RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 COL17A1Q9UMD9 1497 aaPredicted RBP16.07■□□□□ 0.16
AC055748.1-201ENST00000489836 CDK13Q14004 1512 aaKnown RBP16.07■□□□□ 0.16
AC055748.1-201ENST00000489836 KDM6BO15054 1643 aa16.07■□□□□ 0.16
AC055748.1-201ENST00000489836 HECW1Q76N89 1606 aa16.07■□□□□ 0.16
AC055748.1-201ENST00000489836 ABCA9Q8IUA7 1624 aa16.07■□□□□ 0.16
AC055748.1-201ENST00000489836 CASKIN1Q8WXD9 1431 aa16.06■□□□□ 0.16
AC055748.1-201ENST00000489836 KDM4FA0A1W2PPD8 638 aa16.06■□□□□ 0.16
AC055748.1-201ENST00000489836 LOC105371045A0A1W2PR82 267 aa16.04■□□□□ 0.16
AC055748.1-201ENST00000489836 TBC1D12O60347 775 aa16.04■□□□□ 0.16
AC055748.1-201ENST00000489836 EMILIN3Q9NT22 766 aa16.03■□□□□ 0.16
AC055748.1-201ENST00000489836 ATP1B4Q9UN42 357 aaPredicted RBP16.03■□□□□ 0.16
AC055748.1-201ENST00000489836 CEP162Q5TB80 1403 aa16.02■□□□□ 0.15
AC055748.1-201ENST00000489836 CDK11AQ9UQ88 783 aaPredicted RBP16.01■□□□□ 0.15
AC055748.1-201ENST00000489836 PHLDB1Q86UU1 1377 aa16■□□□□ 0.15
AC055748.1-201ENST00000489836 ZNF687Q8N1G0 1237 aa16■□□□□ 0.15
AC055748.1-201ENST00000489836 PCF11O94913 1555 aaKnown RBP16■□□□□ 0.15
AC055748.1-201ENST00000489836 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.99■□□□□ 0.15
AC055748.1-201ENST00000489836 FYCO1Q9BQS8 1478 aa15.99■□□□□ 0.15
AC055748.1-201ENST00000489836 CCDC18Q5T9S5 1454 aa15.98■□□□□ 0.15
AC055748.1-201ENST00000489836 TROQ12816 1431 aaPredicted RBP15.98■□□□□ 0.15
AC055748.1-201ENST00000489836 ARAP3Q8WWN8 1544 aa15.98■□□□□ 0.15
AC055748.1-201ENST00000489836 LRRIQ1Q96JM4 1722 aa15.97■□□□□ 0.15
AC055748.1-201ENST00000489836 TSHZ2Q9NRE2 1034 aa15.97■□□□□ 0.15
AC055748.1-201ENST00000489836 NEO1Q92859 1461 aa15.97■□□□□ 0.15
AC055748.1-201ENST00000489836 TTC37Q6PGP7 1564 aa15.93■□□□□ 0.14
AC055748.1-201ENST00000489836 MAP3K9P80192 1104 aa15.93■□□□□ 0.14
AC055748.1-201ENST00000489836 PLCH2O75038 1416 aa15.93■□□□□ 0.14
AC055748.1-201ENST00000489836 CAMK2BQ13554 666 aa15.92■□□□□ 0.14
AC055748.1-201ENST00000489836 EVI5O60447 810 aa15.91■□□□□ 0.14
AC055748.1-201ENST00000489836 POTEEQ6S8J3 1075 aa15.9■□□□□ 0.14
AC055748.1-201ENST00000489836 AKNAQ7Z591 1439 aa15.9■□□□□ 0.14
AC055748.1-201ENST00000489836 FANCAO15360 1455 aa15.9■□□□□ 0.14
AC055748.1-201ENST00000489836 SPNS2Q8IVW8 549 aa15.89■□□□□ 0.13
AC055748.1-201ENST00000489836 AXIN2Q9Y2T1 843 aa15.89■□□□□ 0.13
AC055748.1-201ENST00000489836 KIF14Q15058 1648 aa15.89■□□□□ 0.13
AC055748.1-201ENST00000489836 DPYSL4O14531 572 aa15.86■□□□□ 0.13
AC055748.1-201ENST00000489836 RAPGEF3O95398 923 aa15.86■□□□□ 0.13
AC055748.1-201ENST00000489836 EFCAB2Q5VUJ9 269 aa15.85■□□□□ 0.13
AC055748.1-201ENST00000489836 VPS8Q8N3P4 1428 aa15.85■□□□□ 0.13
AC055748.1-201ENST00000489836 DENND4BO75064 1496 aaPredicted RBP15.84■□□□□ 0.13
AC055748.1-201ENST00000489836 CFAP74Q9C0B2 1584 aa15.84■□□□□ 0.13
AC055748.1-201ENST00000489836 PSDA5PKW4 1024 aaPredicted RBP15.84■□□□□ 0.13
AC055748.1-201ENST00000489836 PLCB2Q00722 1185 aa15.84■□□□□ 0.13
AC055748.1-201ENST00000489836 ANO8Q9HCE9 1232 aaPredicted RBP15.84■□□□□ 0.13
AC055748.1-201ENST00000489836 WDR70Q9NW82 654 aa15.84■□□□□ 0.13
AC055748.1-201ENST00000489836 FRMPD1Q5SYB0 1578 aa15.83■□□□□ 0.13
AC055748.1-201ENST00000489836 ZNF454Q8N9F8 522 aa15.83■□□□□ 0.12
AC055748.1-201ENST00000489836 PPP4R3BQ5MIZ7 849 aa15.82■□□□□ 0.12
AC055748.1-201ENST00000489836 SCAPERQ9BY12 1400 aa15.81■□□□□ 0.12
AC055748.1-201ENST00000489836 MYO5CQ9NQX4 1742 aa15.81■□□□□ 0.12
AC055748.1-201ENST00000489836 MTUS2Q5JR59 1369 aa15.8■□□□□ 0.12
AC055748.1-201ENST00000489836 E2F4Q16254 413 aa15.8■□□□□ 0.12
AC055748.1-201ENST00000489836 ADGRL1O94910 1474 aa15.79■□□□□ 0.12
AC055748.1-201ENST00000489836 ANKRD13DQ6ZTN6 518 aa15.79■□□□□ 0.12
AC055748.1-201ENST00000489836 RICTORQ6R327 1708 aa15.78■□□□□ 0.12
AC055748.1-201ENST00000489836 ARHGAP5Q13017 1502 aa15.78■□□□□ 0.12
AC055748.1-201ENST00000489836 GPATCH8Q9UKJ3 1502 aaKnown RBP15.78■□□□□ 0.12
AC055748.1-201ENST00000489836 CDC42BPBQ9Y5S2 1711 aa15.77■□□□□ 0.12
AC055748.1-201ENST00000489836 PREX2Q70Z35 1606 aa15.77■□□□□ 0.12
AC055748.1-201ENST00000489836 PBX2P40425 430 aa15.77■□□□□ 0.12
AC055748.1-201ENST00000489836 PSEN2P49810 448 aa15.77■□□□□ 0.12
AC055748.1-201ENST00000489836 FOSBP53539 338 aa15.77■□□□□ 0.12
AC055748.1-201ENST00000489836 LSM11P83369 360 aaKnown RBP eCLIP15.77■□□□□ 0.12
AC055748.1-201ENST00000489836 MMRN1Q13201 1228 aa15.77■□□□□ 0.12
AC055748.1-201ENST00000489836 ZMYM4Q5VZL5 1548 aa15.77■□□□□ 0.11
AC055748.1-201ENST00000489836 POGZQ7Z3K3 1410 aa15.77■□□□□ 0.11
AC055748.1-201ENST00000489836 EHBP1L1Q8N3D4 1523 aa15.76■□□□□ 0.11
AC055748.1-201ENST00000489836 MAP3K1Q13233 1512 aa15.75■□□□□ 0.11
AC055748.1-201ENST00000489836 MAGI2Q86UL8 1455 aa15.75■□□□□ 0.11
AC055748.1-201ENST00000489836 TIAM1Q13009 1591 aa15.75■□□□□ 0.11
AC055748.1-201ENST00000489836 ARHGAP33O14559 1287 aa15.74■□□□□ 0.11
AC055748.1-201ENST00000489836 CDC42BPAQ5VT25 1732 aa15.74■□□□□ 0.11
AC055748.1-201ENST00000489836 CCNB3Q8WWL7 1395 aa15.73■□□□□ 0.11
AC055748.1-201ENST00000489836 ARHGEF12Q9NZN5 1544 aa15.73■□□□□ 0.11
AC055748.1-201ENST00000489836 DMRTA1Q5VZB9 504 aa15.72■□□□□ 0.11
AC055748.1-201ENST00000489836 ZNF518AQ6AHZ1 1483 aa15.71■□□□□ 0.11
AC055748.1-201ENST00000489836 AFAP1Q8N556 730 aa15.71■□□□□ 0.11
AC055748.1-201ENST00000489836 KCNK17Q96T54 332 aa15.71■□□□□ 0.11
AC055748.1-201ENST00000489836 ABCC1P33527 1531 aa15.71■□□□□ 0.11
AC055748.1-201ENST00000489836 LRRC9Q6ZRR7 1453 aa15.71■□□□□ 0.1
AC055748.1-201ENST00000489836 KDM5CP41229 1560 aa15.7■□□□□ 0.1
AC055748.1-201ENST00000489836 YEATS2Q9ULM3 1422 aa15.7■□□□□ 0.1
AC055748.1-201ENST00000489836 ARHGEF40Q8TER5 1519 aa15.7■□□□□ 0.1
AC055748.1-201ENST00000489836 CFDP1Q9UEE9 299 aaPredicted RBP15.7■□□□□ 0.1
AC055748.1-201ENST00000489836 PCDHGA10Q9Y5H3 936 aa15.7■□□□□ 0.1
AC055748.1-201ENST00000489836 KIAA1107Q9UPP5 1409 aa15.69■□□□□ 0.1
AC055748.1-201ENST00000489836 TRAPPC8Q9Y2L5 1435 aa15.69■□□□□ 0.1
AC055748.1-201ENST00000489836 KANK4Q5T7N3 995 aaPredicted RBP15.69■□□□□ 0.1
AC055748.1-201ENST00000489836 ADAM33Q9BZ11 813 aa15.69■□□□□ 0.1
AC055748.1-201ENST00000489836 NCOA2Q15596 1464 aa15.69■□□□□ 0.1
AC055748.1-201ENST00000489836 ZFYVE16Q7Z3T8 1539 aa15.68■□□□□ 0.1
AC055748.1-201ENST00000489836 SAMD9LQ8IVG5 1584 aa15.68■□□□□ 0.1
AC055748.1-201ENST00000489836 ZDHHC16Q969W1 377 aa15.68■□□□□ 0.1
AC055748.1-201ENST00000489836 MLH3Q9UHC1 1453 aa15.67■□□□□ 0.1
AC055748.1-201ENST00000489836 BCL2L12Q9HB09 334 aa15.67■□□□□ 0.1
AC055748.1-201ENST00000489836 PDIA6Q15084 440 aa15.66■□□□□ 0.1
AC055748.1-201ENST00000489836 DDX12PQ92771 950 aa15.66■□□□□ 0.1
AC055748.1-201ENST00000489836 ZNF777Q9ULD5 760 aaPredicted RBP15.66■□□□□ 0.1
AC055748.1-201ENST00000489836 SUPT6HQ7KZ85 1726 aaKnown RBP15.65■□□□□ 0.1
AC055748.1-201ENST00000489836 PLEKHH2Q8IVE3 1493 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms