RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 SLC4A3P48751 1232 aa10.02□□□□□ -0.81
HMGN1-218ENST00000490032 APLP1P51693 650 aa10.01□□□□□ -0.81
HMGN1-218ENST00000490032 KCNC4Q03721 635 aa9.99□□□□□ -0.81
HMGN1-218ENST00000490032 TJAP1Q5JTD0 557 aa9.99□□□□□ -0.81
HMGN1-218ENST00000490032 A0A0G2JS52 829 aa9.98□□□□□ -0.81
HMGN1-218ENST00000490032 MAP2K5Q13163 448 aa9.97□□□□□ -0.81
HMGN1-218ENST00000490032 LMOD2Q6P5Q4 547 aa9.97□□□□□ -0.81
HMGN1-218ENST00000490032 PRR14Q9BWN1 585 aa9.96□□□□□ -0.82
HMGN1-218ENST00000490032 SLC10A3P09131 477 aa9.95□□□□□ -0.82
HMGN1-218ENST00000490032 PHOX2BQ99453 314 aa9.95□□□□□ -0.82
HMGN1-218ENST00000490032 MTRQ99707 1265 aa9.95□□□□□ -0.82
HMGN1-218ENST00000490032 IL21Q9HBE4 155 aa9.95□□□□□ -0.82
HMGN1-218ENST00000490032 DAXXQ9UER7 740 aaPredicted RBP9.94□□□□□ -0.82
HMGN1-218ENST00000490032 MINK1Q8N4C8 1332 aaPredicted RBP9.93□□□□□ -0.82
HMGN1-218ENST00000490032 IRF6O14896 467 aa9.93□□□□□ -0.82
HMGN1-218ENST00000490032 ACTN4O43707 911 aaKnown RBP9.91□□□□□ -0.82
HMGN1-218ENST00000490032 RGS20O76081 388 aa9.91□□□□□ -0.82
HMGN1-218ENST00000490032 CFHP08603 1231 aa9.91□□□□□ -0.82
HMGN1-218ENST00000490032 KMT5BQ4FZB7 885 aa9.91□□□□□ -0.82
HMGN1-218ENST00000490032 NLRP7Q8WX94 980 aa9.9□□□□□ -0.82
HMGN1-218ENST00000490032 RSPH4AQ5TD94 716 aa9.89□□□□□ -0.83
HMGN1-218ENST00000490032 ZNF516Q92618 1163 aa9.89□□□□□ -0.83
HMGN1-218ENST00000490032 PCDHB3Q9Y5E6 796 aa9.89□□□□□ -0.83
HMGN1-218ENST00000490032 SLC24A1O60721 1099 aa9.88□□□□□ -0.83
HMGN1-218ENST00000490032 CCDC102AQ96A19 550 aa9.88□□□□□ -0.83
HMGN1-218ENST00000490032 COPS2P61201 443 aa9.87□□□□□ -0.83
HMGN1-218ENST00000490032 ZC3H15Q8WU90 426 aaKnown RBP9.87□□□□□ -0.83
HMGN1-218ENST00000490032 ZPR1O75312 459 aa9.86□□□□□ -0.83
HMGN1-218ENST00000490032 ZMYND10O75800 440 aa9.86□□□□□ -0.83
HMGN1-218ENST00000490032 BLOC1S3Q6QNY0 202 aa9.86□□□□□ -0.83
HMGN1-218ENST00000490032 BARGINQ6ZT62 677 aa9.86□□□□□ -0.83
HMGN1-218ENST00000490032 SULF1Q8IWU6 871 aa9.86□□□□□ -0.83
HMGN1-218ENST00000490032 DDX11L8A8MPP1 907 aa9.84□□□□□ -0.83
HMGN1-218ENST00000490032 RDH13Q8NBN7 331 aa9.83□□□□□ -0.84
HMGN1-218ENST00000490032 NKX2-3Q8TAU0 364 aa9.82□□□□□ -0.84
HMGN1-218ENST00000490032 GCGRP47871 477 aa9.81□□□□□ -0.84
HMGN1-218ENST00000490032 MDM2Q00987 491 aaPredicted RBP9.8□□□□□ -0.84
HMGN1-218ENST00000490032 PPP1R18Q6NYC8 613 aa9.8□□□□□ -0.84
HMGN1-218ENST00000490032 TMUB1Q9BVT8 246 aa9.8□□□□□ -0.84
HMGN1-218ENST00000490032 NR1I2O75469 434 aa9.79□□□□□ -0.84
HMGN1-218ENST00000490032 CD46P15529 392 aa9.79□□□□□ -0.84
HMGN1-218ENST00000490032 KRI1Q8N9T8 703 aaKnown RBP9.79□□□□□ -0.84
HMGN1-218ENST00000490032 CLCN1P35523 988 aa9.78□□□□□ -0.84
HMGN1-218ENST00000490032 GPCPD1Q9NPB8 672 aa9.78□□□□□ -0.84
HMGN1-218ENST00000490032 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.78□□□□□ -0.84
HMGN1-218ENST00000490032 TLL1O43897 1013 aa9.77□□□□□ -0.85
HMGN1-218ENST00000490032 FUT2Q10981 343 aa9.77□□□□□ -0.85
HMGN1-218ENST00000490032 PUS10Q3MIT2 529 aaKnown RBP9.77□□□□□ -0.85
HMGN1-218ENST00000490032 ATP6V1AP38606 617 aa9.76□□□□□ -0.85
HMGN1-218ENST00000490032 MORN1Q5T089 497 aa9.76□□□□□ -0.85
HMGN1-218ENST00000490032 SCUBE3Q8IX30 993 aa9.76□□□□□ -0.85
HMGN1-218ENST00000490032 GGCXP38435 758 aa9.75□□□□□ -0.85
HMGN1-218ENST00000490032 AMHR2Q16671 573 aa9.75□□□□□ -0.85
HMGN1-218ENST00000490032 FAM217BQ9NTX9 383 aaPredicted RBP9.75□□□□□ -0.85
HMGN1-218ENST00000490032 ADH1BP00325 375 aa9.74□□□□□ -0.85
HMGN1-218ENST00000490032 REPIN1Q9BWE0 567 aaKnown RBP9.74□□□□□ -0.85
HMGN1-218ENST00000490032 BCANQ96GW7 911 aa9.73□□□□□ -0.85
HMGN1-218ENST00000490032 GRIPAP1Q4V328 841 aa9.71□□□□□ -0.86
HMGN1-218ENST00000490032 THAP11Q96EK4 314 aa9.71□□□□□ -0.86
HMGN1-218ENST00000490032 SLC27A5Q9Y2P5 690 aa9.71□□□□□ -0.86
HMGN1-218ENST00000490032 SALL2Q9Y467 1007 aaPredicted RBP9.71□□□□□ -0.86
HMGN1-218ENST00000490032 KDM4AO75164 1064 aa9.7□□□□□ -0.86
HMGN1-218ENST00000490032 RNF223E7ERA6 249 aa9.69□□□□□ -0.86
HMGN1-218ENST00000490032 TRIM66O15016 1216 aa9.69□□□□□ -0.86
HMGN1-218ENST00000490032 S1PR4O95977 384 aa9.69□□□□□ -0.86
HMGN1-218ENST00000490032 USP46P62068 366 aa9.69□□□□□ -0.86
HMGN1-218ENST00000490032 AK7Q96M32 723 aa9.69□□□□□ -0.86
HMGN1-218ENST00000490032 SPSB2Q99619 263 aa9.69□□□□□ -0.86
HMGN1-218ENST00000490032 V9GY48 417 aaPredicted RBP9.69□□□□□ -0.86
HMGN1-218ENST00000490032 ANKLE1Q8NAG6 615 aa9.68□□□□□ -0.86
HMGN1-218ENST00000490032 PRKD2Q9BZL6 878 aa9.68□□□□□ -0.86
HMGN1-218ENST00000490032 SLC6A16Q9GZN6 736 aa9.68□□□□□ -0.86
HMGN1-218ENST00000490032 SSTR3P32745 418 aaPredicted RBP9.67□□□□□ -0.86
HMGN1-218ENST00000490032 BRICD5Q6PL45 260 aa9.67□□□□□ -0.86
HMGN1-218ENST00000490032 FMNL1O95466 1100 aaPredicted RBP9.66□□□□□ -0.86
HMGN1-218ENST00000490032 TTLL12Q14166 644 aaPredicted RBP9.66□□□□□ -0.86
HMGN1-218ENST00000490032 GIGYF2Q6Y7W6 1299 aaKnown RBP9.66□□□□□ -0.86
HMGN1-218ENST00000490032 HOXA2O43364 376 aa9.65□□□□□ -0.86
HMGN1-218ENST00000490032 IRX2Q9BZI1 471 aaPredicted RBP9.65□□□□□ -0.86
HMGN1-218ENST00000490032 Q3C1V9 767 aa9.64□□□□□ -0.87
HMGN1-218ENST00000490032 PARP9Q8IXQ6 854 aa9.64□□□□□ -0.87
HMGN1-218ENST00000490032 FAM160A2Q8N612 972 aaPredicted RBP9.64□□□□□ -0.87
HMGN1-218ENST00000490032 EMID1Q96A84 441 aaPredicted RBP9.64□□□□□ -0.87
HMGN1-218ENST00000490032 PPEF1O14829 653 aaPredicted RBP9.63□□□□□ -0.87
HMGN1-218ENST00000490032 MSS51Q4VC12 460 aa9.63□□□□□ -0.87
HMGN1-218ENST00000490032 RNF19BQ6ZMZ0 732 aa9.63□□□□□ -0.87
HMGN1-218ENST00000490032 NUTM1Q86Y26 1132 aa9.62□□□□□ -0.87
HMGN1-218ENST00000490032 HLA-CQ95604 372 aa9.62□□□□□ -0.87
HMGN1-218ENST00000490032 SLC24A3Q9HC58 644 aa9.62□□□□□ -0.87
HMGN1-218ENST00000490032 PDE4DQ08499 809 aa9.6□□□□□ -0.87
HMGN1-218ENST00000490032 SLC19A1P41440 591 aa9.59□□□□□ -0.87
HMGN1-218ENST00000490032 SPIRE2Q8WWL2 714 aa9.59□□□□□ -0.87
HMGN1-218ENST00000490032 MS4A1P11836 297 aa9.58□□□□□ -0.88
HMGN1-218ENST00000490032 GUCA2AQ02747 115 aa9.58□□□□□ -0.88
HMGN1-218ENST00000490032 PLA2G2CQ5R387 149 aa9.58□□□□□ -0.88
HMGN1-218ENST00000490032 LIAT1Q6ZQX7 453 aa9.58□□□□□ -0.88
HMGN1-218ENST00000490032 BEGAINQ9BUH8 593 aa9.58□□□□□ -0.88
HMGN1-218ENST00000490032 PRDM9Q9NQV7 894 aa9.58□□□□□ -0.88
HMGN1-218ENST00000490032 SPRYD7Q5W111 196 aa9.57□□□□□ -0.88
HMGN1-218ENST00000490032 USB1Q9BQ65 265 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms