RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 ADAMTS8Q9UP79 889 aa14.41□□□□□ -0.1
NEB-215ENST00000489048 SPHKAPQ2M3C7 1700 aa14.41□□□□□ -0.1
NEB-215ENST00000489048 NEFMP07197 916 aa14.41□□□□□ -0.1
NEB-215ENST00000489048 STAC3Q96MF2 364 aa14.4□□□□□ -0.1
NEB-215ENST00000489048 TRPM2O94759 1503 aa14.4□□□□□ -0.1
NEB-215ENST00000489048 PPP2R1AP30153 589 aa14.4□□□□□ -0.1
NEB-215ENST00000489048 AMER1Q5JTC6 1135 aaPredicted RBP14.4□□□□□ -0.1
NEB-215ENST00000489048 ASXL1Q8IXJ9 1541 aa14.4□□□□□ -0.1
NEB-215ENST00000489048 ABCC2Q92887 1545 aa14.4□□□□□ -0.1
NEB-215ENST00000489048 SCAF11Q99590 1463 aaKnown RBP14.39□□□□□ -0.11
NEB-215ENST00000489048 MYOM1P52179 1685 aa14.39□□□□□ -0.11
NEB-215ENST00000489048 LAS1LQ9Y4W2 734 aaKnown RBP14.39□□□□□ -0.11
NEB-215ENST00000489048 CEP152O94986 1710 aa14.39□□□□□ -0.11
NEB-215ENST00000489048 C20orf194Q5TEA3 1177 aa14.38□□□□□ -0.11
NEB-215ENST00000489048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.38□□□□□ -0.11
NEB-215ENST00000489048 NEURL4Q96JN8 1562 aa14.37□□□□□ -0.11
NEB-215ENST00000489048 EIF3AQ14152 1382 aaKnown RBP14.37□□□□□ -0.11
NEB-215ENST00000489048 CDCA8Q53HL2 280 aa14.37□□□□□ -0.11
NEB-215ENST00000489048 KIAA1210Q9ULL0 1709 aa14.37□□□□□ -0.11
NEB-215ENST00000489048 TRMT2AQ8IZ69 625 aaKnown RBP14.37□□□□□ -0.11
NEB-215ENST00000489048 KNSTRNQ9Y448 316 aa14.37□□□□□ -0.11
NEB-215ENST00000489048 ABCC1P33527 1531 aa14.37□□□□□ -0.11
NEB-215ENST00000489048 PTPRTO14522 1441 aa14.37□□□□□ -0.11
NEB-215ENST00000489048 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.36□□□□□ -0.11
NEB-215ENST00000489048 WDR43Q15061 677 aaKnown RBP eCLIP14.36□□□□□ -0.11
NEB-215ENST00000489048 PLCH2O75038 1416 aa14.36□□□□□ -0.11
NEB-215ENST00000489048 GOLGA2Q08379 1002 aa14.35□□□□□ -0.11
NEB-215ENST00000489048 FAM161AQ3B820 660 aa14.35□□□□□ -0.11
NEB-215ENST00000489048 SLFN5Q08AF3 891 aa14.35□□□□□ -0.11
NEB-215ENST00000489048 DEPDC5O75140 1603 aa14.34□□□□□ -0.11
NEB-215ENST00000489048 C8orf34Q49A92 452 aa14.34□□□□□ -0.11
NEB-215ENST00000489048 SKAP1Q86WV1 359 aa14.33□□□□□ -0.12
NEB-215ENST00000489048 SENP3Q9H4L4 574 aaPredicted RBP14.33□□□□□ -0.12
NEB-215ENST00000489048 RTEL1-TNFRSF6BF6WH68 1400 aa14.33□□□□□ -0.12
NEB-215ENST00000489048 CLTCL1P53675 1640 aa14.32□□□□□ -0.12
NEB-215ENST00000489048 KDM5AP29375 1690 aaKnown RBP14.32□□□□□ -0.12
NEB-215ENST00000489048 NKTRP30414 1462 aaKnown RBP14.32□□□□□ -0.12
NEB-215ENST00000489048 NGEFQ8N5V2 710 aa14.31□□□□□ -0.12
NEB-215ENST00000489048 CHD1O14646 1710 aa14.31□□□□□ -0.12
NEB-215ENST00000489048 TET3O43151 1660 aa14.31□□□□□ -0.12
NEB-215ENST00000489048 ARAP3Q8WWN8 1544 aa14.31□□□□□ -0.12
NEB-215ENST00000489048 VWDEQ8N2E2 1590 aa14.3□□□□□ -0.12
NEB-215ENST00000489048 VIRMAQ69YN4 1812 aaKnown RBP14.29□□□□□ -0.12
NEB-215ENST00000489048 ZFYVE16Q7Z3T8 1539 aa14.29□□□□□ -0.12
NEB-215ENST00000489048 TRAPPC8Q9Y2L5 1435 aa14.29□□□□□ -0.12
NEB-215ENST00000489048 NFKBIBQ15653 356 aa14.28□□□□□ -0.12
NEB-215ENST00000489048 UHRF1BP1LA0JNW5 1464 aa14.28□□□□□ -0.12
NEB-215ENST00000489048 SLC24A1O60721 1099 aa14.28□□□□□ -0.12
NEB-215ENST00000489048 NINLQ9Y2I6 1382 aa14.28□□□□□ -0.12
NEB-215ENST00000489048 MYOM2P54296 1465 aa14.28□□□□□ -0.12
NEB-215ENST00000489048 EFCAB2Q5VUJ9 269 aa14.28□□□□□ -0.12
NEB-215ENST00000489048 IL27Q8NEV9 243 aa14.27□□□□□ -0.12
NEB-215ENST00000489048 ZCCHC11Q5TAX3 1644 aaKnown RBP14.27□□□□□ -0.13
NEB-215ENST00000489048 GSE1Q14687 1217 aa14.27□□□□□ -0.13
NEB-215ENST00000489048 E9PSI1 815 aa14.26□□□□□ -0.13
NEB-215ENST00000489048 PLPPR3Q6T4P5 718 aa14.26□□□□□ -0.13
NEB-215ENST00000489048 MYO3AQ8NEV4 1616 aa14.26□□□□□ -0.13
NEB-215ENST00000489048 MAP3K4Q9Y6R4 1608 aa14.25□□□□□ -0.13
NEB-215ENST00000489048 ERVK-7P63135 1459 aa14.25□□□□□ -0.13
NEB-215ENST00000489048 SPINK5Q9NQ38 1064 aaPredicted RBP14.23□□□□□ -0.13
NEB-215ENST00000489048 DAXXQ9UER7 740 aaPredicted RBP14.23□□□□□ -0.13
NEB-215ENST00000489048 ABCA6Q8N139 1617 aa14.23□□□□□ -0.13
NEB-215ENST00000489048 PDE3AQ14432 1141 aa14.23□□□□□ -0.13
NEB-215ENST00000489048 POLR3AO14802 1390 aaPredicted RBP14.23□□□□□ -0.13
NEB-215ENST00000489048 ILDR1Q86SU0 546 aaPredicted RBP14.22□□□□□ -0.13
NEB-215ENST00000489048 CGNL1Q0VF96 1302 aa14.22□□□□□ -0.13
NEB-215ENST00000489048 INO80Q9ULG1 1556 aaPredicted RBP14.22□□□□□ -0.13
NEB-215ENST00000489048 SBNO2Q9Y2G9 1366 aa14.22□□□□□ -0.13
NEB-215ENST00000489048 IFT172Q9UG01 1749 aa14.22□□□□□ -0.13
NEB-215ENST00000489048 APAF1O14727 1248 aa14.22□□□□□ -0.13
NEB-215ENST00000489048 SPAG9O60271 1321 aaKnown RBP14.21□□□□□ -0.13
NEB-215ENST00000489048 NRXN1Q9ULB1 1477 aa14.21□□□□□ -0.13
NEB-215ENST00000489048 SLC4A3P48751 1232 aa14.21□□□□□ -0.14
NEB-215ENST00000489048 CCDC146Q8IYE0 955 aa14.21□□□□□ -0.14
NEB-215ENST00000489048 ZMYM3Q14202 1370 aa14.2□□□□□ -0.14
NEB-215ENST00000489048 BCAR3O75815 825 aa14.2□□□□□ -0.14
NEB-215ENST00000489048 SHPRHQ149N8 1683 aa14.19□□□□□ -0.14
NEB-215ENST00000489048 MROH1Q8NDA8 1641 aa14.19□□□□□ -0.14
NEB-215ENST00000489048 KANK1Q14678 1352 aa14.19□□□□□ -0.14
NEB-215ENST00000489048 USP19O94966 1318 aa14.19□□□□□ -0.14
NEB-215ENST00000489048 MAPK8IP3Q9UPT6 1336 aa14.19□□□□□ -0.14
NEB-215ENST00000489048 AAMPQ13685 434 aa14.19□□□□□ -0.14
NEB-215ENST00000489048 ATP7AQ04656 1500 aa14.18□□□□□ -0.14
NEB-215ENST00000489048 RGS3P49796 1198 aa14.18□□□□□ -0.14
NEB-215ENST00000489048 SETBP1Q9Y6X0 1596 aa14.18□□□□□ -0.14
NEB-215ENST00000489048 FRAT1Q92837 279 aaPredicted RBP14.18□□□□□ -0.14
NEB-215ENST00000489048 IQSEC2Q5JU85 1478 aa14.18□□□□□ -0.14
NEB-215ENST00000489048 IGHDP01880 384 aa14.17□□□□□ -0.14
NEB-215ENST00000489048 CARD14Q9BXL6 1004 aa14.17□□□□□ -0.14
NEB-215ENST00000489048 ABCA9Q8IUA7 1624 aa14.17□□□□□ -0.14
NEB-215ENST00000489048 NLRP1Q9C000 1473 aa14.16□□□□□ -0.14
NEB-215ENST00000489048 USP32Q8NFA0 1604 aa14.16□□□□□ -0.14
NEB-215ENST00000489048 CLUAP1Q96AJ1 413 aa14.16□□□□□ -0.14
NEB-215ENST00000489048 KIF1BO60333 1816 aa14.16□□□□□ -0.14
NEB-215ENST00000489048 CENPJQ9HC77 1338 aaPredicted RBP14.16□□□□□ -0.14
NEB-215ENST00000489048 DMRT2Q9Y5R5 561 aa14.16□□□□□ -0.14
NEB-215ENST00000489048 EFCAB6Q5THR3 1501 aa14.15□□□□□ -0.14
NEB-215ENST00000489048 WWC1Q8IX03 1113 aa14.15□□□□□ -0.14
NEB-215ENST00000489048 ZC3H13Q5T200 1668 aaKnown RBP14.15□□□□□ -0.14
NEB-215ENST00000489048 LMTK2Q8IWU2 1503 aa14.15□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms