RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 MFSD10Q14728 455 aa6.97□□□□□ -1.29
CRNKL1-203ENST00000490258 CTC1Q2NKJ3 1217 aa6.96□□□□□ -1.3
CRNKL1-203ENST00000490258 PPEF1O14829 653 aaPredicted RBP6.95□□□□□ -1.3
CRNKL1-203ENST00000490258 LMOD2Q6P5Q4 547 aa6.95□□□□□ -1.3
CRNKL1-203ENST00000490258 ZSCAN1Q8NBB4 408 aa6.95□□□□□ -1.3
CRNKL1-203ENST00000490258 TATDN2Q93075 761 aa6.95□□□□□ -1.3
CRNKL1-203ENST00000490258 CDCA7LQ96GN5 454 aa6.95□□□□□ -1.3
CRNKL1-203ENST00000490258 NBPF26B4DH59 902 aa6.94□□□□□ -1.3
CRNKL1-203ENST00000490258 C3orf80F5H4A9 247 aa6.94□□□□□ -1.3
CRNKL1-203ENST00000490258 FAM198AQ9UFP1 575 aa6.94□□□□□ -1.3
CRNKL1-203ENST00000490258 PNMA3Q9UL41 463 aa6.94□□□□□ -1.3
CRNKL1-203ENST00000490258 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
CRNKL1-203ENST00000490258 SMCPP49901 116 aaPredicted RBP6.93□□□□□ -1.3
CRNKL1-203ENST00000490258 PRSS12P56730 875 aa6.93□□□□□ -1.3
CRNKL1-203ENST00000490258 TSR1Q2NL82 804 aaKnown RBP6.93□□□□□ -1.3
CRNKL1-203ENST00000490258 PKD2L1Q9P0L9 805 aa6.93□□□□□ -1.3
CRNKL1-203ENST00000490258 FOXC1Q12948 553 aa6.92□□□□□ -1.3
CRNKL1-203ENST00000490258 MAP3K7O43318 606 aa6.91□□□□□ -1.3
CRNKL1-203ENST00000490258 S1PR4O95977 384 aa6.91□□□□□ -1.3
CRNKL1-203ENST00000490258 SNRPBP14678 240 aaKnown RBP6.91□□□□□ -1.3
CRNKL1-203ENST00000490258 EN1Q05925 392 aaPredicted RBP6.91□□□□□ -1.3
CRNKL1-203ENST00000490258 PCDHB3Q9Y5E6 796 aa6.91□□□□□ -1.3
CRNKL1-203ENST00000490258 TLL1O43897 1013 aa6.9□□□□□ -1.3
CRNKL1-203ENST00000490258 SLF2Q8IX21 1173 aa6.9□□□□□ -1.3
CRNKL1-203ENST00000490258 DDX12PQ92771 950 aa6.9□□□□□ -1.3
CRNKL1-203ENST00000490258 BLOC1S3Q6QNY0 202 aa6.89□□□□□ -1.31
CRNKL1-203ENST00000490258 PRR14Q9BWN1 585 aa6.89□□□□□ -1.31
CRNKL1-203ENST00000490258 TOR4AQ9NXH8 423 aa6.89□□□□□ -1.31
CRNKL1-203ENST00000490258 CAMK2BQ13554 666 aa6.88□□□□□ -1.31
CRNKL1-203ENST00000490258 SPRYD3Q8NCJ5 442 aa6.88□□□□□ -1.31
CRNKL1-203ENST00000490258 SLC16A10Q8TF71 515 aa6.88□□□□□ -1.31
CRNKL1-203ENST00000490258 GMPRP36959 345 aa6.87□□□□□ -1.31
CRNKL1-203ENST00000490258 PLA2G2CQ5R387 149 aa6.87□□□□□ -1.31
CRNKL1-203ENST00000490258 SWT1Q5T5J6 900 aaKnown RBP6.87□□□□□ -1.31
CRNKL1-203ENST00000490258 NUDT18Q6ZVK8 323 aa6.87□□□□□ -1.31
CRNKL1-203ENST00000490258 TRIM47Q96LD4 638 aa6.87□□□□□ -1.31
CRNKL1-203ENST00000490258 SENP2Q9HC62 589 aa6.87□□□□□ -1.31
CRNKL1-203ENST00000490258 NBR1Q14596 966 aa6.86□□□□□ -1.31
CRNKL1-203ENST00000490258 CYP4X1Q8N118 509 aa6.86□□□□□ -1.31
CRNKL1-203ENST00000490258 KCTD17Q8N5Z5 321 aa6.86□□□□□ -1.31
CRNKL1-203ENST00000490258 CERKQ8TCT0 537 aa6.86□□□□□ -1.31
CRNKL1-203ENST00000490258 ATP13A2Q9NQ11 1180 aa6.86□□□□□ -1.31
CRNKL1-203ENST00000490258 PAXIP1Q6ZW49 1069 aaPredicted RBP6.85□□□□□ -1.31
CRNKL1-203ENST00000490258 SLC4A3P48751 1232 aa6.84□□□□□ -1.31
CRNKL1-203ENST00000490258 DPYSL4O14531 572 aa6.83□□□□□ -1.32
CRNKL1-203ENST00000490258 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.83□□□□□ -1.32
CRNKL1-203ENST00000490258 IRF7Q92985 503 aa6.81□□□□□ -1.32
CRNKL1-203ENST00000490258 KIFC2Q96AC6 838 aa6.81□□□□□ -1.32
CRNKL1-203ENST00000490258 TSHZ2Q9NRE2 1034 aa6.81□□□□□ -1.32
CRNKL1-203ENST00000490258 ADH1BP00325 375 aa6.8□□□□□ -1.32
CRNKL1-203ENST00000490258 KCNMA1Q12791 1236 aa6.8□□□□□ -1.32
CRNKL1-203ENST00000490258 CFAP44Q96MT7 982 aa6.8□□□□□ -1.32
CRNKL1-203ENST00000490258 NXF1Q9UBU9 619 aaKnown RBP6.8□□□□□ -1.32
CRNKL1-203ENST00000490258 SLC6A16Q9GZN6 736 aa6.79□□□□□ -1.32
CRNKL1-203ENST00000490258 RPIAP49247 311 aa6.78□□□□□ -1.32
CRNKL1-203ENST00000490258 RBM27Q9P2N5 1060 aaKnown RBP6.78□□□□□ -1.32
CRNKL1-203ENST00000490258 ARIH1Q9Y4X5 557 aaPredicted RBP6.78□□□□□ -1.32
CRNKL1-203ENST00000490258 TTC24A2A3L6 582 aaPredicted RBP6.77□□□□□ -1.33
CRNKL1-203ENST00000490258 XP32Q5T750 250 aa6.77□□□□□ -1.33
CRNKL1-203ENST00000490258 NPAS3Q8IXF0 933 aa6.77□□□□□ -1.33
CRNKL1-203ENST00000490258 CD2BP2O95400 341 aaKnown RBP6.76□□□□□ -1.33
CRNKL1-203ENST00000490258 GSK3AP49840 483 aa6.76□□□□□ -1.33
CRNKL1-203ENST00000490258 PLCB2Q00722 1185 aa6.76□□□□□ -1.33
CRNKL1-203ENST00000490258 KRTAP4-8Q9BYQ9 185 aa6.75□□□□□ -1.33
CRNKL1-203ENST00000490258 ACTN4O43707 911 aaKnown RBP6.74□□□□□ -1.33
CRNKL1-203ENST00000490258 SMPD1P17405 629 aa6.73□□□□□ -1.33
CRNKL1-203ENST00000490258 TMEM151AQ8N4L1 468 aa6.73□□□□□ -1.33
CRNKL1-203ENST00000490258 NR1I2O75469 434 aa6.72□□□□□ -1.33
CRNKL1-203ENST00000490258 PDIA6Q15084 440 aa6.72□□□□□ -1.33
CRNKL1-203ENST00000490258 KMT5BQ4FZB7 885 aa6.72□□□□□ -1.33
CRNKL1-203ENST00000490258 H3BM21 787 aa6.71□□□□□ -1.34
CRNKL1-203ENST00000490258 PRIM1P49642 420 aaKnown RBP6.71□□□□□ -1.34
CRNKL1-203ENST00000490258 TTC13Q8NBP0 860 aa6.71□□□□□ -1.34
CRNKL1-203ENST00000490258 ERBB4Q15303 1308 aa6.71□□□□□ -1.34
CRNKL1-203ENST00000490258 GDF11O95390 407 aa6.7□□□□□ -1.34
CRNKL1-203ENST00000490258 VEGFBP49765 207 aa6.7□□□□□ -1.34
CRNKL1-203ENST00000490258 E2F4Q16254 413 aa6.69□□□□□ -1.34
CRNKL1-203ENST00000490258 SNIP1Q8TAD8 396 aaKnown RBP6.69□□□□□ -1.34
CRNKL1-203ENST00000490258 CDHR5Q9HBB8 845 aa6.69□□□□□ -1.34
CRNKL1-203ENST00000490258 KCNV2Q8TDN2 545 aa6.68□□□□□ -1.34
CRNKL1-203ENST00000490258 EYA1Q99502 592 aa6.68□□□□□ -1.34
CRNKL1-203ENST00000490258 RASSF7Q02833 373 aa6.67□□□□□ -1.34
CRNKL1-203ENST00000490258 PADI6Q6TGC4 694 aa6.67□□□□□ -1.34
CRNKL1-203ENST00000490258 SPSB2Q99619 263 aa6.66□□□□□ -1.34
CRNKL1-203ENST00000490258 KDM2AQ9Y2K7 1162 aa6.66□□□□□ -1.34
CRNKL1-203ENST00000490258 FCF1Q9Y324 198 aaKnown RBP6.66□□□□□ -1.34
CRNKL1-203ENST00000490258 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.65□□□□□ -1.34
CRNKL1-203ENST00000490258 J3QL48 77 aa6.65□□□□□ -1.34
CRNKL1-203ENST00000490258 WNT7AO00755 349 aa6.65□□□□□ -1.34
CRNKL1-203ENST00000490258 CFHP08603 1231 aa6.65□□□□□ -1.34
CRNKL1-203ENST00000490258 SCUBE3Q8IX30 993 aa6.65□□□□□ -1.34
CRNKL1-203ENST00000490258 HPS1Q92902 700 aa6.65□□□□□ -1.34
CRNKL1-203ENST00000490258 SPDYE16A6NNV3 312 aaPredicted RBP6.64□□□□□ -1.35
CRNKL1-203ENST00000490258 KRTAP9-2Q9BYQ4 174 aa6.64□□□□□ -1.35
CRNKL1-203ENST00000490258 GRXCR2A6NFK2 248 aa6.62□□□□□ -1.35
CRNKL1-203ENST00000490258 RNF225M0QZC1 329 aaPredicted RBP6.61□□□□□ -1.35
CRNKL1-203ENST00000490258 IGHA1P01876 353 aa6.61□□□□□ -1.35
CRNKL1-203ENST00000490258 OSBPP22059 807 aa6.61□□□□□ -1.35
CRNKL1-203ENST00000490258 DNAJB2P25686 324 aa6.61□□□□□ -1.35
CRNKL1-203ENST00000490258 ARHGEF1Q92888 912 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms