000490516 PTPN23Q9H3S7 1636 aa21.73■■□□□ 1.07
EXOSC3-207ENST00000490516 CHGAP10645 457 aaKnown RBP21.72■■□□□ 1.07
EXOSC3-207ENST00000490516 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.72■■□□□ 1.07
EXOSC3-207ENST00000490516 USP21Q9UK80 565 aa21.72■■□□□ 1.07
EXOSC3-207ENST00000490516 CHIC2Q9UKJ5 165 aa21.72■■□□□ 1.07
EXOSC3-207ENST00000490516 RPRD2Q5VT52 1461 aaKnown RBP21.71■■□□□ 1.07
EXOSC3-207ENST00000490516 TRPC5Q9UL62 973 aaPredicted RBP21.69■■□□□ 1.06
EXOSC3-207ENST00000490516 XRN1Q8IZH2 1706 aaKnown RBP21.69■■□□□ 1.06
EXOSC3-207ENST00000490516 ANKRD30AQ9BXX3 1397 aa21.68■■□□□ 1.06
EXOSC3-207ENST00000490516 UNC13BO14795 1591 aa21.67■■□□□ 1.06
EXOSC3-207ENST00000490516 CCDC125Q86Z20 511 aa21.67■■□□□ 1.06
EXOSC3-207ENST00000490516 ATRNO75882 1429 aa21.66■■□□□ 1.06
EXOSC3-207ENST00000490516 LRP5O75197 1615 aa21.64■■□□□ 1.05
EXOSC3-207ENST00000490516 NALCNQ8IZF0 1738 aa21.63■■□□□ 1.05
EXOSC3-207ENST00000490516 FNBP4Q8N3X1 1017 aaPredicted RBP21.63■■□□□ 1.05
EXOSC3-207ENST00000490516 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
EXOSC3-207ENST00000490516 NRXN3Q9Y4C0 1643 aa21.62■■□□□ 1.05
EXOSC3-207ENST00000490516 LAMC1P11047 1609 aa21.6■■□□□ 1.05
EXOSC3-207ENST00000490516 PTCH1Q13635 1447 aa21.59■■□□□ 1.05
EXOSC3-207ENST00000490516 ADGRL3Q9HAR2 1447 aa21.59■■□□□ 1.05
EXOSC3-207ENST00000490516 E9PCH4 1651 aa21.59■■□□□ 1.05
EXOSC3-207ENST00000490516 MARF1Q9Y4F3 1742 aaKnown RBP21.56■■□□□ 1.04
EXOSC3-207ENST00000490516 DEFB132Q7Z7B7 95 aa21.56■■□□□ 1.04
EXOSC3-207ENST00000490516 C1orf167Q5SNV9 1468 aa21.56■■□□□ 1.04
EXOSC3-207ENST00000490516 COL22A1Q8NFW1 1626 aaPredicted RBP21.55■■□□□ 1.04
EXOSC3-207ENST00000490516 BCL9LQ86UU0 1499 aa21.55■■□□□ 1.04
EXOSC3-207ENST00000490516 BLMP54132 1417 aaPredicted RBP21.55■■□□□ 1.04
EXOSC3-207ENST00000490516 SOS2Q07890 1332 aaPredicted RBP21.55■■□□□ 1.04
EXOSC3-207ENST00000490516 METP08581 1390 aa21.54■■□□□ 1.04
EXOSC3-207ENST00000490516 BRWD3Q6RI45 1802 aa21.54■■□□□ 1.04
EXOSC3-207ENST00000490516 ADGRL2O95490 1459 aa21.53■■□□□ 1.04
EXOSC3-207ENST00000490516 ANKRD50Q9ULJ7 1429 aa21.53■■□□□ 1.04
EXOSC3-207ENST00000490516 ORAI2Q96SN7 254 aa21.52■■□□□ 1.04
EXOSC3-207ENST00000490516 GJD4Q96KN9 370 aaPredicted RBP21.51■■□□□ 1.03
EXOSC3-207ENST00000490516 MYOM2P54296 1465 aa21.49■■□□□ 1.03
EXOSC3-207ENST00000490516 GLI3P10071 1580 aa21.48■■□□□ 1.03
EXOSC3-207ENST00000490516 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.47■■□□□ 1.03
EXOSC3-207ENST00000490516 IQGAP3Q86VI3 1631 aa21.47■■□□□ 1.03
EXOSC3-207ENST00000490516 PSDA5PKW4 1024 aaPredicted RBP21.46■■□□□ 1.03
EXOSC3-207ENST00000490516 SF3B2Q13435 895 aaKnown RBP21.44■■□□□ 1.02
EXOSC3-207ENST00000490516 RALGAPBQ86X10 1494 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms