RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 FAM163AQ96GL9 167 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC12-221ENST00000489032 DIP2BQ9P265 1576 aa13.62□□□□□ -0.23
TRAPPC12-221ENST00000489032 TRIM66O15016 1216 aa13.62□□□□□ -0.23
TRAPPC12-221ENST00000489032 EMP3P54852 163 aa13.62□□□□□ -0.23
TRAPPC12-221ENST00000489032 MAPKBP1O60336 1514 aa13.62□□□□□ -0.23
TRAPPC12-221ENST00000489032 ABCA10Q8WWZ4 1543 aa13.62□□□□□ -0.23
TRAPPC12-221ENST00000489032 BRPF1P55201 1214 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC12-221ENST00000489032 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
TRAPPC12-221ENST00000489032 TSPOAP1O95153 1857 aa13.59□□□□□ -0.23
TRAPPC12-221ENST00000489032 ADAMTS12P58397 1594 aa13.59□□□□□ -0.23
TRAPPC12-221ENST00000489032 PRG4Q92954 1404 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC12-221ENST00000489032 HECW2Q9P2P5 1572 aa13.58□□□□□ -0.23
TRAPPC12-221ENST00000489032 VARS2Q5ST30 1063 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-221ENST00000489032 PADI6Q6TGC4 694 aa13.58□□□□□ -0.24
TRAPPC12-221ENST00000489032 ADGRL1O94910 1474 aa13.57□□□□□ -0.24
TRAPPC12-221ENST00000489032 PPP1R3GB7ZBB8 358 aa13.57□□□□□ -0.24
TRAPPC12-221ENST00000489032 PRSS12P56730 875 aa13.57□□□□□ -0.24
TRAPPC12-221ENST00000489032 PDE4DQ08499 809 aa13.57□□□□□ -0.24
TRAPPC12-221ENST00000489032 RBM27Q9P2N5 1060 aaKnown RBP13.57□□□□□ -0.24
TRAPPC12-221ENST00000489032 MARVELD3Q96A59 401 aa13.56□□□□□ -0.24
TRAPPC12-221ENST00000489032 CDCA7LQ96GN5 454 aa13.56□□□□□ -0.24
TRAPPC12-221ENST00000489032 KCNK17Q96T54 332 aa13.56□□□□□ -0.24
TRAPPC12-221ENST00000489032 OATP04181 439 aa13.55□□□□□ -0.24
TRAPPC12-221ENST00000489032 FBXO41Q8TF61 875 aa13.54□□□□□ -0.24
TRAPPC12-221ENST00000489032 FHAD1B1AJZ9 1412 aa13.54□□□□□ -0.24
TRAPPC12-221ENST00000489032 FAM205CA6NFA0 338 aa13.53□□□□□ -0.24
TRAPPC12-221ENST00000489032 COL9A1P20849 921 aa13.53□□□□□ -0.24
TRAPPC12-221ENST00000489032 TTLL12Q14166 644 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC12-221ENST00000489032 TOP2BQ02880 1626 aa13.53□□□□□ -0.24
TRAPPC12-221ENST00000489032 BIVM-ERCC5R4GMW8 1640 aa13.52□□□□□ -0.25
TRAPPC12-221ENST00000489032 DAXXQ9UER7 740 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC12-221ENST00000489032 ADCY10Q96PN6 1610 aa13.5□□□□□ -0.25
TRAPPC12-221ENST00000489032 AMHR2Q16671 573 aa13.5□□□□□ -0.25
TRAPPC12-221ENST00000489032 PACS2Q86VP3 889 aa13.5□□□□□ -0.25
TRAPPC12-221ENST00000489032 RBM46Q8TBY0 533 aaKnown RBP13.5□□□□□ -0.25
TRAPPC12-221ENST00000489032 ARHGAP33O14559 1287 aa13.49□□□□□ -0.25
TRAPPC12-221ENST00000489032 GPBP1L1Q9HC44 474 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC12-221ENST00000489032 TMEM132AQ24JP5 1023 aa13.48□□□□□ -0.25
TRAPPC12-221ENST00000489032 KDM4CQ9H3R0 1056 aa13.48□□□□□ -0.25
TRAPPC12-221ENST00000489032 FAM161AQ3B820 660 aa13.47□□□□□ -0.25
TRAPPC12-221ENST00000489032 ADGRG1Q9Y653 693 aa13.47□□□□□ -0.25
TRAPPC12-221ENST00000489032 TRIM6-TRIM34B2RNG4 842 aa13.46□□□□□ -0.25
TRAPPC12-221ENST00000489032 NBPF26B4DH59 902 aa13.46□□□□□ -0.25
TRAPPC12-221ENST00000489032 PBX2P40425 430 aa13.46□□□□□ -0.25
TRAPPC12-221ENST00000489032 ZNF687Q8N1G0 1237 aa13.46□□□□□ -0.25
TRAPPC12-221ENST00000489032 TTC13Q8NBP0 860 aa13.46□□□□□ -0.25
TRAPPC12-221ENST00000489032 PSEN2P49810 448 aa13.45□□□□□ -0.26
TRAPPC12-221ENST00000489032 METTL3Q86U44 580 aaKnown RBP13.45□□□□□ -0.26
TRAPPC12-221ENST00000489032 ERICH3Q5RHP9 1530 aa13.44□□□□□ -0.26
TRAPPC12-221ENST00000489032 CLCN1P35523 988 aa13.44□□□□□ -0.26
TRAPPC12-221ENST00000489032 ONECUT3O60422 494 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC12-221ENST00000489032 HS3ST6Q96QI5 342 aa13.43□□□□□ -0.26
TRAPPC12-221ENST00000489032 TSKSQ9UJT2 592 aa13.43□□□□□ -0.26
TRAPPC12-221ENST00000489032 PNMA3Q9UL41 463 aa13.43□□□□□ -0.26
TRAPPC12-221ENST00000489032 MDM2Q00987 491 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC12-221ENST00000489032 PROX2Q3B8N5 592 aa13.42□□□□□ -0.26
TRAPPC12-221ENST00000489032 PARP9Q8IXQ6 854 aa13.42□□□□□ -0.26
TRAPPC12-221ENST00000489032 PXYLP1Q8TE99 480 aa13.42□□□□□ -0.26
TRAPPC12-221ENST00000489032 AXIN2Q9Y2T1 843 aa13.42□□□□□ -0.26
TRAPPC12-221ENST00000489032 RUSC2Q8N2Y8 1516 aa13.41□□□□□ -0.26
TRAPPC12-221ENST00000489032 NUDT18Q6ZVK8 323 aa13.41□□□□□ -0.26
TRAPPC12-221ENST00000489032 GPCPD1Q9NPB8 672 aa13.41□□□□□ -0.26
TRAPPC12-221ENST00000489032 TATDN2Q93075 761 aa13.4□□□□□ -0.26
TRAPPC12-221ENST00000489032 ZBED2Q9BTP6 218 aa13.4□□□□□ -0.26
TRAPPC12-221ENST00000489032 FAM198AQ9UFP1 575 aa13.39□□□□□ -0.27
TRAPPC12-221ENST00000489032 PPRC1Q5VV67 1664 aaKnown RBP13.39□□□□□ -0.27
TRAPPC12-221ENST00000489032 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-221ENST00000489032 GIGYF2Q6Y7W6 1299 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-221ENST00000489032 IL27Q8NEV9 243 aa13.38□□□□□ -0.27
TRAPPC12-221ENST00000489032 KIAA1468Q9P260 1216 aa13.38□□□□□ -0.27
TRAPPC12-221ENST00000489032 LMTK3Q96Q04 1460 aa13.37□□□□□ -0.27
TRAPPC12-221ENST00000489032 DDRGK1Q96HY6 314 aa13.37□□□□□ -0.27
TRAPPC12-221ENST00000489032 PHOX2BQ99453 314 aa13.37□□□□□ -0.27
TRAPPC12-221ENST00000489032 SLC4A5Q9BY07 1137 aa13.36□□□□□ -0.27
TRAPPC12-221ENST00000489032 GLI2P10070 1586 aa13.36□□□□□ -0.27
TRAPPC12-221ENST00000489032 DMRTA1Q5VZB9 504 aa13.35□□□□□ -0.27
TRAPPC12-221ENST00000489032 RABGEF1Q9UJ41 708 aa13.35□□□□□ -0.27
TRAPPC12-221ENST00000489032 RCCD1A6NED2 376 aa13.34□□□□□ -0.27
TRAPPC12-221ENST00000489032 DNAJB2P25686 324 aa13.34□□□□□ -0.27
TRAPPC12-221ENST00000489032 POTEEQ6S8J3 1075 aa13.34□□□□□ -0.27
TRAPPC12-221ENST00000489032 EYA1Q99502 592 aa13.34□□□□□ -0.27
TRAPPC12-221ENST00000489032 PLB1Q6P1J6 1458 aa13.34□□□□□ -0.27
TRAPPC12-221ENST00000489032 COL17A1Q9UMD9 1497 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-221ENST00000489032 KIF27Q86VH2 1401 aa13.33□□□□□ -0.28
TRAPPC12-221ENST00000489032 SMAPO00193 183 aa13.33□□□□□ -0.28
TRAPPC12-221ENST00000489032 HDGFP51858 240 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-221ENST00000489032 NLRP7Q8WX94 980 aa13.33□□□□□ -0.28
TRAPPC12-221ENST00000489032 ASXL2Q76L83 1435 aa13.32□□□□□ -0.28
TRAPPC12-221ENST00000489032 SSTR3P32745 418 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC12-221ENST00000489032 ABCC2Q92887 1545 aa13.31□□□□□ -0.28
TRAPPC12-221ENST00000489032 FAM117AQ9C073 453 aa13.31□□□□□ -0.28
TRAPPC12-221ENST00000489032 NBPF3Q9H094 633 aa13.31□□□□□ -0.28
TRAPPC12-221ENST00000489032 PTPRGP23470 1445 aa13.3□□□□□ -0.28
TRAPPC12-221ENST00000489032 TEX14Q8IWB6 1497 aa13.3□□□□□ -0.28
TRAPPC12-221ENST00000489032 STAC3Q96MF2 364 aa13.3□□□□□ -0.28
TRAPPC12-221ENST00000489032 REPIN1Q9BWE0 567 aaKnown RBP13.3□□□□□ -0.28
TRAPPC12-221ENST00000489032 VPS9D1Q9Y2B5 631 aa13.3□□□□□ -0.28
TRAPPC12-221ENST00000489032 KIAA0586Q9BVV6 1533 aa13.29□□□□□ -0.28
TRAPPC12-221ENST00000489032 POTEB3A0JP26 581 aa13.29□□□□□ -0.28
TRAPPC12-221ENST00000489032 LCE2DQ5TA82 110 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms