RNA–Protein interactions for RNA: ENST00000488990.5

TRDMT1-210, Transcript of tRNA aspartic acid methyltransferase 1, humanhuman

TSL 2 BASIC

Gene TRDMT1, Length 1,301 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDMT1-210ENST00000488990 SOX12O15370 315 aa13.49□□□□□ -0.25
TRDMT1-210ENST00000488990 CLTCQ00610 1675 aaKnown RBP13.48□□□□□ -0.25
TRDMT1-210ENST00000488990 SYNMO15061 1565 aa13.48□□□□□ -0.25
TRDMT1-210ENST00000488990 KDM5CP41229 1560 aa13.48□□□□□ -0.25
TRDMT1-210ENST00000488990 SEC24BO95487 1268 aa13.47□□□□□ -0.25
TRDMT1-210ENST00000488990 RBM33Q96EV2 1170 aaKnown RBP13.47□□□□□ -0.25
TRDMT1-210ENST00000488990 OCEL1Q9H607 264 aa13.47□□□□□ -0.25
TRDMT1-210ENST00000488990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRDMT1-210ENST00000488990 ZMYM3Q14202 1370 aa13.46□□□□□ -0.25
TRDMT1-210ENST00000488990 P3H3Q8IVL6 736 aa13.46□□□□□ -0.25
TRDMT1-210ENST00000488990 MYT1LQ9UL68 1186 aa13.46□□□□□ -0.25
TRDMT1-210ENST00000488990 XIRP1Q702N8 1843 aaKnown RBP13.46□□□□□ -0.25
TRDMT1-210ENST00000488990 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
TRDMT1-210ENST00000488990 PHF8Q9UPP1 1060 aa13.45□□□□□ -0.26
TRDMT1-210ENST00000488990 ZNF518AQ6AHZ1 1483 aa13.45□□□□□ -0.26
TRDMT1-210ENST00000488990 MFRPQ9BY79 579 aa13.44□□□□□ -0.26
TRDMT1-210ENST00000488990 NUP153P49790 1475 aaKnown RBP13.44□□□□□ -0.26
TRDMT1-210ENST00000488990 PLCG2P16885 1265 aa13.43□□□□□ -0.26
TRDMT1-210ENST00000488990 FAM9AQ8IZU1 332 aaPredicted RBP13.43□□□□□ -0.26
TRDMT1-210ENST00000488990 POTEB2H3BUK9 544 aa13.42□□□□□ -0.26
TRDMT1-210ENST00000488990 AFAP1Q8N556 730 aa13.42□□□□□ -0.26
TRDMT1-210ENST00000488990 PDCD7Q8N8D1 485 aaKnown RBP13.42□□□□□ -0.26
TRDMT1-210ENST00000488990 ROBO1Q9Y6N7 1651 aa13.42□□□□□ -0.26
TRDMT1-210ENST00000488990 A2ML1A8K2U0 1454 aa13.42□□□□□ -0.26
TRDMT1-210ENST00000488990 PLEKHD1A6NEE1 506 aa13.41□□□□□ -0.26
TRDMT1-210ENST00000488990 MYO5CQ9NQX4 1742 aa13.41□□□□□ -0.26
TRDMT1-210ENST00000488990 PLCH2O75038 1416 aa13.41□□□□□ -0.26
TRDMT1-210ENST00000488990 NLRP6P59044 892 aa13.4□□□□□ -0.26
TRDMT1-210ENST00000488990 FBXO22Q8NEZ5 403 aa13.4□□□□□ -0.26
TRDMT1-210ENST00000488990 IQGAP1P46940 1657 aa13.4□□□□□ -0.26
TRDMT1-210ENST00000488990 DPY19L2Q6NUT2 758 aa13.39□□□□□ -0.27
TRDMT1-210ENST00000488990 BBXQ8WY36 941 aaPredicted RBP13.39□□□□□ -0.27
TRDMT1-210ENST00000488990 MS4A4AQ96JQ5 239 aa13.39□□□□□ -0.27
TRDMT1-210ENST00000488990 ITSN2Q9NZM3 1697 aa13.38□□□□□ -0.27
TRDMT1-210ENST00000488990 FAM135BQ49AJ0 1406 aa13.38□□□□□ -0.27
TRDMT1-210ENST00000488990 RXRBP28702 533 aa13.38□□□□□ -0.27
TRDMT1-210ENST00000488990 ZNF772Q68DY9 489 aaPredicted RBP13.38□□□□□ -0.27
TRDMT1-210ENST00000488990 CDK12Q9NYV4 1490 aaPredicted RBP13.38□□□□□ -0.27
TRDMT1-210ENST00000488990 PHLPP1O60346 1717 aa13.36□□□□□ -0.27
TRDMT1-210ENST00000488990 LRP6O75581 1613 aa13.36□□□□□ -0.27
TRDMT1-210ENST00000488990 CDK13Q14004 1512 aaKnown RBP13.36□□□□□ -0.27
TRDMT1-210ENST00000488990 NPHP4O75161 1426 aaPredicted RBP13.36□□□□□ -0.27
TRDMT1-210ENST00000488990 LRP5O75197 1615 aa13.35□□□□□ -0.27
TRDMT1-210ENST00000488990 KIDINS220Q9ULH0 1771 aa13.35□□□□□ -0.27
TRDMT1-210ENST00000488990 POTEJP0CG39 1038 aa13.35□□□□□ -0.27
TRDMT1-210ENST00000488990 MLH3Q9UHC1 1453 aa13.34□□□□□ -0.27
TRDMT1-210ENST00000488990 DEPDC5O75140 1603 aa13.34□□□□□ -0.27
TRDMT1-210ENST00000488990 LHX8Q68G74 356 aa13.34□□□□□ -0.27
TRDMT1-210ENST00000488990 EFCAB2Q5VUJ9 269 aa13.33□□□□□ -0.28
TRDMT1-210ENST00000488990 MED14O60244 1454 aa13.33□□□□□ -0.28
TRDMT1-210ENST00000488990 ANKLE2Q86XL3 938 aa13.32□□□□□ -0.28
TRDMT1-210ENST00000488990 ABCC1P33527 1531 aa13.31□□□□□ -0.28
TRDMT1-210ENST00000488990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRDMT1-210ENST00000488990 RGS12O14924 1447 aa13.31□□□□□ -0.28
TRDMT1-210ENST00000488990 GTPBP6O43824 516 aaPredicted RBP13.31□□□□□ -0.28
TRDMT1-210ENST00000488990 MEX3CQ5U5Q3 659 aaKnown RBP13.31□□□□□ -0.28
TRDMT1-210ENST00000488990 SAMD9Q5K651 1589 aa13.3□□□□□ -0.28
TRDMT1-210ENST00000488990 JCADQ9P266 1359 aa13.3□□□□□ -0.28
TRDMT1-210ENST00000488990 EP400Q96L91 3159 aa13.29□□□□□ -0.28
TRDMT1-210ENST00000488990 NUTM2BA6NNL0 878 aaPredicted RBP13.29□□□□□ -0.28
TRDMT1-210ENST00000488990 NUTM2EB1AL46 878 aaPredicted RBP13.29□□□□□ -0.28
TRDMT1-210ENST00000488990 NUTM2DQ5VT03 806 aaPredicted RBP13.29□□□□□ -0.28
TRDMT1-210ENST00000488990 NUTM2AQ8IVF1 878 aaPredicted RBP13.29□□□□□ -0.28
TRDMT1-210ENST00000488990 L3MBTL3Q96JM7 780 aaPredicted RBP13.29□□□□□ -0.28
TRDMT1-210ENST00000488990 ZC3H13Q5T200 1668 aaKnown RBP13.28□□□□□ -0.28
TRDMT1-210ENST00000488990 PPP1R37O75864 691 aa13.28□□□□□ -0.28
TRDMT1-210ENST00000488990 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.27□□□□□ -0.29
TRDMT1-210ENST00000488990 ARHGAP5Q13017 1502 aa13.27□□□□□ -0.29
TRDMT1-210ENST00000488990 YY1P25490 414 aa13.25□□□□□ -0.29
TRDMT1-210ENST00000488990 COL16A1Q07092 1604 aaPredicted RBP13.25□□□□□ -0.29
TRDMT1-210ENST00000488990 RYDENQ9NUL5 291 aaKnown RBP13.25□□□□□ -0.29
TRDMT1-210ENST00000488990 BOLA1Q9Y3E2 137 aa13.24□□□□□ -0.29
TRDMT1-210ENST00000488990 KIF14Q15058 1648 aa13.23□□□□□ -0.29
TRDMT1-210ENST00000488990 CDC42BPBQ9Y5S2 1711 aa13.22□□□□□ -0.29
TRDMT1-210ENST00000488990 TMEM121BQ9BXQ6 578 aaPredicted RBP13.22□□□□□ -0.29
TRDMT1-210ENST00000488990 ATAD2Q6PL18 1390 aa13.21□□□□□ -0.29
TRDMT1-210ENST00000488990 SPRYD3Q8NCJ5 442 aa13.21□□□□□ -0.29
TRDMT1-210ENST00000488990 TNRQ92752 1358 aa13.21□□□□□ -0.3
TRDMT1-210ENST00000488990 SPATA31A6Q5VVP1 1343 aa13.2□□□□□ -0.3
TRDMT1-210ENST00000488990 UGGT1Q9NYU2 1555 aa13.2□□□□□ -0.3
TRDMT1-210ENST00000488990 PAXIP1Q6ZW49 1069 aaPredicted RBP13.2□□□□□ -0.3
TRDMT1-210ENST00000488990 SHPRHQ149N8 1683 aa13.2□□□□□ -0.3
TRDMT1-210ENST00000488990 MICALL2Q8IY33 904 aa13.19□□□□□ -0.3
TRDMT1-210ENST00000488990 OTUD5Q96G74 571 aa13.19□□□□□ -0.3
TRDMT1-210ENST00000488990 G3V3G9 751 aa13.18□□□□□ -0.3
TRDMT1-210ENST00000488990 MAMSTRQ6ZN01 415 aa13.18□□□□□ -0.3
TRDMT1-210ENST00000488990 THEMISQ8N1K5 641 aaPredicted RBP13.18□□□□□ -0.3
TRDMT1-210ENST00000488990 CFAP44Q96MT7 982 aa13.18□□□□□ -0.3
TRDMT1-210ENST00000488990 AFF2P51816 1311 aa13.18□□□□□ -0.3
TRDMT1-210ENST00000488990 LRRC9Q6ZRR7 1453 aa13.18□□□□□ -0.3
TRDMT1-210ENST00000488990 SENP3-EIF4A1A0A087X0R7 540 aa13.17□□□□□ -0.3
TRDMT1-210ENST00000488990 SUPT5HO00267 1087 aaKnown RBP13.17□□□□□ -0.3
TRDMT1-210ENST00000488990 FBXO31Q5XUX0 539 aaPredicted RBP13.17□□□□□ -0.3
TRDMT1-210ENST00000488990 GGT6Q6P531 493 aa13.17□□□□□ -0.3
TRDMT1-210ENST00000488990 KDM5DQ9BY66 1539 aa13.17□□□□□ -0.3
TRDMT1-210ENST00000488990 FAM135AQ9P2D6 1515 aa13.17□□□□□ -0.3
TRDMT1-210ENST00000488990 PLXNC1O60486 1568 aa13.16□□□□□ -0.3
TRDMT1-210ENST00000488990 MAP3K1Q13233 1512 aa13.15□□□□□ -0.31
TRDMT1-210ENST00000488990 SCUBE2Q9NQ36 999 aa13.14□□□□□ -0.31
TRDMT1-210ENST00000488990 FGD6Q6ZV73 1430 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms