RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 PPEF1O14829 653 aaPredicted RBP7.76□□□□□ -1.17
PRPF4-203ENST00000488937 ATP13A2Q9NQ11 1180 aa7.76□□□□□ -1.17
PRPF4-203ENST00000488937 PDE4AP27815 886 aa7.75□□□□□ -1.17
PRPF4-203ENST00000488937 FOXC1Q12948 553 aa7.75□□□□□ -1.17
PRPF4-203ENST00000488937 IRF7Q92985 503 aa7.75□□□□□ -1.17
PRPF4-203ENST00000488937 KRTAP9-6A0A140TA67 174 aa7.73□□□□□ -1.17
PRPF4-203ENST00000488937 NCKAP5LQ9HCH0 1330 aa7.73□□□□□ -1.17
PRPF4-203ENST00000488937 NPAS3Q8IXF0 933 aa7.72□□□□□ -1.17
PRPF4-203ENST00000488937 TMEM151AQ8N4L1 468 aa7.72□□□□□ -1.17
PRPF4-203ENST00000488937 KIFC2Q96AC6 838 aa7.72□□□□□ -1.17
PRPF4-203ENST00000488937 NXF1Q9UBU9 619 aaKnown RBP7.72□□□□□ -1.17
PRPF4-203ENST00000488937 RGL2O15211 777 aa7.71□□□□□ -1.18
PRPF4-203ENST00000488937 S1PR4O95977 384 aa7.71□□□□□ -1.18
PRPF4-203ENST00000488937 CYP4X1Q8N118 509 aa7.71□□□□□ -1.18
PRPF4-203ENST00000488937 RBM33Q96EV2 1170 aaKnown RBP7.71□□□□□ -1.18
PRPF4-203ENST00000488937 EMILIN3Q9NT22 766 aa7.71□□□□□ -1.18
PRPF4-203ENST00000488937 TATDN2Q93075 761 aa7.7□□□□□ -1.18
PRPF4-203ENST00000488937 RYDENQ9NUL5 291 aaKnown RBP7.7□□□□□ -1.18
PRPF4-203ENST00000488937 NBPF26B4DH59 902 aa7.69□□□□□ -1.18
PRPF4-203ENST00000488937 KRTAP1-3Q8IUG1 177 aa7.69□□□□□ -1.18
PRPF4-203ENST00000488937 PSMG3-AS1Q96PY0 264 aa7.69□□□□□ -1.18
PRPF4-203ENST00000488937 PRR14Q9BWN1 585 aa7.69□□□□□ -1.18
PRPF4-203ENST00000488937 PCDHB3Q9Y5E6 796 aa7.69□□□□□ -1.18
PRPF4-203ENST00000488937 GDF11O95390 407 aa7.68□□□□□ -1.18
PRPF4-203ENST00000488937 PLA2G2CQ5R387 149 aa7.68□□□□□ -1.18
PRPF4-203ENST00000488937 CDCA7LQ96GN5 454 aa7.68□□□□□ -1.18
PRPF4-203ENST00000488937 TLL1O43897 1013 aa7.67□□□□□ -1.18
PRPF4-203ENST00000488937 SLF2Q8IX21 1173 aa7.67□□□□□ -1.18
PRPF4-203ENST00000488937 DDX27Q96GQ7 796 aaKnown RBP7.67□□□□□ -1.18
PRPF4-203ENST00000488937 FAM198AQ9UFP1 575 aa7.67□□□□□ -1.18
PRPF4-203ENST00000488937 C3orf80F5H4A9 247 aa7.66□□□□□ -1.18
PRPF4-203ENST00000488937 PRSS12P56730 875 aa7.66□□□□□ -1.18
PRPF4-203ENST00000488937 PKD2Q13563 968 aa7.66□□□□□ -1.18
PRPF4-203ENST00000488937 BLOC1S3Q6QNY0 202 aa7.66□□□□□ -1.18
PRPF4-203ENST00000488937 PNMA3Q9UL41 463 aa7.66□□□□□ -1.18
PRPF4-203ENST00000488937 HS6ST3Q8IZP7 471 aa7.65□□□□□ -1.18
PRPF4-203ENST00000488937 RASSF7Q02833 373 aa7.64□□□□□ -1.19
PRPF4-203ENST00000488937 H3BM21 787 aa7.62□□□□□ -1.19
PRPF4-203ENST00000488937 EN1Q05925 392 aaPredicted RBP7.62□□□□□ -1.19
PRPF4-203ENST00000488937 TSR1Q2NL82 804 aaKnown RBP7.62□□□□□ -1.19
PRPF4-203ENST00000488937 LARP6Q9BRS8 491 aaKnown RBP7.62□□□□□ -1.19
PRPF4-203ENST00000488937 IGHA1P01876 353 aa7.61□□□□□ -1.19
PRPF4-203ENST00000488937 RPIAP49247 311 aa7.61□□□□□ -1.19
PRPF4-203ENST00000488937 MFSD10Q14728 455 aa7.61□□□□□ -1.19
PRPF4-203ENST00000488937 CERKQ8TCT0 537 aa7.61□□□□□ -1.19
PRPF4-203ENST00000488937 RTN4Q9NQC3 1192 aaKnown RBP7.61□□□□□ -1.19
PRPF4-203ENST00000488937 ERBB4Q15303 1308 aa7.6□□□□□ -1.19
PRPF4-203ENST00000488937 TTC24A2A3L6 582 aaPredicted RBP7.59□□□□□ -1.19
PRPF4-203ENST00000488937 MAP3K7O43318 606 aa7.59□□□□□ -1.19
PRPF4-203ENST00000488937 ADH1BP00325 375 aa7.59□□□□□ -1.19
PRPF4-203ENST00000488937 SLC4A3P48751 1232 aa7.59□□□□□ -1.19
PRPF4-203ENST00000488937 AMER1Q5JTC6 1135 aaPredicted RBP7.59□□□□□ -1.19
PRPF4-203ENST00000488937 CD2BP2O95400 341 aaKnown RBP7.58□□□□□ -1.2
PRPF4-203ENST00000488937 SWT1Q5T5J6 900 aaKnown RBP7.58□□□□□ -1.2
PRPF4-203ENST00000488937 NUDT18Q6ZVK8 323 aa7.58□□□□□ -1.2
PRPF4-203ENST00000488937 RNF225M0QZC1 329 aaPredicted RBP7.57□□□□□ -1.2
PRPF4-203ENST00000488937 SLC6A16Q9GZN6 736 aa7.57□□□□□ -1.2
PRPF4-203ENST00000488937 SMPD1P17405 629 aa7.56□□□□□ -1.2
PRPF4-203ENST00000488937 GPAT2Q6NUI2 795 aa7.55□□□□□ -1.2
PRPF4-203ENST00000488937 DDX12PQ92771 950 aa7.55□□□□□ -1.2
PRPF4-203ENST00000488937 DNAJC5Q9H3Z4 198 aa7.55□□□□□ -1.2
PRPF4-203ENST00000488937 VEGFBP49765 207 aa7.54□□□□□ -1.2
PRPF4-203ENST00000488937 CHGAP10645 457 aaKnown RBP7.52□□□□□ -1.21
PRPF4-203ENST00000488937 NBR1Q14596 966 aa7.52□□□□□ -1.21
PRPF4-203ENST00000488937 SNIP1Q8TAD8 396 aaKnown RBP7.52□□□□□ -1.21
PRPF4-203ENST00000488937 DNMT3AQ9Y6K1 912 aaPredicted RBP7.52□□□□□ -1.21
PRPF4-203ENST00000488937 RBM27Q9P2N5 1060 aaKnown RBP7.51□□□□□ -1.21
PRPF4-203ENST00000488937 LCE3BQ5TA77 95 aa7.5□□□□□ -1.21
PRPF4-203ENST00000488937 FOXK2Q01167 660 aa7.49□□□□□ -1.21
PRPF4-203ENST00000488937 ACTN4O43707 911 aaKnown RBP7.48□□□□□ -1.21
PRPF4-203ENST00000488937 ADAM23O75077 832 aa7.47□□□□□ -1.21
PRPF4-203ENST00000488937 NR1I2O75469 434 aa7.47□□□□□ -1.21
PRPF4-203ENST00000488937 VSIG8P0DPA2 414 aa7.47□□□□□ -1.21
PRPF4-203ENST00000488937 WNT7AO00755 349 aa7.46□□□□□ -1.22
PRPF4-203ENST00000488937 DPYSL4O14531 572 aa7.45□□□□□ -1.22
PRPF4-203ENST00000488937 NKX1-1Q15270 411 aaPredicted RBP7.44□□□□□ -1.22
PRPF4-203ENST00000488937 HPS1Q92902 700 aa7.44□□□□□ -1.22
PRPF4-203ENST00000488937 J3QL48 77 aa7.43□□□□□ -1.22
PRPF4-203ENST00000488937 KMT5BQ4FZB7 885 aa7.43□□□□□ -1.22
PRPF4-203ENST00000488937 CAMK2BQ13554 666 aa7.42□□□□□ -1.22
PRPF4-203ENST00000488937 ADAMTS8Q9UP79 889 aa7.42□□□□□ -1.22
PRPF4-203ENST00000488937 TTC13Q8NBP0 860 aa7.41□□□□□ -1.22
PRPF4-203ENST00000488937 FCF1Q9Y324 198 aaKnown RBP7.41□□□□□ -1.22
PRPF4-203ENST00000488937 SPSB2Q99619 263 aa7.39□□□□□ -1.23
PRPF4-203ENST00000488937 KRTAP9-9Q9BYP9 154 aa7.39□□□□□ -1.23
PRPF4-203ENST00000488937 KRTAP9-4Q9BYQ2 154 aa7.39□□□□□ -1.23
PRPF4-203ENST00000488937 BTBD11A6QL63 1104 aa7.38□□□□□ -1.23
PRPF4-203ENST00000488937 SCUBE3Q8IX30 993 aa7.38□□□□□ -1.23
PRPF4-203ENST00000488937 EYA1Q99502 592 aa7.38□□□□□ -1.23
PRPF4-203ENST00000488937 KRTAP4-12Q9BQ66 201 aa7.38□□□□□ -1.23
PRPF4-203ENST00000488937 KRTAP4-8A0A0G2JLE6 195 aa7.37□□□□□ -1.23
PRPF4-203ENST00000488937 Q8N3U1 123 aa7.37□□□□□ -1.23
PRPF4-203ENST00000488937 MRGPRX2Q96LB1 330 aa7.37□□□□□ -1.23
PRPF4-203ENST00000488937 TRIM46Q7Z4K8 759 aa7.36□□□□□ -1.23
PRPF4-203ENST00000488937 ZBTB24O43167 697 aaPredicted RBP7.35□□□□□ -1.23
PRPF4-203ENST00000488937 CFHP08603 1231 aa7.34□□□□□ -1.23
PRPF4-203ENST00000488937 PRIM1P49642 420 aaKnown RBP7.34□□□□□ -1.23
PRPF4-203ENST00000488937 KANK3Q6NY19 840 aa7.34□□□□□ -1.23
PRPF4-203ENST00000488937 BMP1P13497 986 aa7.33□□□□□ -1.24
PRPF4-203ENST00000488937 IRS1P35568 1242 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms