RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 MFSD10Q14728 455 aa6.97□□□□□ -1.29
CRNKL1-203ENST00000490258 CTC1Q2NKJ3 1217 aa6.96□□□□□ -1.3
CRNKL1-203ENST00000490258 PPEF1O14829 653 aaPredicted RBP6.95□□□□□ -1.3
CRNKL1-203ENST00000490258 LMOD2Q6P5Q4 547 aa6.95□□□□□ -1.3
CRNKL1-203ENST00000490258 ZSCAN1Q8NBB4 408 aa6.95□□□□□ -1.3
CRNKL1-203ENST00000490258 TATDN2Q93075 761 aa6.95□□□□□ -1.3
CRNKL1-203ENST00000490258 CDCA7LQ96GN5 454 aa6.95□□□□□ -1.3
CRNKL1-203ENST00000490258 NBPF26B4DH59 902 aa6.94□□□□□ -1.3
CRNKL1-203ENST00000490258 C3orf80F5H4A9 247 aa6.94□□□□□ -1.3
CRNKL1-203ENST00000490258 FAM198AQ9UFP1 575 aa6.94□□□□□ -1.3
CRNKL1-203ENST00000490258 PNMA3Q9UL41 463 aa6.94□□□□□ -1.3
CRNKL1-203ENST00000490258 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
CRNKL1-203ENST00000490258 SMCPP49901 116 aaPredicted RBP6.93□□□□□ -1.3
CRNKL1-203ENST00000490258 PRSS12P56730 875 aa6.93□□□□□ -1.3
CRNKL1-203ENST00000490258 TSR1Q2NL82 804 aaKnown RBP6.93□□□□□ -1.3
CRNKL1-203ENST00000490258 PKD2L1Q9P0L9 805 aa6.93□□□□□ -1.3
CRNKL1-203ENST00000490258 FOXC1Q12948 553 aa6.92□□□□□ -1.3
CRNKL1-203ENST00000490258 MAP3K7O43318 606 aa6.91□□□□□ -1.3
CRNKL1-203ENST00000490258 S1PR4O95977 384 aa6.91□□□□□ -1.3
CRNKL1-203ENST00000490258 SNRPBP14678 240 aaKnown RBP6.91□□□□□ -1.3
CRNKL1-203ENST00000490258 EN1Q05925 392 aaPredicted RBP6.91□□□□□ -1.3
CRNKL1-203ENST00000490258 PCDHB3Q9Y5E6 796 aa6.91□□□□□ -1.3
CRNKL1-203ENST00000490258 TLL1O43897 1013 aa6.9□□□□□ -1.3
CRNKL1-203ENST00000490258 SLF2Q8IX21 1173 aa6.9□□□□□ -1.3
CRNKL1-203ENST00000490258 DDX12PQ92771 950 aa6.9□□□□□ -1.3
CRNKL1-203ENST00000490258 BLOC1S3Q6QNY0 202 aa6.89□□□□□ -1.31
CRNKL1-203ENST00000490258 PRR14Q9BWN1 585 aa6.89□□□□□ -1.31
CRNKL1-203ENST00000490258 TOR4AQ9NXH8 423 aa6.89□□□□□ -1.31
CRNKL1-203ENST00000490258 CAMK2BQ13554 666 aa6.88□□□□□ -1.31
CRNKL1-203ENST00000490258 SPRYD3Q8NCJ5 442 aa6.88□□□□□ -1.31
CRNKL1-203ENST00000490258 SLC16A10Q8TF71 515 aa6.88□□□□□ -1.31
CRNKL1-203ENST00000490258 GMPRP36959 345 aa6.87□□□□□ -1.31
CRNKL1-203ENST00000490258 PLA2G2CQ5R387 149 aa6.87□□□□□ -1.31
CRNKL1-203ENST00000490258 SWT1Q5T5J6 900 aaKnown RBP6.87□□□□□ -1.31
CRNKL1-203ENST00000490258 NUDT18Q6ZVK8 323 aa6.87□□□□□ -1.31
CRNKL1-203ENST00000490258 TRIM47Q96LD4 638 aa6.87□□□□□ -1.31
CRNKL1-203ENST00000490258 SENP2Q9HC62 589 aa6.87□□□□□ -1.31
CRNKL1-203ENST00000490258 NBR1Q14596 966 aa6.86□□□□□ -1.31
CRNKL1-203ENST00000490258 CYP4X1Q8N118 509 aa6.86□□□□□ -1.31
CRNKL1-203ENST00000490258 KCTD17Q8N5Z5 321 aa6.86□□□□□ -1.31
CRNKL1-203ENST00000490258 CERKQ8TCT0 537 aa6.86□□□□□ -1.31
CRNKL1-203ENST00000490258 ATP13A2Q9NQ11 1180 aa6.86□□□□□ -1.31
CRNKL1-203ENST00000490258 PAXIP1Q6ZW49 1069 aaPredicted RBP6.85□□□□□ -1.31
CRNKL1-203ENST00000490258 SLC4A3P48751 1232 aa6.84□□□□□ -1.31
CRNKL1-203ENST00000490258 DPYSL4O14531 572 aa6.83□□□□□ -1.32
CRNKL1-203ENST00000490258 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.83□□□□□ -1.32
CRNKL1-203ENST00000490258 IRF7Q92985 503 aa6.81□□□□□ -1.32
CRNKL1-203ENST00000490258 KIFC2Q96AC6 838 aa6.81□□□□□ -1.32
CRNKL1-203ENST00000490258 TSHZ2Q9NRE2 1034 aa6.81□□□□□ -1.32
CRNKL1-203ENST00000490258 ADH1BP00325 375 aa6.8□□□□□ -1.32
CRNKL1-203ENST00000490258 KCNMA1Q12791 1236 aa6.8□□□□□ -1.32
CRNKL1-203ENST00000490258 CFAP44Q96MT7 982 aa6.8□□□□□ -1.32
CRNKL1-203ENST00000490258 NXF1Q9UBU9 619 aaKnown RBP6.8□□□□□ -1.32
CRNKL1-203ENST00000490258 SLC6A16Q9GZN6 736 aa6.79□□□□□ -1.32
CRNKL1-203ENST00000490258 RPIAP49247 311 aa6.78□□□□□ -1.32
CRNKL1-203ENST00000490258 RBM27Q9P2N5 1060 aaKnown RBP6.78□□□□□ -1.32
CRNKL1-203ENST00000490258 ARIH1Q9Y4X5 557 aaPredicted RBP6.78□□□□□ -1.32
CRNKL1-203ENST00000490258 TTC24A2A3L6 582 aaPredicted RBP6.77□□□□□ -1.33
CRNKL1-203ENST00000490258 XP32Q5T750 250 aa6.77□□□□□ -1.33
CRNKL1-203ENST00000490258 NPAS3Q8IXF0 933 aa6.77□□□□□ -1.33
CRNKL1-203ENST00000490258 CD2BP2O95400 341 aaKnown RBP6.76□□□□□ -1.33
CRNKL1-203ENST00000490258 GSK3AP49840 483 aa6.76□□□□□ -1.33
CRNKL1-203ENST00000490258 PLCB2Q00722 1185 aa6.76□□□□□ -1.33
CRNKL1-203ENST00000490258 KRTAP4-8Q9BYQ9 185 aa6.75□□□□□ -1.33
CRNKL1-203ENST00000490258 ACTN4O43707 911 aaKnown RBP6.74□□□□□ -1.33
CRNKL1-203ENST00000490258 SMPD1P17405 629 aa6.73□□□□□ -1.33
CRNKL1-203ENST00000490258 TMEM151AQ8N4L1 468 aa6.73□□□□□ -1.33
CRNKL1-203ENST00000490258 NR1I2O75469 434 aa6.72□□□□□ -1.33
CRNKL1-203ENST00000490258 PDIA6Q15084 440 aa6.72□□□□□ -1.33
CRNKL1-203ENST00000490258 KMT5BQ4FZB7 885 aa6.72□□□□□ -1.33
CRNKL1-203ENST00000490258 H3BM21 787 aa6.71□□□□□ -1.34
CRNKL1-203ENST00000490258 PRIM1P49642 420 aaKnown RBP6.71□□□□□ -1.34
CRNKL1-203ENST00000490258 TTC13Q8NBP0 860 aa6.71□□□□□ -1.34
CRNKL1-203ENST00000490258 ERBB4Q15303 1308 aa6.71□□□□□ -1.34
CRNKL1-203ENST00000490258 GDF11O95390 407 aa6.7□□□□□ -1.34
CRNKL1-203ENST00000490258 VEGFBP49765 207 aa6.7□□□□□ -1.34
CRNKL1-203ENST00000490258 E2F4Q16254 413 aa6.69□□□□□ -1.34
CRNKL1-203ENST00000490258 SNIP1Q8TAD8 396 aaKnown RBP6.69□□□□□ -1.34
CRNKL1-203ENST00000490258 CDHR5Q9HBB8 845 aa6.69□□□□□ -1.34
CRNKL1-203ENST00000490258 KCNV2Q8TDN2 545 aa6.68□□□□□ -1.34
CRNKL1-203ENST00000490258 EYA1Q99502 592 aa6.68□□□□□ -1.34
CRNKL1-203ENST00000490258 RASSF7Q02833 373 aa6.67□□□□□ -1.34
CRNKL1-203ENST00000490258 PADI6Q6TGC4 694 aa6.67□□□□□ -1.34
CRNKL1-203ENST00000490258 SPSB2Q99619 263 aa6.66□□□□□ -1.34
CRNKL1-203ENST00000490258 KDM2AQ9Y2K7 1162 aa6.66□□□□□ -1.34
CRNKL1-203ENST00000490258 FCF1Q9Y324 198 aaKnown RBP6.66□□□□□ -1.34
CRNKL1-203ENST00000490258 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.65□□□□□ -1.34
CRNKL1-203ENST00000490258 J3QL48 77 aa6.65□□□□□ -1.34
CRNKL1-203ENST00000490258 WNT7AO00755 349 aa6.65□□□□□ -1.34
CRNKL1-203ENST00000490258 CFHP08603 1231 aa6.65□□□□□ -1.34
CRNKL1-203ENST00000490258 SCUBE3Q8IX30 993 aa6.65□□□□□ -1.34
CRNKL1-203ENST00000490258 HPS1Q92902 700 aa6.65□□□□□ -1.34
CRNKL1-203ENST00000490258 SPDYE16A6NNV3 312 aaPredicted RBP6.64□□□□□ -1.35
CRNKL1-203ENST00000490258 KRTAP9-2Q9BYQ4 174 aa6.64□□□□□ -1.35
CRNKL1-203ENST00000490258 GRXCR2A6NFK2 248 aa6.62□□□□□ -1.35
CRNKL1-203ENST00000490258 RNF225M0QZC1 329 aaPredicted RBP6.61□□□□□ -1.35
CRNKL1-203ENST00000490258 IGHA1P01876 353 aa6.61□□□□□ -1.35
CRNKL1-203ENST00000490258 OSBPP22059 807 aa6.61□□□□□ -1.35
CRNKL1-203ENST00000490258 DNAJB2P25686 324 aa6.61□□□□□ -1.35
CRNKL1-203ENST00000490258 ARHGEF1Q92888 912 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms